Nucleotide Global Alignment
Description
- Query:
- TRCN0000478308
- Subject:
- XM_017026187.1
- Aligned Length:
- 2023
- Identities:
- 1148
- Gaps:
- 695
Alignment
Query 1 ---------------------------------------------------ATGATCCCCACCTTCACGGCTCT 23
||||.|||||.|.||||||..||
Sbjct 1 ATGCACCGAGGGCTCATCCATCCACAGAGCAGGGCAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCT 74
Query 24 GCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCCCCTCCCCAAACCCACCCTCTGGG 97
|.||||.|||||||||||||||||||||.|||||.||.||||||||||||.|||||||||.|||||||||||||
Sbjct 75 GATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGG 148
Query 98 CTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTCAGGGGACCCTGGAGGCTCGGGAG 171
||||.||||||||||||||||.|..|||||...||||||||.||.|||||||||||..||.||||.|.|.||||
Sbjct 149 CTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAG 222
Query 172 TACCGTCTGGATAAAGAGGAAAG--CCCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAGAACAA-GGC 242
|||||||| |||.||||.|||| ..|||||||||||...|.||.||.|||||.|||||....|||.|| |||
Sbjct 223 TACCGTCT--ATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGC 294
Query 243 CAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTACTATCGCAG---CCCTGTAG 313
||| |||.|||||||||||||.||...|||..|..|||||.|.||.||||||||||||.|.|| |.|||.||
Sbjct 295 CAG-TTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGTTACTATGGTAGCGACACTGCAG 367
Query 314 GCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACAGTAAACCCACCCTTTCAGCCCTG 387
||.|.|||.||..||||||||||||||||||||||.|||||||||||||||..|||||||||||.|||||||.|
Sbjct 368 GCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAG 441
Query 388 -------------------------------------------------------------------------- 387
Sbjct 442 CCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCAT 515
Query 388 -------------------------------------------------------------------------- 387
Sbjct 516 TCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCCCCATGCCCGTGGGTCGTCCCGCG 589
Query 388 --------------------------CCGAGTC-------------------------------------CTCT 398
||||||| ||||
Sbjct 590 CCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCT 663
Query 399 -------------------------------------------------------------------------- 398
Sbjct 664 CCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTC 737
Query 399 -------------------------------------------------------------------------- 398
Sbjct 738 AGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAACA 811
Query 399 -------------------------------------------------------------------------- 398
Sbjct 812 GATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCTCTCC 885
Query 399 -----------------------TGTGA---------------------------------------------- 403
|||||
Sbjct 886 CAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGATGCTACGGTGCACACAACCT 959
Query 404 -------------------------------------------------------------------------- 403
Sbjct 960 CTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACAGTTCTATGACAGAGTCTCCC 1033
Query 404 ---------------------------CCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATG 450
||||||||.|||.|||||||||||||||||||||||.|.| |||
Sbjct 1034 TCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGG----ATG 1103
Query 451 G----ACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTC 520
| |.|||||||||||||.|||||||.|||||||..||..||.|..||.|||.||||||..|.||..|.|||
Sbjct 1104 GATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTC 1177
Query 521 AGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCA 594
|..|..||||||||||||||||||||.|||||||||||||||..||.|.|||||||||||||||||.|.|||||
Sbjct 1178 AAAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCA 1251
Query 595 CACGGCTTCTCCCA----CTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TG 663
||..||| ||| ||||||||||.|.||||||||||||||||||||||||.|.|||||||||.|.| ||
Sbjct 1252 CAGAGCT----CCAAACCCTACCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTG 1321
Query 664 GAGGGTCCCAGGCCCTCACCCACAA---GGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCC 734
| |||.||||| |||.||.|||| |..||..|||.|||.|||||||||||||||||||||||||||..||
Sbjct 1322 G-GGGCCCCAG---CTCCCCGACAACAGGCCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCC 1391
Query 735 TACAGGGTCAGTCCCCCACAGTGGTCTGAGAAGGCA-CTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATC 807
.||.|||||.|..|||||.|||||||||.||||||| ||||| |||..|||||||..|||||||||.|..||||
Sbjct 1392 CACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGG-GGTTGTGATCGGCATCTTGGTGGCCGTCATC 1464
Query 808 CTGCTTCT-CTC-----CCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGC 875
||.||.|| ||| ||||||||||||||||.||||||.|||..|.||||||||.||||||.||||||.|.|
Sbjct 1465 CTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGAC 1538
Query 876 CCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGA 949
|||||||.|||||||||||||||.||||.|||||||||..|.|||||||||||..|||.|.|||||.|||.|||
Sbjct 1539 CCAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGA 1612
Query 950 GGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGG 1023
||||||||||||||||.||.|.|||||.|||||||.|||.|||||||||||||.||||||||||||||||.|||
Sbjct 1613 GGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGG 1686
Query 1024 GTGGAAATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTC 1097
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1687 GTGGAGATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTC 1760
Query 1098 CAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1171
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1761 CAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGG 1834
Query 1172 CAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTG 1245
|.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1835 CGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTG 1908
Query 1246 CACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAG 1319
||||||||.||||||||||.|.||||||||||||||||||||||||||||||||.||||||||||||.||||||
Sbjct 1909 CACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAG 1982
Query 1320 TGTCTATGCCACTCTGGCCATCCAC 1344
..||||.||||||||||||||||||
Sbjct 1983 CATCTACGCCACTCTGGCCATCCAC 2007
