Nucleotide Global Alignment

Description

• Query: TRCN0000479556
• Subject: XM_006539730.2
• Aligned Length: 1425
• Identities: 839
• Gaps: 504

Alignment

Query    1  ATGTCGGACTTCGACGAGTTCGAGCGGCAGCTCAACGAGAATAAACAAGAGCGGGACAAGGAGAACCGGCATCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAAGCGCAGCCACAGCCGCTCTCGGAGCCGGGACCGCAAACGCCGGAGCCGGAGCCGCGACCGGCGCAACCGGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACCAGCGGAGCGCCTCCCGGGACAGGCGACGACGCAGCAAACCTTTGACCAGAGGCGCTAAAGAGGAGCACGGT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGACTGATTCGTTCCCCCCGCCACGAGAAGAAGAAGAAGGTCCGTAAATACTGGGACGTGCCACCCCCAGGCTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGAGCACATCACCCCAATGCAGTACAAGGCCATGCAAGCTGCGGGTCAGATTCCAGCCACTGCTCTTCTCCCCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CCATGACCCCTGACGGTCTGGCTGTGACCCCAACGCCGGTGCCCGTGGTCGGGAGCCAGATGACCAGACAAGCC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CGGCGCCTCTACGTGGGCAACATCCCCTTTGGCATCACTGAGGAGGCCATGATGGATTTCTTCAACGCCCAGAT  518
                                                            ||||||||.|||||||||||||||||
Sbjct    1  ------------------------------------------------ATGATGGACTTCTTCAACGCCCAGAT  26

Query  519  GCGCCTGGGGGGGCTGACCCAGGCCCCTGGCAACCCAGTGTTGGCTGTGCAGATTAACCAGGACAAGAATTTTG  592
            ||||.||||.|||.||||.||||||||||||||||||||.||||||||||||||.||.||.|||||||||||||
Sbjct   27  GCGCTTGGGAGGGTTGACTCAGGCCCCTGGCAACCCAGTCTTGGCTGTGCAGATAAATCAAGACAAGAATTTTG  100

Query  593  CCTTTTTGGAGTTCCGCTCAGTGGACGAGACTACCCAGGCTATGGCCTTTGATGGCATCATCTTCCAGGGCCAG  666
            ||||||||||||||||.||||||||.|||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct  101  CCTTTTTGGAGTTCCGGTCAGTGGATGAGACGACCCAGGCCATGGCATTTGATGGCATCATCTTCCAGGGCCAG  174

Query  667  TCACTAAAGATCCGCAGGCCTCACGACTACCAGCCGCTTCCTGGCATGTCAGAGAACCCCTCCGTCTATGTGCC  740
            |||.|.|||||.||.||||||||.|||||.|||||..|.|||||||||||||||||||||||.||.||||||||
Sbjct  175  TCATTGAAGATTCGAAGGCCTCATGACTATCAGCCATTGCCTGGCATGTCAGAGAACCCCTCTGTTTATGTGCC  248

Query  741  TGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACG  814
            |||.|||||.||||||||.|||||.||.||||||||||||||||||||||||||.||.|||||.|||||.||.|
Sbjct  249  TGGAGTTGTATCCACTGTAGTCCCAGATTCTGCCCACAAGCTGTTCATCGGGGGTTTGCCCAATTACCTAAATG  322

Query  815  ATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACG  888
            ||||||||||.||||||||||||||||||||||||||.|||||||||||||||.||||.|||||.||||||||.
Sbjct  323  ATGACCAGGTAAAAGAGCTGCTGACATCCTTTGGGCCTCTCAAGGCCTTCAACTTGGTTAAGGATAGTGCCACA  396

Query  889  GGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAA  962
            |||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  397  GGGCTCTCCAAGGGCTATGCCTTCTGTGAGTACGTGGACATCAACGTCACAGATCAGGCCATTGCGGGGCTGAA  470

Query  963  CGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCT-----  1031
            .||.||||||||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||     
Sbjct  471  TGGGATGCAGCTAGGGGACAAGAAGCTGCTTGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGGTGA  544

Query 1032  -------GAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATG  1098
                   ||||||||||||||||||.|||||||||||.||||||||.|||.||||||||||.||||||||||||
Sbjct  545  GCCTCCCGAGCACCATCAATCAGACACCTGTGACCCTTCAAGTGCCCGGCCTGATGAGCTCTCAGGTGCAGATG  618

Query 1099  GGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTA  1172
            |||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  619  GGCGGTCACCCAACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGATGAGGAGTA  692

Query 1173  TGAGGAGATCGTGGAGGATGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGC  1246
            |||||||||.||.|||||.||.||.|||||||||||||||||.|||.|.|||||.|||||.||.||.|||||.|
Sbjct  693  TGAGGAGATTGTAGAGGACGTACGAGACGAGTGCAGCAAGTATGGGTTGGTCAAATCCATTGAAATTCCCCGCC  766

Query 1247  CTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAA  1320
            |.||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  767  CCGTGGACGGCGTCGAGGTGCCTGGCTGTGGAAAGATCTTCGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAA  840

Query 1321  GCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTA  1394
            |||||||||||.||.||.||.|||||||||||||||||||||||.||||||||||||||||||||.||.|||||
Sbjct  841  GCCATGCAGGGTCTAACCGGTCGCAAGTTCGCCAACAGAGTGGTGGTCACAAAATACTGTGACCCTGATTCTTA  914

Query 1395  TCACCGCCGGGACTTCTGG  1413
            .|||||.||||||||||||
Sbjct  915  CCACCGTCGGGACTTCTGG  933