Nucleotide Global Alignment
Description
- Query:
- TRCN0000478144
- Subject:
- XR_001738727.2
- Aligned Length:
- 3740
- Identities:
- 1852
- Gaps:
- 1886
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGCGAGAAAAGCAAACCCAACCCGTCGGGGCCGCCGCTCCGGACCCGCAGCCGCCGCCGCCGCCTCCTCCCC 74
Query 1 -------------------------------------------------------------------ATGACAC 7
|||||||
Sbjct 75 CCGGATCGGGTGTACTGTCCCAACCCGAAAGTCCAGTTCTGCGGCCCGGCAGCGGCGAGCGGGCGCGATGACAC 148
Query 8 AGGAGTACGACAACAAACGGCCAGTGTTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGGCGGTCCTACACT 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGAGTACGACAACAAACGGCCAGTGTTGGTTCTTCAGAATGAAGCACTTTATCCACAGCGGCGGTCCTACACT 222
Query 82 AGTGAGGATGAGGCCTGGAAATCCTTCCTGGAAAACCCTCTCACTGCAGCGACCAAAGCGATGATGAGCATCAA 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGTGAGGATGAGGCCTGGAAATCCTTCCTGGAAAACCCTCTCACTGCAGCGACCAAAGCGATGATGAGCATCAA 296
Query 156 TGGAGATGAAGACAGCGCCGCTGCGCTGGGCCTGCTCTATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCAT 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGAGATGAAGACAGCGCCGCTGCGCTGGGCCTGCTCTATGACTACTACAAGGTTCCAAGAGAGAGAAGGTCAT 370
Query 230 CAACAGCAAAGCCAGAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGAAACAGCATACCAATTGTGACAGAG 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAACAGCAAAGCCAGAGGTGGAGCACCCTGAGCCAGATCACAGCAAAAGAAACAGCATACCAATTGTGACAGAG 444
Query 304 CAGCCCCTCATCTCTGCTGGAGAAAACAGAGTGCAAGTACTGAAAAATGTGCCATTTAACATTGTCCTTCCCCA 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGCCCCTCATCTCTGCTGGAGAAAACAGAGTGCAAGTACTGAAAAATGTGCCATTTAACATTGTCCTTCCCCA 518
Query 378 TGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGATACGACAGTCACTGTCTCCATAGCAA 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCAGATACGACAGTCACTGTCTCCATAGCAA 592
Query 452 CGATGCCTACCCACTCCATCAAGACAGAAACCCAGCCACATGGCTTCGCTGTGGGAATCCCCCCAGCAGTGTAT 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGATGCCTACCCACTCCATCAAGACAGAAACCCAGCCACATGGCTTCGCTGTGGGAATCCCCCCAGCAGTGTAT 666
Query 526 CATCCTGAGCCCACTGAGCGGGTGGTGGTTTTCGATCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGCTCA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CATCCTGAGCCCACTGAGCGGGTGGTGGTTTTCGATCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGCTCA 740
Query 600 AGCCCCAAATGCTCAAAGGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGTTT 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCCCCAAATGCTCAAAGGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGTTT 814
Query 674 TCTTCCCCTCGGATCTCAGTCTGCGGATGCCTGGCATGAATTCAGAGGACTATGTTTTTGACAGTGTTTCTGGG 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCTTCCCCTCGGATCTCAGTCTGCGGATGCCTGGCATGAATTCAGAGGACTATGTTTTTGACAGTGTTTCTGGG 888
Query 748 AACAACTTTGAATATACCCTAGAAGCTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCT 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACAACTTTGAATATACCCTAGAAGCTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCT 962
Query 822 GAACAAAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATCATCCCATCAGCA 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAACAAAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATCATCCCATCAGCA 1036
Query 896 AAGTTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAAGTAC 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGTTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAAGTAC 1110
Query 970 TGGCACTCCCGGCAGCACACCGCTAAACAAAGATGCATTGACATAGCTGACTATAAAGAAAGCTTCAACACTAT 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGGCACTCCCGGCAGCACACCGCTAAACAAAGATGCATTGACATAGCTGACTATAAAGAAAGCTTCAACACTAT 1184
Query 1044 CAGTAACGTCGAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTTTTCA 1117
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAGTAACATCGAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTTTTCA 1258
Query 1118 TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAATT 1191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1259 TCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTT 1332
Query 1192 GATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTGCACCGGGCCTACTGCCAGATCAAGGTCTTCTGTGA 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTGCACCGGGCCTACTGCCAGATCAAGGTCTTCTGTGA 1406
Query 1266 CAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAAGCAAAGCAAAAGAAAAGTTTCTGATGTTAAAGTGC 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAAGCAAAGCAAAAGAAAAGTTTCTGATGTTAAAGTGC 1480
Query 1340 CACTGCTTCCCTCTCACAAGCGAATGGATATCACAGTTTTCAAACCCTTCATTGATCTCGATACTCAGCCTGTC 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CACTGCTTCCCTCTCACAAGCGAATGGATATCACAGTTTTCAAACCCTTCATTGATCTCGATACTCAGCCTGTC 1554
Query 1414 CTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACTCAT-------------------------- 1461
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACTCATGTAGGTAACCAGGATCCCAGGGGAGG 1628
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1629 TTACCAGGAAGGAAGGCATGGCAAAAGGAAATTCTTTGGCATTATTCATGGGAAACAGAAGCCAAAATTGAGTG 1702
Query 1462 ----------------------------------------------------------------------GTCC 1465
||||
Sbjct 1703 AGGTTTGACCAGTTAGTCAGCTCTTTGGAATATTCTGCTGGGGTGACATGATGCCCGTGCAATAAAAATGGTCC 1776
Query 1466 TTCCCATTGCCTCTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAGAAGATGAC 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TTCCCATTGCCTCTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAGAAGATGAC 1850
Query 1540 TTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGA 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGA 1924
Query 1614 GTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACA 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACA 1998
Query 1688 AATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGAC 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGAC 2072
Query 1762 GACAACATTGTGAAGCATTACTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGGGGGGTCTTACAA 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GACAACATTGTGAAGCATTACTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGGGGGGTCTTACAA 2146
Query 1836 GCTCACCCTGACGGAGATC------------------------------------------------------- 1854
|||||||||||||||||||
Sbjct 2147 GCTCACCCTGACGGAGATCTAAAGGCCTGCGGGCCACAGCTCCCCAGGAGTTCAGTGCAGGTGTTTCTAGATCT 2220
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2221 TACGGTTTGGCAACTGCAGGTAACCCCAGTCAGCCATGTCGCCAGCACAGGTCTATGTCGAGGGAATGGGTTCC 2294
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2295 TTGCAGGTTGGAGGCGGGGCTGCATCTGGCTTGGTGGTAGCATTTAATCTATTGCATTGGTGTTTTTCAGATGA 2368
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2369 AAGAGAAATCCATATACCATTATGTTTGAATTTCCTGATATATACAGGATTTAAAGTGAAAACTTTATTCCAAG 2442
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2443 AGTTAACAGAGTCTCTGGGAAGCTTTAGGACATCTGCTACGTTATTTATCAAAATATTGGGATCTCTGCCTTGT 2516
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2517 GCCTACAGTGTCGTGGGCCTGCTCGCTAGCAGAAGTCAGAAAAGGCGATAGGCTTGGCTTTAAGGATTTCGTGC 2590
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2591 CCTTGCCTGAATTCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTACGGGGGGAGCCCT 2664
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2665 CTCTCCCTTACCCTCTCACTCTCCACCAGATGTTTACTAAACAGGGCATGTTACTGAAATCTTCCTTTGCGACT 2738
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2739 TTCTCGGACATATCAACTGCCTTTCTCATGAAGAATTTTAATGGGTTACAGTATGAAATCAGTTAAGATAAAGC 2812
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2813 TGCATTGTATATAAGTGCAATATATTTTTGAAGGTCTGTAAATGTGTACATACATGTCTTATATAAATATATAA 2886
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2887 TATATAAATATGGTGTCTGTGTACATATAGTGAAGATATGCAGTAAGAGCTACCTTAAAGACTTTCCCTAGACA 2960
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 2961 AAGGTTAAGTTATTTTTTGATCGTGTATACCAAGCAGATAGAATACTGTGCTTAGTGGAACCCGCTAAAAACCT 3034
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3035 TTTTCTCTGTTTTTCCAAACACAGGCATTCTGTAGCATAGCAAAACCTTCTCAAATGACAGAGATTCTGTTTGC 3108
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3109 TGTTGAGAATGTTGTTATTTGGATTTCTGCACTGTTTAACAAATGAAGTAAAAGAAAAACACTACTGCAATCAC 3182
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3183 GTCTTTTGTTATGCTAGTATCAGTCAGATGCACTTAGAGTGAAGAAACACTGTAATTACAGCACACAGATTGCA 3256
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3257 AGTATTGCGTACCAAGTGATACAACTCGAAATGCAGTTCTCATCTTCCTGTTTTGAGAAATGATTATTTTATCA 3330
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3331 CGCATCAGAGCCTTCGTGCTTTGATTATCTTGTATGTTAACAATTCTAGAAAACATTCATGAATTCACAAAAAT 3404
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3405 ATGTTACTATGGCAGGGGAACATTTTGTACACATTTAAGTATATAAAAATACTAAAATATGTAATTTTATAACA 3478
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3479 AAGTCACGGGTATCTTTAGGTTCAGGGAACTAGACTAGGTCATTCGTGTAAATGGACTGGTAGTTACAGTCTTA 3552
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3553 GGTTAAAGTATTCTAATGAAGTATGGGAACTAAATTGCTGGTTTTCTAAGATAAGATATGGGATATGGGTCATA 3626
Query 1855 -------------------------------------------------------------------------- 1854
Sbjct 3627 TAACTTTTGTATTTTTTATGAAGTTGATTTTGTCTTGCGTGTTATTTTTAATTGTATCATTGAAGATGTATTTT 3700
Query 1855 ---------------------------------------- 1854
Sbjct 3701 AAACCAAAGGAATTAAATTTTATATGTCTATTTCGTAATA 3740
