Nucleotide Global Alignment

Description

Query:
TRCN0000479140
Subject:
XM_011531451.3
Aligned Length:
4538
Identities:
397
Gaps:
4102

Alignment

Query    1  ATGAAATCGTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG  74
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAATCCTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG  74

Query   75  AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG  148

Query  149  ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG-----  217
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct  149  ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTT  222

Query  218  ----------------------TAAAAGC--AACCAGACGCAAAG------------TCTTT---------GGT  246
                                  |||||||  |     |.|.||||            |||||         |||
Sbjct  223  CGCTGCTACGAATCTTTAATCTTAAAAGCTGA-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT  291

Query  247  CCGCACTT------------------------------------TGC------------------TCTACCAAG  266
               |||||                                    |||                  |.|||  ||
Sbjct  292  ---CACTTCAACCTCTTGTTGGAAGATTATTCAAAAGCATTATCTGCATATCAGAGATATTACAGTTTAC--AG  360

Query  267  GC----------------CCCGCGTTCCT-TACCGCC----------------------CA-------------  288
            ||                .|.|||||..| ||..|||                      ||             
Sbjct  361  GCTGACTACTGGAAGAATGCTGCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTG  434

Query  289  -GCCAGTA------------------TTTATTTTG------GCTCTGCTCCATGGCCAAGG-------------  324
             ||.|.||                  |||||.|||      |||.|..||.|  |||||||             
Sbjct  435  GGCAATTAAAGCATTTCAAGATGTCCTTTATGTTGACCCCAGCTTTTGTCGA--GCCAAGGAAATTCATTTACG  506

Query  325  ----GGTCGGA-----AAAGTG------------------------------TTTC---TTGCCT---TTG-CT  352
                ||.|..|     ||||||                              ||||   |.||||   ||| ||
Sbjct  507  ACTTGGGCTCATGTTCAAAGTGAACACAGACTACAAGTCTAGTTTAAAGCATTTTCAGTTAGCCTTGATTGACT  580

Query  353  G---TCCCCGTACT----------CTGGAAT---ACTTC-----GCCCCTTGCT-------CCAGA------CT  392
            |   |||..|||||          |||.|||   |.|||     ||||.||..|       |||||      .|
Sbjct  581  GTAATCCATGTACTTTGTCCAATGCTGAAATTCAATTTCATATTGCCCATTTGTATGAAACCCAGAGGAAGTAT  654

Query  393  CCCTTCTACTCTG---AGGA--------AAAAAAAAATCGGACGCTTTGG--GACCGGGCTAAACCGGGT--CT  451
            |      |.||||   ||||        ||.||           ||||.|  |||.|   .|||||   |  ||
Sbjct  655  C------ATTCTGCAAAGGAGGCATATGAACAA-----------CTTTTGCAGACAG---AAAACC---TTCCT  705

Query  452  ACACCA-------CA-------TGC--CTGTTACTT--------------------------------------  471
            .|||.|       ||       |||  |.||||..|                                      
Sbjct  706  GCACAAGTAAAAGCAACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAGGAGACAAAGC  779

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  780  CACAAAGGAAAGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGCCAATCGTGGT  853

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  854  ATTTTCTTGGAAGGTGTTATTCAAGTATTGGGAAAGTTCAGGATGCCTTTATATCTTACAGGCAATCTATTGAT  927

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  928  AAATCAGAAGCAAGTGCAGATACATGGTGTTCAATAGGTGTGTTGTATCAGCAGCAAAATCAGCCTATGGATGC  1001

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1002  TTTACAGGCATATATTTGTGCTGTACAATTGGACCATGGGCATGCCGCAGCCTGGATGGACCTAGGTACTCTCT  1075

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1076  ATGAATCCTGCAATCAACCTCAAGATGCCATTAAATGCTACCTAAATGCAGCTAGAAGCAAACGTTGTAGTAAT  1149

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1150  ACCTCTACGCTTGCTGCAAGAATTAAATTTCTACAGAATGGTTCTGATAACTGGAATGGTGGCCAGAGTCTTTC  1223

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1224  ACATCATCCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAAATTACAGCACTTGGAACAACTGCGAG  1297

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1298  CAAATAGAGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGTTAGAAAGTCAGTTTGTCTTAATGCAG  1371

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1372  CAAATGAGACACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCATAACGGGGCCATAACTGATTCATCACT  1445

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1446  GCCTACAAACTCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAGAGTATCTAGCGTCTCTCAGCCTGGAG  1519

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1520  TTCGCCCTGCTTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTGCAGGCTGTATTCCTTGTGGCACATCA  1593

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1594  AAAATTCTAGGAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATAGCAGGAAGTGAAAGTAATGGAAATGT  1667

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1668  GCCTTACCTGCAGCAAAATACACACACTCTACCTCATAATCATACAGACCTGAACAGCAGCACAGAAGAGCCAT  1741

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1742  GGAGAAAACAGCTATCTAACTCCGCTCAGGCCTACCTTGGACATCTTACAGGTTTCATACAAGACAACTGCAAT  1815

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1816  AAAGGGCTTCATAAAAGTCAGAGTTCATGTTTGTCAGGACCTAATGAAGAACAACCTCTGTTTTCCACTGGGTC  1889

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1890  AGCCCAGTATCACCAGGCAACTAGCACTGGTATTAAGAAGGCGAATGAACATCTCACTCTGCCTAGTAATTCAG  1963

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1964  TACCACAGGGGGATGCTGACAGTCACCTCTCCTGTCATACTGCTACCTCAGGTGGACAACAAGGCATTATGTTT  2037

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2038  ACCAAAGAGAGCAAGCCTTCAAAAAATAGATCCTTGGTGCCTGAAACAAGCAGGCATACTGGAGACACATCTAA  2111

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2112  TGGCTGTGCTGATGTCAAGGGACTTTCTAATCATGTTCATCAGTTGATAGCAGATGCTGTTTCCAGTCCTAACC  2185

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2186  ATGGAGATTCACCAAATTTATTAATTGCAGACAATCCTCAGCTCTCTGCTTTGTTGATTGGAAAAGCCAATGGC  2259

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2260  AATGTGGGTACTGGAACCTGTGACAAAGTGAATAATATTCACCCAGCTGTTCATACAAAGACTGATCATTCTGT  2333

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2334  TGCCTCTTCACCCTCTTCAGCCATTTCCACAGCAACACCTTCTCCTAAATCCACTGAGCAGAGAAGCATAAACA  2407

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2408  GTGTTACCAGCCTTAACAGTCCTCACAGTGGATTACACACAGTCAATGGAGAGGGGCTGGGGAAGTCACAGAGC  2481

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2482  TCTACAAAAGTAGACCTGCCTTTAGCTAGCCACAGATCTACTTCTCAGATCTTACCATCAATGTCAGTGTCTAT  2555

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2556  ATGCCCCAGTTCAACAGAAGTTCTGAAAGCATGCAGGAATCCAGGTAAAAATGGCTTGTCTAATAGCTGCATTT  2629

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2630  TGTTAGATAAATGTCCACCTCCAAGACCACCAACTTCACCATACCCACCCTTGCCAAAGGACAAGTTGAATCCA  2703

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2704  CCCACACCTAGTATTTACTTGGAAAATAAACGTGATGCTTTCTTTCCTCCATTACATCAATTTTGTACAAATCC  2777

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2778  AAAAAACCCTGTTACAGTAATACGTGGCCTTGCTGGAGCTCTTAAATTAGATCTTGGACTTTTCTCTACCAAAA  2851

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2852  CTTTGGTAGAAGCTAACAATGAACATATGGTAGAAGTGAGGACACAGTTGCTGCAACCAGCAGATGAAAACTGG  2925

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2926  GATCCCACTGGAACAAAGAAAATCTGGCGTTGTGAAAGCAATAGATCTCATACTACAATTGCCAAATACGCACA  2999

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3000  ATACCAGGCTTCCTCCTTCCAGGAATCATTGAGAGAAGAAAATGAGAAAAGAACACAACACAAAGATCATTCAG  3073

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3074  ATAACGAATCCACATCTTCAGAGAATTCTGGAAGGAGAAGGAAAGGACCTTTTAAAACCATAAAATTTGGGACC  3147

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3148  AACATTGACCTCTCTGATAACAAAAAGTGGAAGTTGCAGTTACATGAACTGACTAAACTTCCTGCTTTTGCGCG  3221

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3222  TGTGGTGTCAGCAGGAAATCTTCTAACCCATGTTGGGCATACCATTCTGGGCATGAATACAGTACAACTGTATA  3295

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3296  TGAAAGTTCCAGGGAGTCGGACACCAGGTCACCAAGAAAATAACAACTTCTGCTCTGTTAACATAAATATTGGT  3369

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3370  CCAGGAGATTGTGAATGGTTTGTTGTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAAAAATAA  3443

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3444  TTTGAATTTTTTAATGAGTTCTTGGTGGCCCAACCTTGAAGATCTTTATGAAGCAAATGTCCCTGTGTATAGAT  3517

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3518  TTATTCAGCGACCTGGAGATTTGGTCTGGATAAATGCAGGCACTGTGCATTGGGTTCAAGCTGTTGGCTGGTGC  3591

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3592  AATAACATTGCCTGGAATGTTGGTCCACTTACAGCCTGCCAGTATAAATTGGCAGTGGAACGGTATGAATGGAA  3665

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3666  CAAATTGAAAAGTGTGAAGTCACCAGTACCCATGGTGCATCTTTCCTGGAATATGGCACGAAATATCAAAGTCT  3739

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3740  CAGATCCAAAGCTTTTTGAAATGATTAAGTATTGTCTTTTGAAAATTCTGAAGCAATATCAGACATTGAGAGAA  3813

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3814  GCTCTTGTTGCAGCAGGAAAAGAGGTTATATGGCATGGGCGGACAAATGATGAACCAGCTCATTACTGTAGCAT  3887

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3888  TTGTGAGGTGGAGGTTTTTAATCTGCTTTTTGTCACTAATGAAAGCAATACTCAAAAAACCTACATAGTACATT  3961

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3962  GCCATGATTGTGCACGAAAAACAAGCAAAAGTTTGGAAAATTTTGTGGTGCTCGAACAGTACAAAATGGAGGAC  4035

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 4036  CTAATCCAAGTTTATGATCAATTTACACTAGCCTCCCCATGGCCACCCATGGACCAGTCGGCATTCACTTCCTC  4109

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 4110  CCTTCTGCGGCCCATAAAAGCCCTGGGTTCAGGCAGAGCTGAGCAGACATCAGGTGACCAGCTGCAGAAAGGAG  4183

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 4184  CTACCCACTCCAGGGCCTCATCTCTGCTGAGAGCTGCAGAGATGACCAGAAGACCTGCATCCAGAGAGGAGCTT  4257

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 4258  CCTGATCCAGGGCTATTCTGTCACTCAATAAAGCTTCTCTTTGTCTTGTTCTCCTTCCATTTGTCCACGTTCCT  4331

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 4332  CATTCTTCCCTGCCAAAGGAGAAGAACTTGGGAGCTGCTGGATGGTGGGGCTGAAAGCTGTAAAACAAACAGGG  4405

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 4406  CTAACACGCCCATTGCTCACTACCTTGTGAGTGAAGAGGAGAGAAGAGCTGTAGCCCTTCAGAGAGTCCAGACC  4479

Query  472  ------------------------  471
                                    
Sbjct 4480  TGGGAGCTCCTTGAGCCAGGGTTG  4503

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