Nucleotide Global Alignment
Description
- Query:
- TRCN0000479140
- Subject:
- XR_002958831.1
- Aligned Length:
- 3162
- Identities:
- 397
- Gaps:
- 2726
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCTACAACTAAGTGGTTGGGAGCGGGGAGGTCGCGGCGGCTGCGTGGGGTTCGCCCGTGACACAATTACAACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGTGCTGGTGCTGGCAAAGTTTGTGATTTTAAGAAATTCTGCTGTGCTCTCCAGCACTGCGAGCTTCTGCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGTAGTTTCCCAGATGTGATCCAGGTAGCCGAGTTCCGCTGCCCGTGCTTCGGTAGCTTAAGTCTTTGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCTTTTTTCCTTGCAGCCGCTGAGGAGGCGATAAAATTGGCGTCACAGTCTCAAGCAGCGATTGAAGGCGTC 296
Query 1 -----------------------------------------------------------ATGAAATCGTGCGCA 15
||||||||.||||||
Sbjct 297 TTTTCAACTACTCGATTAAGGTTGGGTATCGTCGTGGGACTTGGAAATTTGTTGTTTCCATGAAATCCTGCGCA 370
Query 16 GTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGGAAAAGCGAGCCGCGA 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGGAAAAGCGAGCCGCGA 444
Query 90 GAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGGACAGCCGTCTCTTCG 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGGACAGCCGTCTCTTCG 518
Query 164 GGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG-------------------- 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTTCGCTGCTACGAATCT 592
Query 218 -------TAAAAGC--AACCAGACGCAAAG------------TCTTT---------GGTCCGCACTT------- 254
||||||| | |.|.|||| ||||| ||| |||||
Sbjct 593 TTAATCTTAAAAGCTGA-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT---CACTTCAACCTC 658
Query 255 -----------------------------TGC------------------TCTACCAAGGC------------- 268
||| |.||| ||||
Sbjct 659 TTGTTGGAAGATTATTCAAAAGCATTATCTGCATATCAGAGATATTACAGTTTAC--AGGCTGACTACTGGAAG 730
Query 269 ---CCCGCGTTCCT-TACCGCC----------------------CA--------------GCCAGTA------- 295
.|.|||||..| ||..||| || ||.|.||
Sbjct 731 AATGCTGCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTGGGCAATTAAAGCATT 804
Query 296 -----------TTTATTTTG------GCTCTGCTCCATGGCCAAGG-----------------GGTCGGA---- 331
|||||.||| |||.|..||.| ||||||| ||.|..|
Sbjct 805 TCAAGATGTCCTTTATGTTGACCCCAGCTTTTGTCGA--GCCAAGGAAATTCATTTACGACTTGGGCTCATGTT 876
Query 332 -AAAGTG------------------------------TTTC---TTGCCT---TTG-CTG---TCCCCGTACT- 363
|||||| |||| |.|||| ||| ||| |||..|||||
Sbjct 877 CAAAGTGAACACAGACTACAAGTCTAGTTTAAAGCATTTTCAGTTAGCCTTGATTGACTGTAATCCATGTACTT 950
Query 364 ---------CTGGAAT---ACTTC-----GCCCCTTGCT-------CCAGA------CTCCCTTCTACTCTG-- 405
|||.||| |.||| ||||.||..| ||||| .|| |.||||
Sbjct 951 TGTCCAATGCTGAAATTCAATTTCATATTGCCCATTTGTATGAAACCCAGAGGAAGTATC------ATTCTGCA 1018
Query 406 -AGGA--------AAAAAAAAATCGGACGCTTTGG--GACCGGGCTAAACCGGGT--CTACACCA-------CA 459
|||| ||.|| ||||.| |||.| .||||| | ||.|||.| ||
Sbjct 1019 AAGGAGGCATATGAACAA-----------CTTTTGCAGACAG---AAAACC---TTCCTGCACAAGTAAAAGCA 1075
Query 460 -------TGC--CTGTTACTT----------------------------------------------------- 471
||| |.||||..|
Sbjct 1076 ACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAGGAGACAAAGCCACAAAGGAAAGCTA 1149
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1150 TGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGCCAATCGTGGTATTTTCTTGGAAGGT 1223
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1224 GTTATTCAAGTATTGGGAAAGTTCAGGATGCCTTTATATCTTACAGGCAATCTATTGATAAATCAGAAGCAAGT 1297
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1298 GCAGATACATGGTGTTCAATAGGTGTGTTGTATCAGCAGCAAAATCAGCCTATGGATGCTTTACAGGCATATAT 1371
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1372 TTGTGCTGTACAATTGGACCATGGGCATGCCGCAGCCTGGATGGACCTAGGTACTCTCTATGAATCCTGCAATC 1445
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1446 AACCTCAAGATGCCATTAAATGCTACCTAAATGCAGCTAGAAGCAAACGTTGTAGTAATACCTCTACGCTTGCT 1519
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1520 GCAAGAATTAAATTTCTACAGGCTTATAGAGCTCATGATCCAAATACTGAACATGTATTAAACCACAGTCAAAC 1593
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1594 ACCAATTTTACAGCAATCCTTGTCACTACACATGATTACTTCTAGCCAAGTAGAAGGCCTGTCCAGTCCTGCCA 1667
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1668 AGAAGAAAAGAACATCTAGTCCAACAAAGAATGGTTCTGATAACTGGAATGGTGGCCAGAGTCTTTCACATCAT 1741
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1742 CCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAAATTACAGCACTTGGAACAACTGCGAGCAAATAG 1815
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1816 AGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGTTAGAAAGTCAGTTTGTCTTAATGCAGCAAATGA 1889
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1890 GACACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCATAACGGGGCCATAACTGATTCATCACTGCCTACA 1963
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1964 AACTCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAGAGTATCTAGCGTCTCTCAGCCTGGAGTTCGCCC 2037
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2038 TGCTTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTGCAGGCTGTATTCCTTGTGGCACATCAAAAATTC 2111
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2112 TAGGAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATAGCAGGAAGTGAAAGTAATGGAAATGTGCCTTAC 2185
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2186 CTGCAGCAAAATACACACACTCTACCTCATAATCATACAGACCTGAACAGCAGCACAGAAGAGCCATGGAGAAA 2259
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2260 ACAGCTATCTAACTCCGCTCAGGAATCCAGGTAAAAATGGCTTGTCTAATAGCTGCATTTTGTTAGATAAATGT 2333
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2334 CCACCTCCAAGACCACCAACTTCACCATACCCACCCTTGCCAAAGGACAAGTTGAATCCACCCACACCTAGTAT 2407
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2408 TTACTTGGAAAATAAACGTGATGCTTTCTTTCCTCCATTACATCAATTTTGTACAAATCCAAAAAACCCTGTTA 2481
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2482 CAGTAATACGTGGCCTTGCTGGAGCTCTTAAATTAGATCTTGGACTTTTCTCTACCAAAACTTTGGTAGAAGCT 2555
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2556 AACAATGAACATATGGTAGAAGTGAGGACACAGTTGCTGCAACCAGCAGATGAAAACTGGGATCCCACTGGAAC 2629
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2630 AAAGAAAATCTGGCGTTGTGAAAGCAATAGATCTCATACTACAATTGCCAAATACGCACAATACCAGGCTTCCT 2703
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2704 CCTTCCAGGAATCATTGAGAGAAGAAAATGAGAAAAGAACACAACACAAAGATCATTCAGATAACGAATCCACA 2777
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2778 TCTTCAGAGAATTCTGGAAGGAGAAGGAAAGGACCTTTTAAAACCATAAAATTTGGGACCAACATTGACCTCTC 2851
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2852 TGATAACAAAAAGTGGAAGTTGCAGTTACATGAACTGACTAAACTTCCTGCTTTTGCGCGTGTGGTGTCAGCAG 2925
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2926 GAAATCTTCTAACCCATGTTGGGCATACCATTCTGGGCATGAATACAGTACAACTGTATATGAAAGTTCCAGGG 2999
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3000 AGTCGGACACCAGGTCACCAAGAAAATAACAACTTCTGCTCTGTTAACATAAATATTGGTCCAGGAGATTGTGA 3073
Query 472 ------------------------------------------------------ 471
Sbjct 3074 ATGGTTTGTTGTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAA 3127
