Nucleotide Global Alignment
Description
- Query:
- TRCN0000479398
- Subject:
- XR_429119.4
- Aligned Length:
- 4220
- Identities:
- 2448
- Gaps:
- 1771
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGCCGTCCGTTGTGCGCCTAGGGGCCAGTTTTCTTTCCAGCCTCCCCGGCCGGAGTGGGTTCCAGCTTTTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTGGGGAGGGCATTTATCCCACCTCCGCTATTTCAGCTGCCAGAGGGGAGGCAAGGTGTGGGGAAGTTTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCCGGGCGAAGAAGCTCTGCGGAACTGTCATTTTCCGGAACTGGATGCTTGCTTCCTGGCGGGGTTCTGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGAACACCGCGGGGCAAGATGGCGGTAGTGCGTCGGCTGCTGCCCCGGGTCTGGCAGAACTCGGGTGTTTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGAGACAGTGGCAGCTGCGGCCCCGACCCCAAGTGCGGGGACCTCCGGCGAATAAAGGTCGGCCTGCGGGTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCGGTAGGGCCTGCGGTCCGGCCTGCGGGAGAACTGGGTCGTCAGTCCTCCGAGTGGTGGGGCTGGGGACTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAGGGAGTTGGCTCTAGGGCACAGTCCCTGCCTGGCCAGGTCGGAGGAACAAGTGCTGGGATCTGGCGTGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTCCAGGGGCTCTTTCCGCGGCCCTTTCCACCTCTTTTCACTTTGGGGACGGTAGGCCTTTATAAACGGACTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGCTGGGTGATTTGTTCCTGTGGTTGTTGATGCCGAGGAAAGACTCTGGGCCCCAGGACTCACCTAAACTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTCGAATACTGTTCGCTCGCTGTGTGACCTTGGAAAAAATAACAAGCTTTTCTGAAGTGAGAAGCTGTTCTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCACGAGTCCTGTGCAAGATCACTAATGATTACCTGGCATTTCTGCGACACAGGCAGGTCCTCAGGGTTTGTG 814
Query 1 -------------ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAG 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAAGTTTGCAAACATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAG 888
Query 62 AAGAAAGGCTTGTGCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGT 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGAAAGGCTTGTGCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGT 962
Query 136 CGGAGTCGACTGCAGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAA 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGGAGTCGACTGCAGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAA 1036
Query 210 AAGAAGTGCACTTTGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGA 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGAAGTGCACTTTGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGA 1110
Query 284 GATTTGAGAAGTTGTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATTTGAGAAGTTGTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCC 1184
Query 358 CTGGCTTGTTCTAAGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTT 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGGCTTGTTCTAAGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTT 1258
Query 432 TCTCAAGCAGCTCAAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCT 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTCAAGCAGCTCAAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCT 1332
Query 506 TCACAGACACTTCAACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGT 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCACAGACACTTCAACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGT 1406
Query 580 GCAAATATAATGGGACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGC 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCAAATATAATGGGACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGC 1480
Query 654 AAGACCCCGTCCTTGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGCTG 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGACCCCGTCCTTGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGCTG 1554
Query 728 CACAGTTCTCAGACAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTGTGCCTGCTCTGGTGACTCATCTC 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CACAGTTCTCAGACAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTGTGCCTGCTCTGGTGACTCATCTC 1628
Query 802 AGCACAGTGACCCCTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATATTTTTAAG 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGCACAGTGACCCCTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATATTTTTAAG 1702
Query 876 AGACCAAGATCGATGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGGCAACCTCC 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGACCAAGATCGATGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGGCAACCTCC 1776
Query 950 TACACTTGGGCTCCCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCACCCAGACG 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TACACTTGGGCTCCCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCACCCAGACG 1850
Query 1024 CTGTGCTACTGTCAGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTGGTT 1097
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTGTGCTACTGTCGGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTGGTT 1924
Query 1098 CTCCCAATCTGTGGATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTTGTGGGGGG 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTCCCAATCTGTGGATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTTGTGGGGGG 1998
Query 1172 TGCCTCTGATCCGGATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAGAGCCAGGAGCCAGCCCACGCA 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGCCTCTGATCCGGATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAGAGCCAGGAGCCAGCCCACGCA 2072
Query 1246 CAGCCAGCATCCCCTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCGGCATCAGT 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGCCAGCATCCCCTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCGGCATCAGT 2146
Query 1320 CCGGAATATTCTCAGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAACATCTGTG 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCGGAATATTCTCAGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAACATCTGTG 2220
Query 1394 TCCTCTACCAGACCTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTTACCTTGAT 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TCCTCTACCAGACCTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTTACCTTGAT 2294
Query 1468 GACCTGCTTCCCAAACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTCTTGGAATG 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GACCTGCTTCCCAAACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTCTTGGAATG 2368
Query 1542 CCTGAACAATGACACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTCGCGGCACC 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCTGAACAATGACACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTCGCGGCACC 2442
Query 1616 TCATCAC------------------------------------------------------------------- 1622
|||||||
Sbjct 2443 TCATCACGTTGGTGAAGAATTATAAGATACAATGGACCTCAGGCAGTTATGTTCAGGCTGGAAGACTTTAGCCG 2516
Query 1623 -------------------------------------------------------------------------- 1622
Sbjct 2517 GAGAGGATCAGGGACATGTAGGTGGCAGATTGGGTGAGGATCATGGAAGAACTCACTGAGCAGTTGGAGGCAAG 2590
Query 1623 ------------------------------------------------AATCCTTGATGACATTGAAGTTTATG 1648
||||||||||||||||||||||||||
Sbjct 2591 AGCAGGGGTCTAGCTGCTGGTGAAGACATCCTTAATCACTGGATGGGGAATCCTTGATGACATTGAAGTTTATG 2664
Query 1649 AAGAACAGATTTCATTCAAACTGGAAGAGCTGGTCACTATCTCCTCTTTCCTGAATTCTTTTGTGTTTAAGATG 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AAGAACAGATTTCATTCAAACTGGAAGAGCTGGTCACTATCTCCTCTTTCCTGAATTCTTTTGTGTTTAAGATG 2738
Query 1723 ATCTGGGATGGAATTGTAGAGAACGCCAAGGGTGAGACCTTGGAGCTGTTCCAGTCTGTCCACGGGTGGCTTAT 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 ATCTGGGATGGAATTGTAGAGAACGCCAAGGGTGAGACCTTGGAGCTGTTCCAGTCTGTCCACGGGTGGCTTAT 2812
Query 1797 GGTGCTGTACGAGCGGGACTGCCGGCGGCGCTTCACCCCCGAGGACCACTGGCTGCGAAAGGATCTCAAACCTA 1870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GGTGCTGTACGAGCGGGACTGCCGGCGGCGCTTCACCCCCGAGGACCACTGGCTGCGAAAGGATCTCAAACCTA 2886
Query 1871 GCGTGCTCTTCCAAGAACTCGACAGGGACAGAAAACGGGCACAGTTGATCCTGCAGTACATCCCACATGTCATC 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GCGTGCTCTTCCAAGAACTCGACAGGGACAGAAAACGGGCACAGTTGATCCTGCAGTACATCCCACATGTCATC 2960
Query 1945 CCTCACAAAAACAGAGTTCTACTGTTTCGAACCATGGTTACCAAGGAGAAGGAGAAACTGGGGCTGGTGGAAAC 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CCTCACAAAAACAGAGTTCTACTGTTTCGAACCATGGTTACCAAGGAGAAGGAGAAACTGGGGCTGGTGGAAAC 3034
Query 2019 CAGCTCTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCCAGGATGCTGGAGGACGGCTACGAGCAGC 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CAGCTCTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCCAGGATGCTGGAGGACGGCTACGAGCAGC 3108
Query 2093 TTAGGCAGCTCTCCCAGCACGCCATGAAGGGGGTCATCCGTGTGAAGTTTGTCAATGACCTCGGGGTGGACGAA 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TTAGGCAGCTCTCCCAGCACGCCATGAAGGGGGTCATCCGTGTGAAGTTTGTCAATGACCTCGGGGTGGACGAA 3182
Query 2167 GCAGGGATTGATCAAGACGGTGTTTTTAAGGAGTTCTTGGAAGAGATCATCAAGAGAGTTTTTGACCCAGCACT 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GCAGGGATTGATCAAGACGGTGTTTTTAAGGAGTTCTTGGAAGAGATCATCAAGAGAGTTTTTGACCCAGCACT 3256
Query 2241 CAATCTGTTCAAGACAACCAGTGGGGATGAGAGGCTGTACCCCTCACCCACATCCTACATCCATGAGAATTACC 2314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CAATCTGTTCAAGACAACCAGTGGGGATGAGAGGCTGTACCCCTCACCCACATCCTACATCCATGAGAATTACC 3330
Query 2315 TGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGGAAGGCTGTGTATGAGGGAATTGTGGTGGACGTGCCATTT 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGGAAGGCTGTGTATGAGGGAATTGTGGTGGACGTGCCATTT 3404
Query 2389 GCATCCTTCTTCCTGAGCCAACTGCTTGGGCACCACCACAGCGTCTTCTATAGCTCGGTGGATGAACTGCCTTC 2462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GCATCCTTCTTCCTGAGCCAACTGCTTGGGCACCACCACAGCGTCTTCTATAGCTCGGTGG------------- 3465
Query 2463 TCTGGACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGCGCTATGATGGGGACATCACTGACCTGGGCCTGA 2536
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2537 CGCTGTCTTACGACGAGGACGTCATGGGTCAGCTTGTTTGCCATGAACTGATTCCTGGAGGGAAGACCATTCCT 2610
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2611 GTTACAAATGAAAATAAAATTAGCTACATCCATCTGATGGCACATTTTCGAATGCACACTCAAATAAAAAACCA 2684
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2685 AACAGCTGCCCTCATTAGCGGATTCCGTTCCATTATCAAACCCGAGTGGATCCGAATGTTCTCAACTCCTGAAC 2758
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2759 TGCAGCGTCTCATCTCTGGCGACAATGCTGAGATTGATCTGGAAGATTTAAAGAAGCACACAGTCTACTACGGT 2832
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2833 GGTTTCCATGGAAGTCACAGAGTCATCATCTGGCTCTGGGATATTCTGGCCTCCGACTTCACACCGGATGAGAG 2906
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2907 AGCTATGTTTCTGAAGTTCGTGACCAGCTGCTCCAGACCCCCGCTCCTGGGATTCGCCTACCTCAAGCCTCCAT 2980
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 2981 TCTCCATCCGCTGCGTGGAGGTGTCGGACGATCAGGACACCGGGGACACTCTGGGCAGCGTCCTCCGGGGCTTC 3054
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 3055 TTCACCATCCGCAAGCGGGAGCCAGGCGGCCGCCTGCCCACCTCCTCCACCTGCTTCAACCTGCTCAAGCTGCC 3128
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 3129 CAACTACAGCAAGAAGAGCGTCCTCCGCGAGAAGCTGCGCTACGCCATCAGCATGAACACGGGCTTTGAACTCT 3202
Sbjct 3466 -------------------------------------------------------------------------- 3465
Query 3203 CC 3204
Sbjct 3466 -- 3465