Nucleotide Global Alignment

Description

Query:
TRCN0000479852
Subject:
XR_379436.3
Aligned Length:
964
Identities:
521
Gaps:
369

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  TAGGTGTCATGTGATCACAGAGTCAGCTGACCTGAGTCAAGCCGGAAGAAGCTCTGGATTGGATCTCCTGACAT  74

Query   1  -ATGAGGTTCCGGTTCTGTGGTGATCTGGACTGTCCCGACTGGGTCCTGGCAGAAATCAGCACGCTGGCCAAGA  73
            ||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||.||||||||.|
Sbjct  75  CATGAGGTTCCGGTTCTGTGGCGATCTGGACTGTCCCGACTGGGTCCTGGCAGAGATCAGCACACTGGCCAAAA  148

Query  74  TGTCCTCTGTGAAGTTGCGGCTGCTCTGCAGCCAGGTACTAAAGGAGCTGCTGGGACAGGGGATTGATTATGAG  147
           |.||||||||||||.||||.|||||.||.||||||||.|||||||||||.|||||.||||||||||||||||||
Sbjct 149  TTTCCTCTGTGAAGCTGCGACTGCTGTGTAGCCAGGTGCTAAAGGAGCTTCTGGGTCAGGGGATTGATTATGAG  222

Query 148  AAGATCCTGAAGCTCACGGCTGACGCCAAGTTTGAGTCAGGCGATGTGAAGGCCACAGTGGCAGTGCTGAGTTT  221
           ||||||.|||||||.||.|||||.||||||||||||||.||.||.|||||||||||.||.||.|||||||||||
Sbjct 223  AAGATCTTGAAGCTTACTGCTGATGCCAAGTTTGAGTCTGGAGACGTGAAGGCCACGGTCGCGGTGCTGAGTTT  296

Query 222  CATCCTCTCCAGTGCGGCCAAGCACAGTGTCGATGGCGAATCCTTGTCCAGTGAACTGCAGCAGCTGGGGCTGC  295
           ||||||.||||||||.||||||||.||||||||..|.||.||||||||||||||.|||||||||||||||||||
Sbjct 297  CATCCTGTCCAGTGCAGCCAAGCATAGTGTCGACAGTGATTCCTTGTCCAGTGAGCTGCAGCAGCTGGGGCTGC  370

Query 296  CCAA----------------------------------------------------------------------  299
           ||||                                                                      
Sbjct 371  CCAAAGCCTGAGACCCACCCCTTAAGCCCAGTGCCAGTCTCCACCCGCCACCTCAGCAGAGCCCCCTCAGAGCT  444

Query 300  ------------AGAGCACGCGGCCAGCCTGTGCCGCTGTTATGAGGAGAAGCAAAGCCCCTTGCAGAAGCACT  361
                       ||||||.||..|||||||||||||||||||.||.||||||||.||||||.|||||.|||||.
Sbjct 445  CCGTCTGCCTGCAGAGCATGCCACCAGCCTGTGCCGCTGTTACGAAGAGAAGCAGAGCCCCCTGCAGGAGCACC  518

Query 362  TGCGGGTCTGCAGCCTACGCATGAATAGGTTGGCAGGTGTGGGCTGGCGGGTGGACTACACCCTGAGCTCCAGC  435
           |.||||.|||.||||||||..||||.|||.||||..|.||||||||||||||.|||||||||||||||||||||
Sbjct 519  TTCGGGCCTGTAGCCTACGTGTGAACAGGCTGGCCAGCGTGGGCTGGCGGGTAGACTACACCCTGAGCTCCAGC  592

Query 436  CTGCTGCAATCCGTGGAAGAGCCCATGGTGCACCTGCGGCTGGAGGTGGCAGCTGCCCCAGGGACCCCAGCCCA  509
           |||||.||.||.|||||.|||||||||||.||.||||.|||..||||.|...||||.|||||.||||..|||||
Sbjct 593  CTGCTTCATTCTGTGGAGGAGCCCATGGTACATCTGCAGCTACAGGTTGTGCCTGCTCCAGGTACCCAGGCCCA  666

Query 510  GCCTGTTGCCATGTCCCTCTCAGCAGACAAGTTCCAGGTCCTCCTGGCAGAACTGAAGCAGGCCCAGACCCTGA  583
           .||||||.|||||||||||||.|||||||||||||||||.||||||||||||||||||||.|||||||||.|||
Sbjct 667  ACCTGTTTCCATGTCCCTCTCGGCAGACAAGTTCCAGGTTCTCCTGGCAGAACTGAAGCAAGCCCAGACCATGA  740

Query 584  TGA--GCTCCCTGGGC----------------------------------------------------------  597
           |||  |||  .|||||                                                          
Sbjct 741  TGACTGCT--TTGGGCTGAGAAGAGTGTTCCCAGCCTCTGTGAGGCCTCTCTGCCTGCACTGAGTGGCTGCCCT  812

Query 598  --------------------------------------------------------------------------  597
                                                                                     
Sbjct 813  CCACACGCCTCTTACTAGGGTGGCCCTGGCCTCTTAGTCCTGGTTAGGGCTACTGGGGATCGTCCCCAAAATTG  886

Query 598  --------------------------------------------------------------------------  597
                                                                                     
Sbjct 887  CCTTCTTTCTTTTGAAAGAAAGTACTTGCCAACCATTTTTATAGGCAAGAAGAATAAACAAGTGTACAGCAATG  960

Query 598  --  597
             
Sbjct 961  TG  962