Nucleotide Global Alignment

Description

Query:
TRCN0000479707
Subject:
NM_001039211.3
Aligned Length:
1824
Identities:
1137
Gaps:
609

Alignment

Query    1  ATGCAGCTGGAAGCCCTGAACCTGCTGCACACACTAGTCTGGGCACGGAGTCTCTGCCGTGCCGGAGCTGTGCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GACACAGGAGCGGCTGTCAGGCAGTGCCAGCCCTGAGCAAGTGCCAGCTGGTGAGTGCTGTGCTCTGCAGGAGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATG----AGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCT  218
            |||    |||.||||.||.|.|.|         |.||||||      ||||                       
Sbjct    1  ATGTCAAAGGACGCCCTGAATCTG---------GCGCAGAT------GCAG-----------------------  36

Query  219  GAGCGAGGAGACCCGGC------AGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACG  286
                |||.||||.|.||      ||||.|||.|                  ||||||       ||        
Sbjct   37  ----GAGCAGACGCTGCAGTTGGAGCAACAGTC------------------CAAGCT-------CA--------  73

Query  287  AGGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAG  360
                              |.||||||.|||||||||   ||||||||||||||||||||||||||||||     
Sbjct   74  ------------------AACAACTTGTCAATGAGG---ATTTACGGAAGCAGGAGGAGTCCGTGCAGA-----  121

Query  361  GAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGAC  434
                                                                                      
Sbjct  122  --------------------------------------------------------------------------  121

Query  435  CGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGT  508
                                                                                      
Sbjct  122  --------------------------------------------------------------------------  121

Query  509  CCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTT  582
               ||||||.|||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  122  ---AGCACCATCAGACCTTCTTGGAGTCCATCAGGGCGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTT  192

Query  583  GTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAA  656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  193  GTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAA  266

Query  657  GAATGCGACAGCCGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCC  730
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  267  GAATGCGACAGCCGTCACTGGCCGCTACATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCC  340

Query  731  GCATCACGGTGCTGGAGGCGCTGCGGCACCCCATC---CAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGAC  801
            |||||||||||||.|||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||
Sbjct  341  GCATCACGGTGCTTGAGGCGCTGCGGCACCCCATCCAGCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGAC  414

Query  802  GTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACAC  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||...||.|||||||.
Sbjct  415  GTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAATGACAAGGAACAT  488

Query  876  CAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCA  949
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  489  CAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCA  562

Query  950  AGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAA  1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  563  AGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAA  636

Query 1024  GGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGA  1097
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||
Sbjct  637  GGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGA  710

Query 1098  AGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCC  1171
            |||.||||||||||||||||||||||||||||||.||||||||.||||||||||.|||||||||||||||||||
Sbjct  711  AGCGGACGCCTTCCTTCGGAAGCGAGCCACTGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCC  784

Query 1172  TGTACCACATGGGCCAACACAGCAACAAATTCATGCTGGTCCTGGCCAGCAATCTG----CCTGAGCAGTTCGA  1241
            ||||||.||.||||||.|||||||||||||||||||||.||||||||||    |||    ||.|||||||||||
Sbjct  785  TGTACCGCACGGGCCAGCACAGCAACAAATTCATGCTGATCCTGGCCAG----CTGCCACCCCGAGCAGTTCGA  854

Query 1242  CTGTGCCATCAACAGCC-GCATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTG  1314
            |||.|||||||| .||| ||||.||||||||||||||||||||||||||...||||||||||||||.|||||||
Sbjct  855  CTGGGCCATCAA-TGCCTGCATCGACGTGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAGCGGGCGCGCCTG  927

Query 1315  GTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTT  1388
            ||||||.||.||.||.||.|.|.|||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct  928  GTGAGAATGTATCTTAACGAGTATGTTCTTAAGCCGGCCACAGAAGGAAAGCGGCGTCTGAAGCTGGCCCAGTT  1001

Query 1389  TGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGG  1462
            ||||||||||||||||||||..|||.|||||||||||||.|||||||||||..|||||.|||||||.|||||||
Sbjct 1002  TGACTACGGGAGGAAGTGCTTAGAGATCGCTCGGCTGACAGAGGGCATGTCATGCCGGAAGATCGCACAGCTGG  1075

Query 1463  CCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTG  1536
            ||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||||||||||||||.|||
Sbjct 1076  CCGTGTCCTGGCAGGCCACGGCGTATGCCTCCAAGGACGGGGTCCTGACCGAGGCCATGATGGACGCCTGCGTG  1149

Query 1537  CAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCA  1610
            |||||...||||||||||.|||..||||.|||||||||||||||||.||||.|||||||||.||.||.||||||
Sbjct 1150  CAAGACTTTGTCCAGCAGCACCAGCAGATGATGCGCTGGCTGAAGGGGGAGAGGCCTGGGCCCGAGGACGAGCA  1223

Query 1611  CCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTG  1684
            .|||..||||                                                                
Sbjct 1224  ACCCTCATCC----------------------------------------------------------------  1233

Query 1685  CCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATG  1758
                                                                                      
Sbjct 1234  --------------------------------------------------------------------------  1233

Query 1759  TCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG  1806
                                                            
Sbjct 1234  ------------------------------------------------  1233

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