Nucleotide Global Alignment
Description
- Query:
- TRCN0000479791
- Subject:
- NM_001253887.1
- Aligned Length:
- 2131
- Identities:
- 1235
- Gaps:
- 785
Alignment
Query 1 ATGTCTGTTCCATCATCACTGAGCCAGTCGGCCATTAATGCCAACAGCCACGGAGGCCCCGCACTGAGCCTACC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCTGCCTCTGCACGCTGCCCACAACCAGCTGCTCAACGCCAAGCTGCAGGCCACAGCTGTGGGACCCAAGGACC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCGCAGCGCCATGGGGGAGGGTGGTGGGCCTGAGCCAGGCCCTGCCAATGCCAAGTGGCTAAAAGAGGGCCAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AACCAGCTCCGGCGGGCCGCCACGGCCCACCGTGACCAGAATCGCAATGTGACCTTGACCTTGGCGGAGGAGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGCCAGGAGCCTGAGATGGCACCCTTGGGCCCCAAAGGCCTGATACACCTGTACTCTGAGCTGGAGCTCTCAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTCACAACGCAGCCAACCGAGGCCTACGAGGACCTGGCCTGATCATCAGCACTCAAGAGCAGGGGCCAGATGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGAGAGGAGAAGGCGGCCGGGGAGGCCGAGGAGGAGGAGGAGGATGATGATGATGAAGAGGAGGAGGAGGACTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ATCTTCTCCCCCAGGGCTGCCTGAGCCCCTGGAGAGTGTGGAGGCCCCTCCCAGGCCCCAAGCCCTTACAGATG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCCCCGGGAACACAGCAAGAGTGCCAGCCTCCTGTTTGGCATGCGGAACAGTGCAGCCAGTGATGAGGACTCA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AGCTGGGCTACCTTATCCCAGGGCAGCCCCTCCTATGGCTCCCCAGAGGACACAGATTCCTTCTGGAACCCCAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CGCCTTCGAGACGGATTCCGACCTGCCGGCTGGATGGATGAGGGTCCAGGACACCTCAGGGACCTATTACTGGC 814
||||||||.||||||||||||||||||||.|||||||
Sbjct 1 -------------------------------------ATGAGGGTACAGGACACCTCAGGGACCTACTACTGGC 37
Query 815 ACATCCCAACAGGGACCACCCAGTGGGAACCCCCCGGCCGGGCCTCCCCCTCACAGGGGAGCAGCCCCCAAGAG 888
||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.
Sbjct 38 ACATCCCAACAGGGACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCCTCACAGGGGAGCAGCCCCCAAGAA 111
Query 889 GAGTCCCAGCTCACCTGGACAGGTTTTGCTCATGGAGAAGGCTTTGAGGATGGAGAATTTTGGAAGGATGAACC 962
||||||||||||||||||||.||.||||||||...|||||||||||||||.|||||.|||||||||||||||||
Sbjct 112 GAGTCCCAGCTCACCTGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAAGGAGAGTTTTGGAAGGATGAACC 185
Query 963 CAGTGATGAGGCCCCAATGGAGCTGGGACTGAAGGAACCTGAGGAGGGGACGTTGACCTTCCCAGCTCAGAGCC 1036
||||||.|||||||||||||||.|||||||||||||.||.|||||||.|||.|||.||||||||||||||||||
Sbjct 186 CAGTGAGGAGGCCCCAATGGAGTTGGGACTGAAGGACCCCGAGGAGGCGACATTGTCCTTCCCAGCTCAGAGCC 259
Query 1037 TCAGCCCAGAGCC-GTTGCCCCAAGAGGAGGAGAAGCTTCCCCCACGGAATACCAACCCAGGGATCAAGTGTTT 1109
||||||||||.|| ||| |||||.|||||.||||||||..|||.|||||||.||||||||||||||||||||||
Sbjct 260 TCAGCCCAGAACCAGTT-CCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTGTTT 332
Query 1110 CGCCGTGCGCTCCCTAGGCTGGGTAGAGATGACCGAGGAGGAGCTGGCCCCTGGACGCAGCAGTGTGGCAGTCA 1183
|||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 333 CGCTGTGCGCTCCCTAGGCTGGGTAGAGATGACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTGGCAGTCA 406
Query 1184 ACAATTGCATCCGTCAGCTCTCTTACCACAAAAACAACCTGCATGACCCCATGTCTGGGGGCTGGGGGGAAGGA 1257
|||||||.|||||.||||||||.||||||||||||||.||.|||||.||.|||.|||||||||||||.||.|||
Sbjct 407 ACAATTGTATCCGCCAGCTCTCCTACCACAAAAACAATCTACATGATCCGATGGCTGGGGGCTGGGGAGAGGGA 480
Query 1258 AAGGATCTGCTACTGCAGCTGGAGGATGAGACACTAAAGCTAGTGGAGCCACAGAGCCAGGCACTGCTGCACGC 1331
|||||||||||.||.|||||||||||.|||||.||||||.|.|||||||||||||.||||.|.||||||||.||
Sbjct 481 AAGGATCTGCTGCTCCAGCTGGAGGACGAGACTCTAAAGTTGGTGGAGCCACAGAACCAGACGCTGCTGCATGC 554
Query 1332 CCAACCCATCATCAGCATCCGCGTGTGGGGCGTCGGGCGGGACAGTGGA------AGGGACTTTGCCTACGTAG 1399
.||.||||||.|||||||.||.|||||||||||.||||||||||||||| |||||||||||||||||||
Sbjct 555 ACAGCCCATCGTCAGCATTCGTGTGTGGGGCGTTGGGCGGGACAGTGGAAGAGAGAGGGACTTTGCCTACGTAG 628
Query 1400 CTCGTGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATCGCCACC 1473
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 CTCGAGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATCGCCACC 702
Query 1474 AGCCTGCATGAGATCTGCTCTAAGATCATGGCCGAACGGCGTAATGCCCGCTGCTTGGTAAATGGACTCTCCCT 1547
||||||||||||||||||||.|||||||||.|.||||||||.|||||.|||||||||||.||||||||||||||
Sbjct 703 AGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCCT 776
Query 1548 GGACCACTCTAAACTTGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCGCCTAAGAATGAGTTGGTCCAGAAGT 1621
.||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||||||.||||.|||||||
Sbjct 777 AGACCACTCTAAACTCGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGCAGAAGT 850
Query 1622 TCCAAGTCTATTACCTGGGGAATGTACCTGTTGCTAAACCTGTTGGGGTAGATGTGATTAATGGGGCCCTCGAG 1695
|||||||||||||||||||.|||||.||.|||||||||||||||||||||||.|||||||||||||||||.|||
Sbjct 851 TCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGAG 924
Query 1696 TCAGTCCTGTCCTCCAGCAGCCGTGAACAATGGACCCCAAGTCATGTCAGTGTGGCCCCTGCTACCCTCACCAT 1769
|||||||||||.|||||.||||||||.||.|||||.||||||||.|||||.|||||||||||.|||||||||||
Sbjct 925 TCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCACCCTCACCAT 998
Query 1770 CTTGCACCAGCAGACAGAGGCAGTGCTGGGAGAGTGTCGGGTGCGTTTCCTCTCCTTCCTGGCCGTGGGCAGAG 1843
||||||||||||||||||.||.||||||||.|||||.||||||||.||.||||||||||||||.||||||||||
Sbjct 999 CTTGCACCAGCAGACAGAAGCGGTGCTGGGGGAGTGCCGGGTGCGGTTTCTCTCCTTCCTGGCTGTGGGCAGAG 1072
Query 1844 ATGTCCACACGTTTGCATTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGCCACATGTTCTGGTGCGAGCCC 1917
||||.|||||.||.||.|||||||||||||||||||||||||||||||||||.||||||||.|||||.||||||
Sbjct 1073 ATGTGCACACATTCGCGTTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGAGCCC 1146
Query 1918 AATGCTGCCAGCCTCTCAGAGGCTGTGCAGGCTGCGTGCATGCTTCGCTACCAGAAGTGTCTGGATGCCCGTTC 1991
|||||||||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.||
Sbjct 1147 AATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGAAGTGTCTGGATGCTCGCTC 1220
Query 1992 CCAGGCCTCCACCTCCTGCCTCCCAGCACCCCCTGCTGAGTCTGTGGCACGGCGTGTAGGGTGGACTGTCCGCA 2065
||||.|||||||||||||||||||||||||||||||.|||||.||.|||.|.||||||||||||||.|||||||
Sbjct 1221 CCAGACCTCCACCTCCTGCCTCCCAGCACCCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGACAGTCCGCA 1294
Query 2066 GGGGTGTTCAGTCGCTGTGGGGCTCCCTGAAGCCCAAACGGCTGGGGGCCCATACCCCA 2124
||||||||||||||||||||||.|||||.|||||||||||.|||||..||||.||||||
Sbjct 1295 GGGGTGTTCAGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCA 1353
