Nucleotide Global Alignment
Description
- Query:
- TRCN0000478908
- Subject:
- XR_001781084.1
- Aligned Length:
- 5850
- Identities:
- 968
- Gaps:
- 4791
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCCTGTGGGAAGGAAGGGCTGCAGCTCACAGCAACAGAGTTTAGACTGTCTTTGCTTCATCATCTGAAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAATTTTCCAGCCACGGCCGGCGGCTCGCAGAGTACAATAAACAGGGACGGAGAACTATTTGCATGGACCCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCCTCATGATGCGGTGGAGAAGCCACGGCCACTCGGTCCTGCCAGATGTTCTTGGGGTTACTGTACATGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGACGAGCAGAGCTAAACAAGAATTTAAAGAGGACGAAGGAAGGAAAGCGCCATCCTGCTCAAATACAAAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTAAGAGGGTTGTTTTCCCACATCCTCCAAAGCTGTGAGCATTAGAACTAATATTTTCCCAAAGAGTGCCATCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TATTAAAGCCACTTTATTAAGGAGGGGTGTATCTGCAAAACAGTCAAGAGACTAGAACCCTGGGAGCCAGAGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACAGTGAGCACGCACTGCTTGTGGCTCACAGTCTTCCAGTGGGGCCTATCGATCGGTGACTGACTTCCTGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGACACATTCCCCCTCCCCGGTTTCCTGGATTGGACTGCATTAAAGAATTCACTGCTTACCTTCAAACTTAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGTTGGAGTTTTCACGGCGGTTGTTTTGAGATCATTGAGACTCGGATTGATTTCGACATTTAACCGAAAGGAA 666
Query 1 -----------------------ATGGCTTTGAACGTTGCCCCAGTCAGAGATACAAAATGGCTGACATTAGAA 51
|||||.||||||||||||||.||.|||||.|||||.||||||||..|.||.
Sbjct 667 CAGAGCCCAAAGTAGTTCTCATCATGGCCTTGAACGTTGCCCCCGTGAGAGACACAAAGTGGCTGACGCTGGAG 740
Query 52 GTCTGCAGACAGTTTCAAAGAGGAACATGCTCACGCTCTGATGAAGAATGCAAATTTGCTCATCCCCCCAAAAG 125
|||||||||||||..||.||||||||.|||||||||||.||.|||||||||||.||||||||.|||||||||||
Sbjct 741 GTCTGCAGACAGTACCAGAGAGGAACGTGCTCACGCTCCGACGAAGAATGCAAGTTTGCTCACCCCCCCAAAAG 814
Query 126 TTGTCAGGTTGAAAATGGAAGAGTAATTGCCTGCTTTGATTCCCTAAAGGGCCGTTGTTCGAGAGAGAACTGCA 199
|||.|||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||
Sbjct 815 TTGCCAGGTTGAAAATGGAAGAGTAATTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAAGAGAGAACTGCA 888
Query 200 AGTATCTTCACCCTCCGACACACTTAAAAACTCAACTAGAAATTAATGGAAGGAACAATTTGATTCAGCAAAAA 273
|.||||||||.||||||||||||||||||||.||.|||||.||||||||.||||||||||||||.|||||||||
Sbjct 889 AATATCTTCATCCTCCGACACACTTAAAAACCCAGCTAGAGATTAATGGGAGGAACAATTTGATCCAGCAAAAA 962
Query 274 ACTGCAGCAGCAATGCTTGCCCAGCAGATGCAATTTATGTTTCCAGGAACACCACTTCATCCAGTGCCCACTTT 347
|||||||||||.||||||||||||||||||||||||||||||||||||||.||.||.|||||.|||||||||||
Sbjct 963 ACTGCAGCAGCGATGCTTGCCCAGCAGATGCAATTTATGTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTT 1036
Query 348 CCCTGTAGGTCCCGCGATAGGGACAAATACGGCTATTAGCTTTGCTCCTTACCTAGCACCTGTAACCCCTGGAG 421
.||||||||||||.|.||||||||||||.|||||||||||||||||||||||.||||.|||||.||||||||||
Sbjct 1037 TCCTGTAGGTCCCACCATAGGGACAAATGCGGCTATTAGCTTTGCTCCTTACTTAGCGCCTGTCACCCCTGGAG 1110
Query 422 TTGGGTTGGTCCCAACGGAAATTCTGCCCACCACGCCTGTTATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG 495
|||||||.||||||||.||..||||.|||||.||.||.||.|||||||||||||||||||||||||||||||||
Sbjct 1111 TTGGGTTAGTCCCAACAGAGGTTCTACCCACTACACCGGTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG 1184
Query 496 GGCTCAACTGCAACTCAGAAACTTCTCAGGACTGACAAACTGGAGGTATGCAGGGAGTTCCAGCGAGGAAACTG 569
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTGGAGGTATGCAGGGAGTTCCAGCGAGGAAACTG 1258
Query 570 TGCCCGGGGAGAGACCGACTGCCGCTTTGCACACCCCGCAGACAGCACCATGATCGACACAAGTGACAACACCG 643
|||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||..||||||||||
Sbjct 1259 TGCCCGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCG 1332
Query 644 TAACCGTTTGTATGGATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCAAATATTTTCACCCTCCTGCACAC 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TAACCGTTTGTATGGATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCAAATATTTTCACCCTCCTGCACAC 1406
Query 718 TTGCAGGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCAAGCTGCGGTGGCCGCCCAGGCAGCCGCGGCCGC 791
|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct 1407 TTGCAGGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGCCCAGGCAGCCGCGGCCGC 1480
Query 792 GGCCACAGTCATGGCCTTTCCCCCTGGTGCTCTTCATCCTTTACCAAAGAGACAAGCACTTGAAAAAAGCAATG 865
||||||||||||||||||.||.||.||||||||||||||.||||||||||||||||||||||||||||||||.|
Sbjct 1481 GGCCACAGTCATGGCCTTCCCTCCGGGTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTGAAAAAAGCAACG 1554
Query 866 GTACCAGCGCGGTCTTTAACCCCAGCGTCTTGCACTACCAGCAGGCTCTCACCAGCGCACAGTTGCAGCAACAC 939
|..|||||.|||||||.||||||||||||||||||||||||||||||||.|||||.||.|||.|||||||.|||
Sbjct 1555 GGGCCAGCACGGTCTTCAACCCCAGCGTCTTGCACTACCAGCAGGCTCTGACCAGTGCGCAGCTGCAGCAGCAC 1628
Query 940 GCCGCGTTCATTCCAACAGGGTCAGTTTTGTGCATGACACCCGCTACCAGTATT-----GTACC---------- 998
.|.||||||||.||.||||||||||||||||||||||||||||||||||||||| ||.||
Sbjct 1629 ACGGCGTTCATCCCCACAGGGTCAGTTTTGTGCATGACACCCGCTACCAGTATTGGTAGGTTCCAACCTTTTTT 1702
Query 999 -------------CATGATGCACAGCGCTACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACAAGTGTC 1059
.||||||..||..| ||..||||||.| .|||.||.|
Sbjct 1703 TATTTGTCTTTTATATGATGTGCAATG------CCTTCACTGTTT-------------------GACATGTAT- 1750
Query 1060 CCCTTCGCAGCAACAGCCACAGCCAATCAGATAAT---------------TCTGAAA----------------- 1101
|| |||..|||| .|||.||| ||||||.
Sbjct 1751 ---TT--CAGAGACAG-----------TAGAGAATGCTTTAGGAAGTAGATCTGAAGGCTTAATAGCTTTAGAG 1808
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1809 TTAACGTGTAAGCTATGCTTGTGTATTTAAGAGAGTGATGGTTTTAATGTGACCTCTTAATGCTAGAACGATCA 1882
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1883 CCACAGAGACGTGAAACCACAAGTGCAAGTGTGCTTTTTAAAAAAAATGATTTGTGTTGTTTCTCTTTATAGTT 1956
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1957 TATCTGGTTTAGCATGAAGCAAGCAGAGGCAGGCTAATTTCATCAATGTTTTAAAGTTTCATAGTGGTGTGTGC 2030
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2031 CTTTACCTCCTCTTTGCTGTGTGTTAGAGTTATCAGAGTTTCCCAGAAGTATTTATTTTTGGAAAACAATTATA 2104
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2105 CTTGGATGTGTTTTGAGACCAAGTGCCTGAACTACGCTACTTACTTCTCTTTTTAGAGGGCAGACTTATTTTTA 2178
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2179 ATGGCTTTGGTTTTTTAGTTTTGTTTTTGCTTTGCTTATTTTTGTGCCTCCACGTCCATTCCCTTAGATGGGGA 2252
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2253 ATTTTAACAGTGGGGTCTTCTCTCGAATTCAGGACCTTGGCACACAAGTCTGTCTTCAGGGCAGCTGATTCATT 2326
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2327 TCACTTACAAATTCAGAAAGTCACCACTGGCAAAAATGGATCTGGTTACTTCGTAGTAACCGCTCTAGAATTTA 2400
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2401 CACCAAAGCCATTTCTCTTGCCTCACCTTTTAGTGACCGAAGTAAAACATGGAGCCACTGAAATTCCACCGTTC 2474
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2475 AGATATGCTTCCAAATTTAAGAGAAAAATGTTTTTTGGTTTAACCACAATTGATTCCAAAGTTCATCCTATTCT 2548
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2549 AAATTAGGCCCTCTGAGCCTGTGGCGTTTTGGAATTTATGATCAGTCCACTTGGTTCATTGGGTATTACCTATC 2622
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2623 ATGTATTGAGAAGCAGCTGTAGCTATCTATGGTCATGATGCCATCCTCTGAATTGGGAATAGCTCTGTTTTGAT 2696
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2697 CAAAGCGATGCGCTTTGGGCTCTCTGGGAATCACTGATTGTGTTTGAGAACTTCCTTTAACTGTACTTGTAATA 2770
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2771 AGCTATTTTCCCTTTTTATTTCTCTCCCATGCTCCCTTGCTTTGCACTGTGATCGCATGCCATCTGCTGGTTAA 2844
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2845 CCCATGATGGCTTGCTGCTCTGATATTCACCATGCCAAATACCACTTCTATTACCATAATGCTACACCCTCCTG 2918
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2919 TTCATTGCTCCCATGGTTCCCCTCCTGAAAGTACCCATGATGCACAGCGCTACGTCCGCCACTGTCTCTGCAGC 2992
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2993 AACAACTCCTGCAACAAGTGTCCCCTTCGCAGCAACAGCCACAGCCAATCAGATAATTCTGAAATAATCAACAG 3066
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3067 AAATGGAATGGAATGCCAAGAATCTGCATTGAGAATAACTAAACATTGTTACTGTACATATTACCCCGTTTCCT 3140
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3141 CCTCAATAGAATTGCCACAAACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACCCTAAGGCTAGTTCT 3214
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3215 GCTATGTCATATATGAGTATTAAATATGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACC 3288
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3289 AGCTGTGATGTTCGAAGACATACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAGGAA 3362
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3363 TATTGTCTTATCTCCATAACTATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAGAATATTTC 3436
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3437 AAATTTAGCAATAAACAGTTAGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCA 3510
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3511 CAACCATTTCATTTCCTGACTGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAG 3584
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3585 AAGTGAAGTAAAACATACGCCTGCCTCGCAGGTCTAAAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGAC 3658
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3659 ACATCAGAGTGTGGGGTTCGCTTTGCCAGGAGATGCCGCACTGAATCATGGGATTCTAGAATAACATTGCATAG 3732
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3733 ATTGAAAAAAAAAAAAAAACTTTGCACGGTATGAGCTTCATACCCAACCCAACAAAGTCTTGAAGGTATTATTT 3806
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3807 TACAAGTATATTTTTAAAGTTGTTTTATAAGAGAGACTTTGTAGAAGTGCCTAGATTTTGCCAGACTTCATCCA 3880
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3881 GCTTGACAAGAATGAAAGGCTCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTTG 3954
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3955 CCTGTTACCGAATAACTCTTCTAAACTAAAACCTAGTCAAACAGGGAAGCTGTAGGTGAGGAGGTCTGTATAAT 4028
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4029 ATTCCAGTTTAAGTACGTCTGAGTTTAGTCACTACAGATGCAAACTGTGACTTTAATCTAAATTACTATGTAAA 4102
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4103 CGAAAAAAAAAAGTAGATAGTTTCACTTTTTAAAAACTCCATTACTGTTTTTGCATTTTAAGAGTTGGATTAAA 4176
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4177 GGGTTGTAAGTAACTGCAGCATGGAAAAATAGTTCTTTTAATTCTTTCACCTTAAAGCATATTTTATGTCTCAA 4250
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4251 AAGTATAAAAAACTTTAATACAAGTACACACATATTATATATACACATACATATATATACTATATATGGATGAA 4324
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4325 ACATATTTTAATGTTGTTTACTTTTTTTAAATACTTGGTTGATCTTCAAGGTAATAGCGATACAATTAAATTTT 4398
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4399 GTTCAGAAAGTTTGTTTTAAAGTTTATTTTAAGCACTATCGTACCAAATATTTCATATTTCACATTTTATATGT 4472
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4473 TGCACATAGCCTACACAGTACCTACATAGTTTTTAAATTATTGTTTAAGAAATGAAACAGCTGTTATAAATGGA 4546
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4547 TATTATGTGTAATTGTTTAAAACATCCATTTTCTTTGTGAACATTTTAGTGATTGAAGTATTTTGACTTTTGAG 4620
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4621 ATTGAATGTAAAATATTTTAAATTTTGGTATCATCGCCTGTTCTGAAAACTAGAGGCATCCAACCATATCATTT 4694
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4695 TTTTTGATTGAAAAAAGATCTGCATTTAATTCATGTTGGTCAAAGTCTAATTACTATTTATCTTACATCATAGA 4768
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4769 TCTGATAACTGTATCGAAAAGAGAAATCACATTCTGAGTGTAATCTTGCATAGTGCTTGTGTCGTGTTTGTTTT 4842
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4843 TAATTTGTGGAAAGGTATTGTATCTAACTTGTATCACCTTGATAGTTCTCATCTTTATGTATTATTGATATTTG 4916
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4917 TAATTTCCTCAGCTATAACAATGTAGTTACGCTACAACTTGCCTAAAACACTCATACTTTTTTTTTTCTTTACT 4990
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4991 TACTCATTTAAACTCATTGAGAAGATAGTAGACTAAAAAGGTAAATTATGGGAATCACTGAAATATTTTTGTAG 5064
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5065 ACTAATTGTTGTAACTGTCCTTTCTTCCTTTCATTTCATGATTTTTATTTTAAAAATTATTAGCACATAGCTAT 5138
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5139 TTTCAGCCCTTTAATAACTGATCATCAAAACATCACCTGTATCCCCCAGCCAATATAGATGACTGTATTTTTTA 5212
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5213 CTATGATATCCATTTTCCAGAATTGTGATTATAATATGCAGAGTCAAATATGCCATTTACAATAAGGAGGAGGC 5286
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5287 CAGGCAAATGCATAGATGTACAAATATATGTACAACAGATTTTGCTTTTTATTTATTTATAATGTAATTTTATA 5360
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5361 GAATAATTCTGGGATTTGAGAGGATCTAAAACTATTTTTCTGTATAAATATTATTTGCCAAAAGTTTGTTTATA 5434
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5435 TTCAGAAGTCTGACTATGATGGATAAATCTTAAATGCTTTGTTTAATTACAAAAACAAAATCACCAATATCCAA 5508
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5509 GACAGGAAGATCTCAGTTCAACAGCTCCGGTAGTTAGGGAACTAACTCCACTTGCACAGGACTTCATTTCACTC 5582
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5583 TTGGTTTTCAGGCTATAACAGCACTTCACAGAACTATTCTTTCAGCCATACACCACTGGTCACATTTCTACTAA 5656
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5657 ATCTTTCTGTAACACTTCTTAAAGAATTCCCTCATTCGTTATCTTACAGTGTAAACAGGACTCTAATTTGTATC 5730
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5731 AATTATATGTTTTGGTTGTAATATTCAGTTCACTCACCCAATGTACAACCAATGAAATAAAAGAAGCATTTAAA 5804
Query 1102 ---- 1101
Sbjct 5805 AGGA 5808
