Nucleotide Global Alignment

Description

Query:
TRCN0000480128
Subject:
XM_006499946.2
Aligned Length:
1770
Identities:
1406
Gaps:
171

Alignment

Query    1  ATGGCGGGGGCCGTGCCGGGCGCCATCATGGACGAGGACTACTACGGGAGCGCGGCCGAGTGGGGCGACGAGGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGACGGCGGCCAGCAGGAGGATGATTCTGGAGAAGGAGAGGATGATGCGGAGGTTCAGCAAGAATGCCTGCATA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AATTTTCCACCCGGGATTATATCATGGAACCCTCCATCTTCAACACTCTGAAGAGGTATTTTCAGGCAGGAGGG  222
                                   |||||.||||||||||||||||||||||||||||||||.||||||||||||
Sbjct    1  -----------------------ATGGAGCCCTCCATCTTCAACACTCTGAAGAGGTATTTCCAGGCAGGAGGG  51

Query  223  TCTCCAGAGAATGTTATCCAGCTCTTATCTGAAAACTACACCGCTGTGGCCCAGACTGTGAACCTGCTGGCCGA  296
            ||||||||.||.||.|||||||||||||||||.||||||||.||.|||||||||||.||||||||||||||.||
Sbjct   52  TCTCCAGAAAACGTCATCCAGCTCTTATCTGAGAACTACACGGCAGTGGCCCAGACAGTGAACCTGCTGGCTGA  125

Query  297  GTGGCTCATTCAGACAGGTGTTGAGCCAGTGCAGGTTCAGGAAACTGTGGAAAATCACTTGAAGAGTTTGCTGA  370
            ||||||||||||||||||.||||||||.||||||||.|||||.|||||||||||.|||||||||||||||||||
Sbjct  126  GTGGCTCATTCAGACAGGCGTTGAGCCTGTGCAGGTGCAGGAGACTGTGGAAAACCACTTGAAGAGTTTGCTGA  199

Query  371  TCAAACATTTTGACCCCCGCAAAGCAGATTCTATTTTTACTGAAGAAGGAGAGACCCCAGCGTGGCTGGAACAG  444
            ||||.||.||.|||||.||.|||||||||||||||||.|||||||||||||||||||||||.|||||.||.|||
Sbjct  200  TCAAGCACTTCGACCCTCGGAAAGCAGATTCTATTTTCACTGAAGAAGGAGAGACCCCAGCTTGGCTTGAGCAG  273

Query  445  ATGATTGCACATACCACGTGGCGGGACCTTTTTTATAAACTGGCTGAAGCCCATCCAGACTGTTTGATGCTGAA  518
            |||||.|||||.||.||.|||.|.||.||.||||||||..||||.||.||||||||.||||||||||||||.||
Sbjct  274  ATGATCGCACACACAACATGGAGAGATCTGTTTTATAAGTTGGCCGAGGCCCATCCTGACTGTTTGATGCTCAA  347

Query  519  CTTCACCGTTAAGCTTATTTCTGACGCAGGGTACCAGGGGGAGATCACCAGTGTGTCCACAGCATGCCAGCAGC  592
            ||||||.||.|||||.||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||||||.
Sbjct  348  CTTCACTGTGAAGCTCATTTCTGATGCGGGGTACCAAGGGGAGATCACCAGCGTGTCCACAGCCTGCCAGCAGT  421

Query  593  TAGAAGTGTTCTCGAGAGTGCTCCGGACCTCTCTAGCTACAATTTTAGATGGAGGAGAAGAAAACCTTGAAAAA  666
            |.|||||||||||.||||||||.||||||||||||||.||.||.||.|||||.|||||||||||||||||.|||
Sbjct  422  TGGAAGTGTTCTCCAGAGTGCTTCGGACCTCTCTAGCCACGATCTTGGATGGGGGAGAAGAAAACCTTGAGAAA  495

Query  667  AATCTCCCTGAGTTTGCTAAGATGGTGTGCCACGGGGAGCACACGTACCTGTTTGCCCAGGCCATGATGTCCGT  740
            |||||||||||||||||.||||||||.|||||.||.||||||||||||||||||||.|||||||||||||||||
Sbjct  496  AATCTCCCTGAGTTTGCAAAGATGGTATGCCATGGCGAGCACACGTACCTGTTTGCACAGGCCATGATGTCCGT  569

Query  741  GCTGGCCCAGGAGGAGCAGGGGGGCTCCGCTGTGCGCAGGATCGCCCAGGAAGTGCAGCGCTTTGCCCAGGAGA  814
            ||||||.||||||||.|||||.||.||.||.|||||||||.||||.||||||||.||||||||.||||||||||
Sbjct  570  GCTGGCACAGGAGGAACAGGGTGGTTCTGCAGTGCGCAGGGTCGCTCAGGAAGTCCAGCGCTTCGCCCAGGAGA  643

Query  815  AAGGTCATGACGCCAGTCAGATCACACTAGCCTTGGGCACAGCTGCCTCCTACCCCAGGGCCTGCCAGGCTCTC  888
            |.||.|||||.||||||||||||||.||.|||||||||||||||||||||||||||.|.||||||||.||.||.
Sbjct  644  AGGGCCATGATGCCAGTCAGATCACGCTGGCCTTGGGCACAGCTGCCTCCTACCCCCGAGCCTGCCAAGCGCTT  717

Query  889  GGGGCCATGCTGTCCAAAGGAGCCCTGAACCCTGCTGACATCACCGTCCTGTTCAAGATGTTCACAAGCATGGA  962
            ||.|||||||||||||.||||||||||||.|||||.||||||||.|||.||||||||||||||||.||||||||
Sbjct  718  GGCGCCATGCTGTCCAGAGGAGCCCTGAATCCTGCAGACATCACGGTCTTGTTCAAGATGTTCACCAGCATGGA  791

Query  963  CCCTCCTCCGGTTGAACTTATCCGCGTTCCAGCCTTCCTGGACCTGTTCATGCAGTCACTCTTTAAACCAGGGG  1036
            |||||||||.||.|||||.|||||.||.||.||||||||||||||||||||||||||.|||||.||.|||||||
Sbjct  792  CCCTCCTCCCGTGGAACTCATCCGGGTGCCGGCCTTCCTGGACCTGTTCATGCAGTCGCTCTTCAAGCCAGGGG  865

Query 1037  CTCGGATCAACCAGGACCACAAGCACAAATACATCCACATCTTGGCGTACGCAGCAAGCGTGGTTGAGACCTGG  1110
            |...||||||||||||||||||.|||||.||||||||||||.||||.|||||.||.||.|||||||||||||||
Sbjct  866  CCAAGATCAACCAGGACCACAAACACAAGTACATCCACATCCTGGCTTACGCTGCCAGTGTGGTTGAGACCTGG  939

Query 1111  AAGAAGAACAAGCGAGTGAGCATCAATAAAGATGAGCTGAAGTCAACGTCAAAAGCTGTCGAAACCGTTCACAA  1184
            ||||||||||||||.||.|||||....|||||.|||||.|||||.||||||||.|||.||||.||.||.|||||
Sbjct  940  AAGAAGAACAAGCGGGTCAGCATTGGCAAAGACGAGCTCAAGTCCACGTCAAAGGCTATCGAGACTGTCCACAA  1013

Query 1185  TTTGTGTTGCAACGAGAACAAAGGGGCCTCTGAACTAGTGGCAGAATTGAGCACACTTTATCAGTGTATTAGGT  1258
            ..||||.||||||||||||||||||||||||||.||.|||||.||..|||||||||||||||||||.|||.|||
Sbjct 1014  CCTGTGCTGCAACGAGAACAAAGGGGCCTCTGAGCTGGTGGCTGAGCTGAGCACACTTTATCAGTGCATTCGGT  1087

Query 1259  TTCCAGTGGTAGCAATGGGTGTGCTGAAGTGGGTGGATTGGACTGTATCAGAACCAAGGTACTTTCAGCTGCAG  1332
            ||||||||||.||.|||||.|||||.||||||||.||||||||.|||||.||.|||||||||||.|||||||||
Sbjct 1088  TTCCAGTGGTGGCGATGGGCGTGCTCAAGTGGGTAGATTGGACCGTATCGGAGCCAAGGTACTTCCAGCTGCAG  1161

Query 1333  ACTGACCATACCCCTGTCCACCTGGCGTTGCTGGATGAGATCAGCACCTGCCACCAGCTCCTGCACCCCCAGGT  1406
            |||||.||.||.||.||.||||||||.|||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162  ACTGATCACACTCCAGTTCACCTGGCCTTGTTGGATGAGATCAGCACCTGCCACCAGCTCCTGCACCCCCAGGT  1235

Query 1407  CCTGCAGCTGCTTGTTAAGCTTTTTGAGACTGAGCACTCCCAGCTGGACGTGATGGAGCAGCTTGAGTTGAAGA  1480
            .|||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||.|
Sbjct 1236  TCTGCAGCTGCTTGTTAAGCTTTTTGAGACAGAGCACTCCCAGCTAGACGTGATGGAGCAGCTCGAGTTGAAAA  1309

Query 1481  AGACACTGCTGGACAGGATGGTTCACCTGCTGAGTCGAGGTTATGTACTTCCTGTTGTCAGTTACATCCGAAAG  1554
            ||||.|||||||||||||||||.|||||||||||.||.||.||.||.||.||.||.||||||||.|||||.||.
Sbjct 1310  AGACCCTGCTGGACAGGATGGTGCACCTGCTGAGCCGCGGCTACGTCCTGCCGGTGGTCAGTTATATCCGCAAA  1383

Query 1555  TGTCTGGAGAAGCTGGACACTGACATTTCACTCATTCGCTATTTTGTCACTGAGGTGCTGGACGTCATTGCTCC  1628
            ||||||||||||||||||||.|||||.||.|||||.|||||.||||||||||||||.|||||.|||||.||.||
Sbjct 1384  TGTCTGGAGAAGCTGGACACGGACATCTCCCTCATCCGCTACTTTGTCACTGAGGTTCTGGATGTCATCGCCCC  1457

Query 1629  TCCTTATACCTCTGACTTCGTGCAACTTTTCCTCCCCATCCTGGAGAATGACAGCATCGCAGGTACCATCAAAA  1702
            |||.||.|||||.|||||.|||||.|||||||||||||||.||||.||||||||||||||.||.||||||||..
Sbjct 1458  TCCGTACACCTCAGACTTTGTGCAGCTTTTCCTCCCCATCTTGGAAAATGACAGCATCGCGGGCACCATCAAGG  1531

Query 1703  CGGAAGGCGAGCATGACCCTGTGACGGAGTTTATAGCTCACTGCAAATCTAACTTCATCATGGTGAAC  1770
            |.||.||||||||||||||.|||||||||||.||.|||||||||||.||.|||||||||.||||||||
Sbjct 1532  CAGAGGGCGAGCATGACCCCGTGACGGAGTTCATTGCTCACTGCAAGTCGAACTTCATCGTGGTGAAC  1599

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