Nucleotide Global Alignment
Description
- Query:
- TRCN0000480078
- Subject:
- XM_011516915.2
- Aligned Length:
- 2500
- Identities:
- 1481
- Gaps:
- 977
Alignment
Query 1 ------------------------------------------------ATGTCATACGGATCCATCGCCCGTGG 26
||||||||||||||||||||||||||
Sbjct 1 ATGAACATGCTCAGTGTGGAGGCTGCTGGCCCTGCCATCTGTAAGAAGATGTCATACGGATCCATCGCCCGTGG 74
Query 27 AGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGGCTGTCAGCCCCTAGAGTGCGCTAGAT 148
Query 101 GTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGG 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGG 222
Query 175 AAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGT 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGT 296
Query 249 TGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTG 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCATTGGCCCGAGGAAGGACTCGGCTGCTG 370
Query 323 GGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAG 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAG 444
Query 397 ACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCC 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCC 518
Query 471 CACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTG 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGCGCTGGGCTACTGTCGCCGCGACGTTG 592
Query 545 TGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCC 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCC 666
Query 619 CATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACGCCCGTGGAGCAGGTGGTGGCCAAGAC 740
Query 693 CTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCA 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCA 814
Query 767 ACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGG 888
Query 841 AGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGAC 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGAC 962
Query 915 CAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGG 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGG 1036
Query 989 AGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGA 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGA 1110
Query 1063 GTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAG 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAG 1184
Query 1137 TCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCC 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCC 1258
Query 1211 AGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTG 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTG 1332
Query 1285 CAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGA 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGA 1406
Query 1359 AGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGTCCTC--GCATGCGGAGGCAGCCCGCC 1420
|||||||| ..||.|...|||||| |||...|| |||||..||.| ||..||.|.||||||||..|
Sbjct 1407 AGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGC 1480
Query 1421 AGCT-----CCTGGCTGGAGC----CAGCC---------GGCACCAACTCC-------AGAGACACAAGATCAA 1469
.||| ||.|||.|| || ||.|| |||.||.||||| |||.||.||||..|||
Sbjct 1481 TGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAA 1553
Query 1470 ----------------------GTGCTGCTTC----------------CTATCAGCTGGAG-TCACTGCCCTGC 1504
||||||.|.| |||.|.||||..| ||...||.||||
Sbjct 1554 CTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGC 1627
Query 1505 TTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG------------------------------------ 1542
..|.|| ||| |||.|||||||
Sbjct 1628 GGGGCA----------------CAC--CTGCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAAC 1683
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1684 GCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAA 1757
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1758 GAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTT 1831
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1832 CTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAACTGATGAGGAGGACGAGACCCCCAGC 1905
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1906 TGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAACCTGACCCCCTGGACTTACGAGGAGT 1979
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1980 CTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCCCAGCCTCCACCCCACCAGCAACCACACTCATGG 2053
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2054 GGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCA 2127
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2128 TCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGC 2201
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2202 CCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGG 2275
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2276 CCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCC 2349
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2350 TCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCTGGAGGCTCCCAGGACAGCCCCAAGGG 2423
Query 1543 ---------------------------------------------------------- 1542
Sbjct 2424 CACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGAGGAGGAGATA 2481
