Nucleotide Global Alignment

Description

Query:
TRCN0000479222
Subject:
XR_001746226.1
Aligned Length:
3692
Identities:
946
Gaps:
2733

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAAGGCGGCGCAGCGCGGCGCGGGAGGCGTGCTGGGCGCGGGGCTGCGGTGCCCAGAGGCTGCGGCATTAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCTCGGCGCCCCCGACCTTCCGCGTCCCGGGGTGGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGGCATATGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGAGCTGGCTGCTCCAGAATGAACCACAGCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGC  222

Query    1  -----------------------------------------------------ATGGTT--ATCACTCAGCCAG  19
                                                                 .|||.|  |...|.|.|||  
Sbjct  223  CTGTGAACCACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCC--  294

Query   20  ATGAAG------CTTCTGGTCT-GCTTCCAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAA  86
             ||.||      ||.|||| || |...|.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  295  -TGGAGGGAGCCCTCCTGG-CTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAA  366

Query   87  TACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGG  160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  367  TACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGG  440

Query  161  CTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCG  234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  441  CTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCG  514

Query  235  AGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATATCTACTCTACCAGTCAGAT  308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  515  AGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATATCTACTCTACCAGTCAGAT  588

Query  309  GTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTGAGCCTGACCTTGACTCTTG  382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  589  GTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTGAGCCTGACCTTGACTCTTG  662

Query  383  TGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCC  456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  663  TGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCC  736

Query  457  CTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGAGTGTGATTCAGCTTTGGTT  530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  CTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGAGTGTGATTCAGCTTTGGTT  810

Query  531  TGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGT  604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  TGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGT  884

Query  605  CCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGG  678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  CCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGG  958

Query  679  CCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGA  752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  CCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGA  1032

Query  753  GCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACT  826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  GCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACT  1106

Query  827  ACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCA  900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107  ACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCA  1180

Query  901  TGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGG-----------  963
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct 1181  TGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGGTGACCTAGGGA  1254

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1255  TGAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCAAGATGGCCAATGGGGAGCC  1328

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1329  CCAGATGTAGAACAATGGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGG  1402

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1403  AATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATTGTTTCATAGAC  1476

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1477  CCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTGCGATTTTGGCTTCATCTCC  1550

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1551  CACAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGACTGACATACCTATTCCTTTCCATTTGTTGGACTCCTA  1624

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1625  TTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTCCCACACAGCCAACCCTGCTGCTCTC  1698

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1699  TGCCTCCTTTAAATTCTTGATACAGCTGCTGCTTGTTCTGATGTTTTATGGTATTGATTCTGTTTTCCTGTGTA  1772

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1773  TATGCCAGTTTTTCTAGCTAGACTGTAAACTCCTTAAGGACAGAGACTACACCTTGTACTTTTTGTGCATGACC  1846

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1847  TGGACCTGCTAAGGAAAAAAAAATCTTGTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCT  1920

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1921  TTCCAAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTA  1994

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1995  ATTTTTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATGGGTGGATTGGATGATTTTT  2068

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2069  TTTTTTTTAATTGAGATGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCA  2142

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2143  ACCCCCGCCACCTAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGCACCAC  2216

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2217  TACTCCTGGATATTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAAGCTGGTCTTGAACTCC  2290

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2291  TGACCTCAGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGACGTGAGGCACCACAACCAGCCT  2364

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2365  GGATGATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATTCTGCCCCCTCATAGCCCTT  2438

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2439  GGCCTATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAGATGACCTGGTCCTAGGACA  2512

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2513  CCCTTGGACAGAAGACTGGCCTACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGA  2586

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2587  CCTTGGCTAAGTCACTTAACCTTTCTGATTGTCATTTCGCTTTTTAATAAAGTGGGTCTGGTGAACAAGAAATG  2660

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2661  TAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGAGAAGAGAGATCA  2734

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2735  TGGGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCAC  2808

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2809  GAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCC  2882

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2883  GTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATGTGTTTGTTAAATGACAAAG  2956

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2957  CAGCAGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTTTCTTTTCCTGACTTTTCCTTTCTTT  3030

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3031  AGAATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATGTACATTTCTCGGCATCTGT  3104

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3105  GCCTCAGTTTCCTCATTTATAAAATCCCTATGATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGC  3178

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3179  ATACTACACACAGGAATGCTCATCAGTTTTTAAATTTTATTTAATTTTTATTTATTTTTTTTTAAATGTAATTT  3252

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3253  TTTCAGAGAGATAAGGTCTTGCTATGTTACCCAGCCTAGTCTTGAACTCCTGGCCTCAAGTGATCCTCCTGCCT  3326

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3327  TGGCCTCCCATGCTGCTGGGATTACAGGTGTGAACTACCATGCCCAGCCAGCTCCTAAGTCTTAAGGCTCTGTG  3400

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3401  TTAGTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAGGTGGTAACTCATTGCAT  3474

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3475  GGATTCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCCACTTAAAAACAATGTTCTTCCTCTCATTGAGTCTC  3548

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3549  ATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTTGTTGTAAGGATTAAATGGTGTAAAAAAA  3622

Query  964  ------------------------------------------------------------------  963
                                                                              
Sbjct 3623  TGTCAAGTGCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCTCAATAAATTGTTACTTAAAAAA  3688