Nucleotide Global Alignment
Description
- Query:
- TRCN0000479222
- Subject:
- XR_001746226.1
- Aligned Length:
- 3692
- Identities:
- 946
- Gaps:
- 2733
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGAAGGCGGCGCAGCGCGGCGCGGGAGGCGTGCTGGGCGCGGGGCTGCGGTGCCCAGAGGCTGCGGCATTAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTCGGCGCCCCCGACCTTCCGCGTCCCGGGGTGGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGGCATATGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGAGCTGGCTGCTCCAGAATGAACCACAGCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGC 222
Query 1 -----------------------------------------------------ATGGTT--ATCACTCAGCCAG 19
.|||.| |...|.|.|||
Sbjct 223 CTGTGAACCACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCC-- 294
Query 20 ATGAAG------CTTCTGGTCT-GCTTCCAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAA 86
||.|| ||.|||| || |...|.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 -TGGAGGGAGCCCTCCTGG-CTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAA 366
Query 87 TACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGG 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 TACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGG 440
Query 161 CTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCG 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 CTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCG 514
Query 235 AGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATATCTACTCTACCAGTCAGAT 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 AGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATATCTACTCTACCAGTCAGAT 588
Query 309 GTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTGAGCCTGACCTTGACTCTTG 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 589 GTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTGAGCCTGACCTTGACTCTTG 662
Query 383 TGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCC 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 TGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCC 736
Query 457 CTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGAGTGTGATTCAGCTTTGGTT 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 CTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGAGTGTGATTCAGCTTTGGTT 810
Query 531 TGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGT 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 TGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGT 884
Query 605 CCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGG 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 CCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGG 958
Query 679 CCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGA 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 CCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGA 1032
Query 753 GCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACT 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 GCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACT 1106
Query 827 ACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 ACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCA 1180
Query 901 TGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGG----------- 963
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 TGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGGTGACCTAGGGA 1254
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1255 TGAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCAAGATGGCCAATGGGGAGCC 1328
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1329 CCAGATGTAGAACAATGGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG 1402
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1403 AATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATTGTTTCATAGAC 1476
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1477 CCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTGCGATTTTGGCTTCATCTCC 1550
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1551 CACAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGACTGACATACCTATTCCTTTCCATTTGTTGGACTCCTA 1624
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1625 TTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTCCCACACAGCCAACCCTGCTGCTCTC 1698
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1699 TGCCTCCTTTAAATTCTTGATACAGCTGCTGCTTGTTCTGATGTTTTATGGTATTGATTCTGTTTTCCTGTGTA 1772
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1773 TATGCCAGTTTTTCTAGCTAGACTGTAAACTCCTTAAGGACAGAGACTACACCTTGTACTTTTTGTGCATGACC 1846
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1847 TGGACCTGCTAAGGAAAAAAAAATCTTGTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCT 1920
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1921 TTCCAAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTA 1994
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1995 ATTTTTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATGGGTGGATTGGATGATTTTT 2068
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2069 TTTTTTTTAATTGAGATGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCA 2142
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2143 ACCCCCGCCACCTAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGCACCAC 2216
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2217 TACTCCTGGATATTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAAGCTGGTCTTGAACTCC 2290
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2291 TGACCTCAGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGACGTGAGGCACCACAACCAGCCT 2364
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2365 GGATGATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATTCTGCCCCCTCATAGCCCTT 2438
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2439 GGCCTATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAGATGACCTGGTCCTAGGACA 2512
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2513 CCCTTGGACAGAAGACTGGCCTACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGA 2586
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2587 CCTTGGCTAAGTCACTTAACCTTTCTGATTGTCATTTCGCTTTTTAATAAAGTGGGTCTGGTGAACAAGAAATG 2660
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2661 TAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGAGAAGAGAGATCA 2734
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2735 TGGGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCAC 2808
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2809 GAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCC 2882
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2883 GTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATGTGTTTGTTAAATGACAAAG 2956
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2957 CAGCAGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTTTCTTTTCCTGACTTTTCCTTTCTTT 3030
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3031 AGAATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATGTACATTTCTCGGCATCTGT 3104
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3105 GCCTCAGTTTCCTCATTTATAAAATCCCTATGATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGC 3178
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3179 ATACTACACACAGGAATGCTCATCAGTTTTTAAATTTTATTTAATTTTTATTTATTTTTTTTTAAATGTAATTT 3252
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3253 TTTCAGAGAGATAAGGTCTTGCTATGTTACCCAGCCTAGTCTTGAACTCCTGGCCTCAAGTGATCCTCCTGCCT 3326
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3327 TGGCCTCCCATGCTGCTGGGATTACAGGTGTGAACTACCATGCCCAGCCAGCTCCTAAGTCTTAAGGCTCTGTG 3400
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3401 TTAGTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAGGTGGTAACTCATTGCAT 3474
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3475 GGATTCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCCACTTAAAAACAATGTTCTTCCTCTCATTGAGTCTC 3548
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3549 ATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTTGTTGTAAGGATTAAATGGTGTAAAAAAA 3622
Query 964 ------------------------------------------------------------------ 963
Sbjct 3623 TGTCAAGTGCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCTCAATAAATTGTTACTTAAAAAA 3688
