Nucleotide Global Alignment

Description

Query:
TRCN0000479593
Subject:
XR_001751398.2
Aligned Length:
3829
Identities:
1686
Gaps:
2143

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCTTGGCGGGAAGGCGCCGGCCGCTAAGAAGCCGAAAGATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAAAGAAAATCAAAACATCGCTTATGTGTCTCTGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCTATCTTGCCCCCTTTTCACTCAGTAATTACCAGCT  222

Query    1  ----------ATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAA  64
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAA  296

Query   65  TAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAA  138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAA  370

Query  139  AATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCAG  212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCAG  444

Query  213  TGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCATCCCTGGATTTTTCGGGATTGT  286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCATCCCTGGATTTTTCGGGATTGT  518

Query  287  CACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAG  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAG  592

Query  361  TCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGA  434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGA  666

Query  435  AAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAGTTTCATTACCAGCAGCTC  508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAGTTTCATTACCAGCAGCTC  740

Query  509  CAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCCTTTAGAAATGACTTCTGAAAAT  582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCCTTTAGAAATGACTTCTGAAAAT  814

Query  583  CAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAA  656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAA  888

Query  657  CACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATTTAAATGGCATGGTCATTAGTGAAGATACCG  730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATTTAAATGGCATGGTCATTAGTGAAGATACCG  962

Query  731  TTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCTCCATCCATCAGAAACTAGAACTTTGGTAGCAGTT  804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCTCCATCCATCAGAAACTAGAACTTTGGTAGCAGTT  1036

Query  805  GGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCA  878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCA  1110

Query  879  TCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATG  952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATG  1184

Query  953  ATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTT  1026
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTT  1258

Query 1027  TCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGT  1100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGT  1332

Query 1101  GGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATG  1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATG  1406

Query 1175  TCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTG  1248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTG  1480

Query 1249  AATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACC  1322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACC  1554

Query 1323  TCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTT  1396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTT  1628

Query 1397  CTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG  1470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG  1702

Query 1471  TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCCATGA  1544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCCATGA  1776

Query 1545  GACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCATGCACCCAA  1618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCATGCACCCAA  1850

Query 1619  CTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAAAGCTGC------  1686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1851  CTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAAAGCTGCTGAGTT  1924

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 1925  TTTGGTTTAGGAACATCAATTTGTTCAAATTGACCACTGTCTAAGGAGCCTAGTAATCGGCGTGCCTTAGTGTG  1998

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 1999  TTTATGTGGTAATGTGTTACATTTAGCAATTATAACATTGTTTTATTAATAAGACTATAAGAAGAGTGTACTTT  2072

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2073  TAGTAAGGGAGAAGTCTTGGAGGGTTGCTTCTGCAGGACGGGGAGGGAATTTGAGGGGAGGCTGAGGTGCCGTC  2146

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2147  AGGACTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATAGCGCGA  2220

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2221  TCTTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCTAAGTAGCTGGGATT  2294

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2295  ACAGGCACCTGCCACCACGCCTGGCTATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGG  2368

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2369  CTGGTCTCGAGCTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGGAATTACAGGCGTGAGC  2442

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2443  CACCATGCCTGGCCATCAGAACTTGTAATCAAGACAGTATGTTGAGAAATTCTAACATTATAAATTACAAAGCT  2516

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2517  TTGACTATTAAAGTTTTTGTGATCTAATGATACAGTTTTGATTCTATAGTAATTTGTGGCTTATTTTATAGTTT  2590

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2591  ATAATGAATACTTATTTCTAGACTCATACACTGGAAGGGGACCCGGAAAGGTAATGTAACTCAGTGATTTTAAA  2664

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2665  ACTTGATTTTTTTAACTGAGAACTTTTTTTGCCCCCTGCCTGTAGGTTAAGTCTTACGTGAAATGCCAAGATAA  2738

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2739  TTGCTGAGCAGCTTTGGTTACCCAGGGCGGGGTCTGGGTCTGTCTGTACTTTGCCTTTACTCTAGATGGCTCCT  2812

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2813  GAGACACAGGCAGGACTCCCAAGCACCGGGTTGGGATCTGCCCTGGTCCCGGCATTCCAGTATAAGATTGCCTC  2886

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2887  AGACCTGTGTTTTTCAGACTGGGTTTTTGCTCTTCACATGAAATCAAGTTAGATGACAATGACTGGTGTTGAAA  2960

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 2961  AAAATGAAAAGGAAAGAATTTGTAAAGAACAGAAAATATATTTGATACCATGGGTAATGGATAAAGAAGTTAAA  3034

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3035  GCTACTGCTTAGAATGAAGAAGGCCCCAGGCTTACCTGTCCCGATCTTTAAACTGTCCGAAGGAAATTCAATAG  3108

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3109  CCTGTTAAGTGAATACCTTCATTCTTACTTGTATTTGGGGGAATATTATGAAATACTCACCACTTTTGGTATTT  3182

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3183  TATGAAAATGTTTTCTTTTCAGAAGTTATGGTAATTTCAATGTGTTTGTTGTTGGGAGGGGAGCTGCCAAATCA  3256

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3257  GTTACTAATATTACTGTGTGACATCTATCCAACTTTTTTCATTATTCTTCATTGCCAAATACTGAAAGACTTGT  3330

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3331  AAATGGCTTTGGCAATATGTTTGAATTCTAAGAGGAAATATTTTCCCATAATTGTATATCAGAGAAATATAGTG  3404

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3405  ATATACAATTTCCTTGAAAACCAATTTCTAAATAATTTTCTTCTCTGTAATCTAAGTGTAAAAAGGTTTAGTTT  3478

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3479  TTTAATAGGTTTAGGTGTTTATAAGCAATAGTTCTCTATTTTCTAGTTGATATAAGTAGAAGAATTGACAAGTG  3552

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3553  AGATGGAAATGTTAATTTATAAAGGGAAAGAAAAGCTAGGTGAGGTTGAGTTATAATTAAACTGTTCAGGAAAC  3626

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3627  ATCGTAAAGGCTTTAGGCTCCCTTTTTCATTTCTATACCAATTAATCTCATGGGTTCTAGAGTGGTTAGTTCTA  3700

Query 1687  --------------------------------------------------------------------------  1686
                                                                                      
Sbjct 3701  CGGGAATTGTTTTTGTTTTTGTTTTTAAAGATGCTGAAAACTACTCTCAATCAAATTAGTACCATCATTTAAGC  3774

Query 1687  -------------------------------------------------------  1686
                                                                   
Sbjct 3775  TTTGAATACTTGGCAGTAATTGCCTGGGCTCGTCAATAAATGTTAGCAAATTCTT  3829

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