Nucleotide Global Alignment

Description

• Query: TRCN0000478445
• Subject: XM_017021722.2
• Aligned Length: 3326
• Identities: 2233
• Gaps: 688

Alignment

Query    1  ATGGTGGACTACCA--------CGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCT  66
            ||||      ||||        |.|.||.|||||                                        
Sbjct    1  ATGG------ACCATTATGATTCTCAGCAAACCA----------------------------------------  28

Query   67  GGCGGCGGGGGCAGCATGGGCGACTACATGGCCCAG---GAGGACGACTGGGACCGGGACCTGCTGCTGGACCC  137
                               .|||.||||||   |||   ||.||.||||||||||||||||||||.||||||||
Sbjct   29  -------------------ACGATTACATG---CAGCCAGAAGAGGACTGGGACCGGGACCTGCTCCTGGACCC  80

Query  138  GGCCTGGGAGAAGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGA  211
            |||||||||||||||||||.|.|||||.||||||||||||||.|||||||||||.||||||||.||.|||||||
Sbjct   81  GGCCTGGGAGAAGCAGCAGAGAAAGACATTCACGGCATGGTGTAACTCCCACCTCCGGAAGGCGGGGACACAGA  154

Query  212  TCGAGAACATTGATGAGGACTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGAGGTCATATCAGGGGAGCGG  285
            ||||||||||.||.|||||||||||.||.||.||.||||||||||||||.|||||||||||.|||||.||.||.
Sbjct  155  TCGAGAACATCGAAGAGGACTTCCGGGATGGCCTGAAGCTCATGCTGCTGCTGGAGGTCATCTCAGGTGAACGC  228

Query  286  TTACCTAAGCCGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTGC  359
            ||..|.|||||.|||||.||.|||||||||||||||||.|||..|||.||.|||||.||.|||||.||.||.||
Sbjct  229  TTGGCCAAGCCAGAGCGAGGCAAGATGAGAGTGCACAAGATCTCCAACGTCAACAAGGCCCTGGATTTCATAGC  302

Query  360  CAGCAAAGGCGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAACGCAAAGATGACCCTGGGAA  433
            |||||||||||||||.|||||.||||||||.||.|||||.||.|||||.||.||.|..||||||||||||||.|
Sbjct  303  CAGCAAAGGCGTCAAACTGGTGTCCATCGGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCA  376

Query  434  TGATCTGGACCATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGACCTCGGCCAAGGAAGGGCTC  507
            |||||||||||||||||||..|.||.|||||||||||||||||||||||||||||.||.||||||||||||||.
Sbjct  377  TGATCTGGACCATCATCCTGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGAAGGGCTG  450

Query  508  CTTCTCTGGTGCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGA  581
            ||.||.|||||.|||||||||||||||||.||.||.||.|||||..|.||||||||||||||.|||||||||||
Sbjct  451  CTCCTGTGGTGTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTCCACATAAGCTGGAAGGA  524

Query  582  TGGTCTTGCCTTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGGACG  655
            |||.||.|.||||..|||..||||||||||.|||.|.||.|||||||||||.||.|..||||||.|||||||.|
Sbjct  525  TGGCCTCGGCTTCTGTGCTTTGATCCACCGACACCGGCCCGAGCTGATTGACTACGGGAAGCTGCGGAAGGATG  598

Query  656  ACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCA  729
            |.||..||||.||.|||||.|..||.||.||.|||||.|||||.|||||.|||||||||||||||||||||||.
Sbjct  599  ATCCACTCACAAATCTGAATACGGCTTTTGACGTGGCAGAGAAGTACCTGGACATCCCCAAGATGCTGGATGCC  672

Query  730  GAGGACATCGT--GAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCC  801
            ||.||||||||  ||  ||.|||||.||.||.|||||.|||||.|||||.||.|||||.|||||||||||.|||
Sbjct  673  GAAGACATCGTTGGA--ACTGCCCGACCGGATGAGAAAGCCATCATGACTTACGTGTCTAGCTTCTACCACGCC  744

Query  802  TTTTCAGGAGCGCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGGCTGTCAACCAAGAGAACGA  875
            ||.||.|||||.||||||||.||.||.||.|||||.||.|||||.||||||.||||.||||||||.||||||||
Sbjct  745  TTCTCTGGAGCCCAGAAGGCGGAGACAGCAGCCAATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGA  818

Query  876  GCACCTGATGGAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGG  949
            |||.||.|||||.||||||||||||||||||||.||.||..|||||||||||||.|||||.|||||.|||||||
Sbjct  819  GCAGCTTATGGAAGACTACGAGAAGCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTGG  892

Query  950  AGGACCGTGTGCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGTGTG  1023
            ||.||||.||||||.|.||.||.||.||.|..|||||.||||||||||||||||||||.|||||||||||..||
Sbjct  893  AGAACCGGGTGCCCGAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACTACCGGCGCCTG  966

Query 1024  CACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGCCT  1097
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  967  CACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGGCT  1040

Query 1098  CAGCAACCGGCCCGCCTTCATGCCCTCCGAGGGCAAGATGGTCTCGGACATCAACAATGGCT--GGCAGCACTT  1169
            ||||||||||||.||||||||||||||.|||||||.|||||||||||||||||||||||.||  |||.|  |.|
Sbjct 1041  CAGCAACCGGCCTGCCTTCATGCCCTCTGAGGGCAGGATGGTCTCGGACATCAACAATGCCTGGGGCTG--CCT  1112

Query 1170  GGAGCAGGCTGAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTGGAGCGGCTCGACCACCTGG  1243
            ||||||||..|||||||||||.|||||||||.||||||||||||||||.|||||||||||.||.||||||||||
Sbjct 1113  GGAGCAGGTGGAGAAGGGCTATGAGGAGTGGTTGCTGAATGAGATCCGGAGGCTGGAGCGACTGGACCACCTGG  1186

Query 1244  CAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGAC------------------------GGG  1293
            |||||||||||||||||||||||||||||||||||||||||||||||                        ||.
Sbjct 1187  CAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGCCATGTGGCCCTCTCTCAACCCAGGC  1260

Query 1294  AAGGAAGCCATGCTGAAGCACCGGGACTACGAGACGGCCACACTATCGGACATCAAAGCCCTCATTCGC-----  1362
            ||.||.|||||||||...||...||||||.|||||.|||||.||.|||||.|||||.|||||     ||     
Sbjct 1261  AAAGAGGCCATGCTGCGACAGAAGGACTATGAGACCGCCACCCTCTCGGAGATCAAGGCCCT-----GCTCAAG  1329

Query 1363  AAGCACGAGGCCTTCGAGAGCGACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGA  1436
            |||||.||||||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||.||.|||||
Sbjct 1330  AAGCATGAGGCCTTCGAGAGTGACCTGGCTGCCCACCAGGACCGTGTGGAGCAGATTGCCGCCATCGCACAGGA  1403

Query 1437  GCTCAACGAGCTGGATTACTACGACTCCCACAATGTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACG  1510
            ||||||.||||||||.||.||.|||||.|.||.|||||||.||||.|||||.|||||||||||||||||||||.
Sbjct 1404  GCTCAATGAGCTGGACTATTATGACTCACCCAGTGTCAACGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACA  1477

Query 1511  CCCTCGGCTCTCTGACACATAGTCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAG  1584
            ..||.||..|.||.||.||.|..||.||||||||.||||||...||.|||||.|.|||||||.||||.||||||
Sbjct 1478  ATCTGGGGGCCCTAACTCAGAAGCGAAGGGAAGCTCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAG  1551

Query 1585  CTGCACCTGGAATACGCCAAGCGCGCGGCCCCCTTCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGA  1658
            |||.||.||||.||.||||||||.||.||.|||||||||||||||||||||.|.||||||||||||||.|||||
Sbjct 1552  CTGTACTTGGAGTATGCCAAGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGA  1625

Query 1659  CATGTTCATCGTCCATACCATCGAGGAGATTGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGC  1732
            ||..|||||.||.||.|||||.||||||||..||||.||||.|.||||||||||.|||||||||.|||||||.|
Sbjct 1626  CACCTTCATTGTGCACACCATTGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTCC  1699

Query 1733  CGGACGCCGATAGGGAGCGCGAGGCCATCCTGGCCATCCACAAGGAGG---CCCAGAGGATCGCTGAGAGCAAC  1803
            |.||.|||||.|.|||||||..|||||||||||.|||||||||.||||   ||   |.|||.|...|||.|.||
Sbjct 1700  CTGATGCCGACAAGGAGCGCCTGGCCATCCTGGGCATCCACAATGAGGTGTCC---AAGATTGTCCAGACCTAC  1770

Query 1804  CACATCAAGCTGTCGGGCAGCAACCCCTACACCACCGTCACCCCGCAAATCATCAACTCCAAGTGGGAGAAGGT  1877
            |||.||||..||.||||||.||||||||||||.|||.||||.||.||....|||||...|||.|||||..|.||
Sbjct 1771  CACGTCAATATGGCGGGCACCAACCCCTACACAACCATCACGCCTCAGGAGATCAATGGCAAATGGGACCACGT  1844

Query 1878  GCAGCAGCTGGTGCC----AAAACGGGACCATGCCCTCCTGGAGGAGCA-----GAGCAAGCAGCAGTCCAACG  1942
            ||.||||||||||||    |    |||||||.||.||...|||||||||     ||     ||||||..|||.|
Sbjct 1845  GCGGCAGCTGGTGCCTCGGA----GGGACCAAGCTCTGACGGAGGAGCATGCCCGA-----CAGCAGCACAATG  1909

Query 1943  AGCACCTGCGCCGCCAGTTCGCCAG-CCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGAT  2015
            ||...||.|||...|||||.| .|| ||||||||||||..|.||||||||||||||||||||||||||||||||
Sbjct 1910  AGAGGCTACGCAAGCAGTTTG-GAGCCCAGGCCAATGTCATCGGGCCCTGGATCCAGACCAAGATGGAGGAGAT  1982

Query 2016  CGGGCGCATCTCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGA-ACGCAGC  2088
            ||||.|.|||||||||||||||.|.||||||||||||||||||||.|||||||||..||||||||| |.| |||
Sbjct 1983  CGGGAGGATCTCCATTGAGATGCATGGGACCCTGGAGGACCAGCTCAGCCACCTGCGGCAGTATGAGAAG-AGC  2055

Query 2089  ATCGTGGACTACAAGCCCAACCTGGACCTGCTGGAGCAGC-AGCACCAGCTCATCCAGGAGGCCCTCATCTTCG  2161
            |||||..||||||||||.||..|.||.|.||||||| .|| |.||||||||||||||||||||.||||||||||
Sbjct 2056  ATCGTCAACTACAAGCCAAAGATTGATCAGCTGGAG-GGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCG  2128

Query 2162  ACAACAAGCACACCAACTATACCATGGAGCACATCCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGC  2235
            |||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||.|.
Sbjct 2129  ACAACAAGCACACCAACTACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGG  2202

Query 2236  ACCATCAACGAGGTGGAGAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTT  2309
            ||||||||.|||||.||||||||||||||.|||||.||.|||||||||||||||||||||||||||.|.|||||
Sbjct 2203  ACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTT  2276

Query 2310  CCGGGCGTCCTTCAACCACTTCGACAAGGATCATGGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCA  2383
            ||||||.||||||||||||||.|||..||||||...|||..|.|||||.||||||||||||||.||||||||||
Sbjct 2277  CCGGGCCTCCTTCAACCACTTTGACCGGGATCACTCCGGCACACTGGGTCCCGAGGAGTTCAAAGCCTGCCTCA  2350

Query 2384  TCAGCCTG------------GGCTACGAC--------------------------------------GTGG---  2404
            |||||.||            |||.|||||                                      ||||   
Sbjct 2351  TCAGCTTGGGTTATGATATTGGCAACGACCCCCAGGTACTCGCCTCCTGCATGGAGCACGCTCAGGGGTGGCGT  2424

Query 2405  --------AGAA--------------------------------------------------------------  2408
                    ||||                                                              
Sbjct 2425  CTGGGGCAAGAAATAATGCGTTTTTCCTTTTTCTCTTCTCTCTGTCTGGATCTCCTGTCCCCCTCCTGTGGGCC  2498

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2499  ATGGGGCTCGTCCTCTCCTGCTGTCTCTGTCTGCCCCATCACTGGTCCACCCTCTGCCCTCTGCTGTCTTTCAT  2572

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2573  GGCAACCTACTGGGTGCCCGCTGTCTTCCGTCCTCGCTGCTCTTCATCCCATGGGTGGATTTTTGCATCTCCCT  2646

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2647  GCTCTGTCTTCCTCCTGTCTTTGGACATTTCCACCGATGTGTGTTCGCATCTTCTCCTATGTTCCTTTACCTAT  2720

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2721  CCTGACCCCCAAAACCATAAATCTCATCCCCGTTCTGGCCATCTGTTCCTGTCTTCCTGGCCCCGGGCCGGCCC  2794

Query 2409  ------------------CGACC------------------------------------------GGCA-----  2417
                              |||||                                          ||||     
Sbjct 2795  TTCCTCTTCCTGCCTTCCCGACCCTCCTTGTGTCTTGGTACCACTGCCCCCCACAGAAGAAGACAGGCATGATG  2868

Query 2418  -----------------------------------------------GGGTGAGGCCGAGTTCAACCGCATCAT  2444
                                                           |||.||.||.||.||...|||||||||
Sbjct 2869  GACACGGATGATTTCCGCGCCTGCCTGATCTCCATGGGTTACAACATGGGAGAAGCAGAATTTGCCCGCATCAT  2942

Query 2445  GAGCCTGGTCGACCCCAACCATAGC---GGCCTTGTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGA  2515
            ||||.|.||.||||||||||   ||   ||..|.|||||.|||||.||||||||.|||||||||||.||.||||
Sbjct 2943  GAGCATTGTGGACCCCAACC---GCCTGGGGGTAGTGACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAGA  3013

Query 2516  CCACCGACACGGACACGGCTGACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAAGAACTTCATCACA  2589
            |..|||||||.||.||.||.|||||.|||||.||||||||||||.||.|.||.|||||||||||||.|||.||.
Sbjct 3014  CAGCCGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCTGGGGACAAGAACTACATTACC  3087

Query 2590  GCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGG  2663
            ...||.||||||||..|.||||||||.|||||||||||.||||||||||||||.||.|||||.||.|||...||
Sbjct 3088  ATGGACGAGCTGCGCCGCGAGCTGCCACCCGACCAGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGG  3161

Query 2664  CCCTGACGCCGTGCCCGGTGCCCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTG  2733
            |||.|||.|||||||.|||||.||.|||||||.|||||||||||||||..||||.||||||||.|||||.
Sbjct 3162  CCCCGACTCCGTGCCAGGTGCTCTGGACTACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTC  3231