Nucleotide Global Alignment
Description
- Query:
- TRCN0000479140
- Subject:
- NM_001258265.1
- Aligned Length:
- 3864
- Identities:
- 358
- Gaps:
- 3465
Alignment
Query 1 ATGAAATCGTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAATCCTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
Query 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
Query 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGTAAAA 222
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.
Sbjct 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAG---AAT 219
Query 223 GCAACCAGACGCAAAGTCTT----TGGTCCGCACTTTGCTCTAC--------CAAGGCCCCGCGTTCC------ 278
||..| ||.|| ||| ||....||||.||||| ||| .||.||.|
Sbjct 220 GCTGC----------GTTTTTATATGG-CCTTGGTTTGGTCTACTTCTACTACAA-----TGCATTTCATTGGG 277
Query 279 ---TTACCGC----CCAG----CCAGTATTTATTTTG------GCTCTGCTCCATGGCCAAGGGGTCGGAAAAG 335
|||..|| |.|| || |||||.||| |||.|..||.| ||||| |||||
Sbjct 278 CAATTAAAGCATTTCAAGATGTCC----TTTATGTTGACCCCAGCTTTTGTCGA--GCCAA------GGAAA-- 337
Query 336 TGTTTC-TTGCCTTTGCTGTCCCCGTACTCTGGAATACTTCGCCCCTTGCTC----------CAGACT-CCCTT 397
||| || ||| .||||.|.|.|.||.|| |||||| |...|
Sbjct 338 ---TTCATT----------------TAC-------GACTTGGGCTCATGTTCAAAGTGAACACAGACTACAAGT 385
Query 398 CTACTCT---GAGGAA------------AAAAAAAATCGGACGC------------TTTG-GGACCGGGCTAAA 443
|||.|.| |||||| ||| |||.|| |||| .|||.| .|||
Sbjct 386 CTAGTTTAAAGAGGAAGTATCATTCTGCAAA-------GGAGGCATATGAACAACTTTTGCAGACAG---AAAA 449
Query 444 CCGGGT--CTACACCA-------CA-------TGC--CTGTTACTT---------------------------- 471
|| | ||.|||.| || ||| |.||||..|
Sbjct 450 CC---TTCCTGCACAAGTAAAAGCAACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAG 520
Query 472 -------------------------------------------------------------------------- 471
Sbjct 521 GAGACAAAGCCACAAAGGAAAGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGC 594
Query 472 -------------------------------------------------------------------------- 471
Sbjct 595 CAATCGTGGTATTTTCTTGGAAGGTGTTATTCAAGTATTGGGAAAGTTCAGGATGCCTTTATATCTTACAGGCA 668
Query 472 -------------------------------------------------------------------------- 471
Sbjct 669 ATCTATTGATAAATCAGAAGCAAGTGCAGATACATGGTGTTCAATAGGTGTGTTGTATCAGCAGCAAAATCAGC 742
Query 472 -------------------------------------------------------------------------- 471
Sbjct 743 CTATGGATGCTTTACAGGCATATATTTGTGCTGTACAATTGGACCATGGGCATGCCGCAGCCTGGATGGACCTA 816
Query 472 -------------------------------------------------------------------------- 471
Sbjct 817 GGTACTCTCTATGAATCCTGCAATCAACCTCAAGATGCCATTAAATGCTACCTAAATGCAGCTAGAAGCAAACG 890
Query 472 -------------------------------------------------------------------------- 471
Sbjct 891 TTGTAGTAATACCTCTACGCTTGCTGCAAGAATTAAATTTCTACAGAATGGTTCTGATAACTGGAATGGTGGCC 964
Query 472 -------------------------------------------------------------------------- 471
Sbjct 965 AGAGTCTTTCACATCATCCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAAATTACAGCACTTGGAA 1038
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1039 CAACTGCGAGCAAATAGAGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGTTAGAAAGTCAGTTTGT 1112
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1113 CTTAATGCAGCAAATGAGACACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCATAACGGGGCCATAACTG 1186
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1187 ATTCATCACTGCCTACAAACTCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAGAGTATCTAGCGTCTCT 1260
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1261 CAGCCTGGAGTTCGCCCTGCTTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTGCAGGCTGTATTCCTTG 1334
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1335 TGGCACATCAAAAATTCTAGGAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATAGCAGGAAGTGAAAGTA 1408
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1409 ATGGAAATGTGCCTTACCTGCAGCAAAATACACACACTCTACCTCATAATCATACAGACCTGAACAGCAGCACA 1482
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1483 GAAGAGCCATGGAGAAAACAGCTATCTAACTCCGCTCAGGGGCTTCATAAAAGTCAGAGTTCATGTTTGTCAGG 1556
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1557 ACCTAATGAAGAACAACCTCTGTTTTCCACTGGGTCAGCCCAGTATCACCAGGCAACTAGCACTGGTATTAAGA 1630
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1631 AGGCGAATGAACATCTCACTCTGCCTAGTAATTCAGTACCACAGGGGGATGCTGACAGTCACCTCTCCTGTCAT 1704
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1705 ACTGCTACCTCAGGTGGACAACAAGGCATTATGTTTACCAAAGAGAGCAAGCCTTCAAAAAATAGATCCTTGGT 1778
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1779 GCCTGAAACAAGCAGGCATACTGGAGACACATCTAATGGCTGTGCTGATGTCAAGGGACTTTCTAATCATGTTC 1852
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1853 ATCAGTTGATAGCAGATGCTGTTTCCAGTCCTAACCATGGAGATTCACCAAATTTATTAATTGCAGACAATCCT 1926
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1927 CAGCTCTCTGCTTTGTTGATTGGAAAAGCCAATGGCAATGTGGGTACTGGAACCTGTGACAAAGTGAATAATAT 2000
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2001 TCACCCAGCTGTTCATACAAAGACTGATCATTCTGTTGCCTCTTCACCCTCTTCAGCCATTTCCACAGCAACAC 2074
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2075 CTTCTCCTAAATCCACTGAGCAGAGAAGCATAAACAGTGTTACCAGCCTTAACAGTCCTCACAGTGGATTACAC 2148
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2149 ACAGTCAATGGAGAGGGGCTGGGGAAGTCACAGAGCTCTACAAAAGTAGACCTGCCTTTAGCTAGCCACAGATC 2222
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2223 TACTTCTCAGATCTTACCATCAATGTCAGTGTCTATATGCCCCAGTTCAACAGAAGTTCTGAAAGCATGCAGGA 2296
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2297 ATCCAGGTAAAAATGGCTTGTCTAATAGCTGCATTTTGTTAGATAAATGTCCACCTCCAAGACCACCAACTTCA 2370
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2371 CCATACCCACCCTTGCCAAAGGACAAGTTGAATCCACCCACACCTAGTATTTACTTGGAAAATAAACGTGATGC 2444
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2445 TTTCTTTCCTCCATTACATCAATTTTGTACAAATCCAAAAAACCCTGTTACAGTAATACGTGGCCTTGCTGGAG 2518
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2519 CTCTTAAATTAGATCTTGGACTTTTCTCTACCAAAACTTTGGTAGAAGCTAACAATGAACATATGGTAGAAGTG 2592
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2593 AGGACACAGTTGCTGCAACCAGCAGATGAAAACTGGGATCCCACTGGAACAAAGAAAATCTGGCGTTGTGAAAG 2666
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2667 CAATAGATCTCATACTACAATTGCCAAATACGCACAATACCAGGCTTCCTCCTTCCAGGAATCATTGAGAGAAG 2740
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2741 AAAATGAGAAAAGAACACAACACAAAGATCATTCAGATAACGAATCCACATCTTCAGAGAATTCTGGAAGGAGA 2814
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2815 AGGAAAGGACCTTTTAAAACCATAAAATTTGGGACCAACATTGACCTCTCTGATAACAAAAAGTGGAAGTTGCA 2888
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2889 GTTACATGAACTGACTAAACTTCCTGCTTTTGCGCGTGTGGTGTCAGCAGGAAATCTTCTAACCCATGTTGGGC 2962
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2963 ATACCATTCTGGGCATGAATACAGTACAACTGTATATGAAAGTTCCAGGGAGTCGGACACCAGGTCACCAAGAA 3036
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3037 AATAACAACTTCTGCTCTGTTAACATAAATATTGGTCCAGGAGATTGTGAATGGTTTGTTGTACCTGAAGATTA 3110
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3111 TTGGGGTGTTCTGAATGACTTCTGTGAAAAAAATAATTTGAATTTTTTAATGAGTTCTTGGTGGCCCAACCTTG 3184
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3185 AAGATCTTTATGAAGCAAATGTCCCTGTGTATAGATTTATTCAGCGACCTGGAGATTTGGTCTGGATAAATGCA 3258
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3259 GGCACTGTGCATTGGGTTCAAGCTGTTGGCTGGTGCAATAACATTGCCTGGAATGTTGGTCCACTTACAGCCTG 3332
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3333 CCAGTATAAATTGGCAGTGGAACGGTATGAATGGAACAAATTGAAAAGTGTGAAGTCACCAGTACCCATGGTGC 3406
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3407 ATCTTTCCTGGAATATGGCACGAAATATCAAAGTCTCAGATCCAAAGCTTTTTGAAATGATTAAGTATTGTCTT 3480
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3481 TTGAAAATTCTGAAGCAATATCAGACATTGAGAGAAGCTCTTGTTGCAGCAGGAAAAGAGGTTATATGGCATGG 3554
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3555 GCGGACAAATGATGAACCAGCTCATTACTGTAGCATTTGTGAGGTGGAGGTTTTTAATCTGCTTTTTGTCACTA 3628
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3629 ATGAAAGCAATACTCAAAAAACCTACATAGTACATTGCCATGATTGTGCACGAAAAACAAGCAAAAGTTTGGAA 3702
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3703 AATTTTGTGGTGCTCGAACAGTACAAAATGGAGGACCTAATCCAAGTTTATGATCAATTTACACTAGCTCTTTC 3776
Query 472 ---------------- 471
Sbjct 3777 ATTATCATCCTCATCT 3792
