Nucleotide Global Alignment

Description

Query:
TRCN0000480237
Subject:
XR_002957484.1
Aligned Length:
3661
Identities:
437
Gaps:
3216

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTGTATTCTTCTTTTTCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGTACTCACAGTTCTTTCCTGATCTTCCCCGCCGCCTCCTGTATTGCCTCTTTATGGAATCACTCCATATACT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGTTACACAGCATGGTTTGCCCGTGCTGCTGCCCCGCGGGCTGTCGCTTCTGACCTGCCTACACTCAGAACTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCCCAAAGCATCAGAGTAATACTGTTACTGTGATGGGTAATGGAGAAGTCGTGCTGTTCTCAGGTCGTGTTGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTGTCGCCCACGCTGGTTGCAGTGGTGCGATCTCAGTTCACTGCAACCTTCGCCTCCCAGGTTCAAGCGATTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCTGCCTCAGCTTCCCGAGCAGCTAGGACTACAGGATCTCAGCTAAACGGGAAGCATTTTTGAAAAGTGATTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CACAATTGAGAGTGAAAATTACTGAGTCCTGAACAGGCAACTTACATTCTAATACCAGCTCTGTCTCCATCCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCGACTGAATAGTCGTGATTAAGTTACTTGACTTCCTTGGATATCTAGATCCTTAAAGTTAAAGAATTATACAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATAATAATATTTTCTTCAAACTTTAGAAAATGACTTTATGAACCGCCTTAAGTTTGTATGTTTTCATAGCTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAAGAGCTTGTTTACACACTCAATTCTAGATTCTAGATACTTTCTAGAAAATAACTGACTTAACTCATTCAATT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GATATATTTGTTAGTTGTACTCCTACTCATATGCTTCAGTTAATTATATATGTTGAACAGGTAGGAAGCAGTGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGTTTTTATTTATTTTAATATGTTATTCATACATTTGAAGAATTATGTTCTTTCTGTAGGCAGCTGAATTTTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTTTTTTTGAGACGAAGTCTTGGTATTGTCCCCCTTGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCTGCCTCCTGGGTTCAGGCAATTCTCCTGCCTCAGACTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACCAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCCCGGATAATTTTTGTATTTTTAGTAGAGACAGTGTTTCACTATGTTGGCTGGGCTGGTCTCGAACTCCTGCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTCAGGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACTGGCGTGAGCCACTGCTGCCAGCCGGCAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTGAATTTTAAGACTGTGGAGCTGGCTGAGGCAGTAGATGAAACAAGATTTCTTGATGTTCCTTCCAGGTTTAT  1258

Query    1  -----------------------------------------------------------------ATGAATCGT  9
                                                                             |||||||||
Sbjct 1259  TATGCATGTATCTTTAGAGATGATTTTTTTTTAAAGACTGTGTTTATTGTATTTCAGATGCTGAGATGAATCGT  1332

Query   10  CACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCA  83
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCA  1406

Query   84  TCAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGT  157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGT  1480

Query  158  TAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAA  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAA  1554

Query  232  TATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAA  305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAA  1628

Query  306  CCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTG  379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTG  1702

Query  380  AACAAGCAATTGAAGAATTAGAATCAATGTGTAAAA--------AGACA----------GAGT--------CTT  427
            ||||||||||||||||||||||||||||||||||||        |.|||          .|||        |||
Sbjct 1703  AACAAGCAATTGAAGAATTAGAATCAATGTGTAAAAGCCTAAATAAACAAGATGAAAAGCAGTTACAAGAACTT  1776

Query  428  GCTCTGTGGCCCAGGCTGGAATGCAG------------------------------------------------  453
            ||.||        ||..|.||.|||.                                                
Sbjct 1777  GCACT--------GGAAGAAAGGCAAACCATTGATCAAAAAATCAACATGTTGTACAATGAGCTTTTCCAGAGC  1842

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1843  CTTGTGCCAAAGGAGAAATATGACAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGA  1916

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1917  CATCTGCCAACAATTTACCCGAGAAATATTTGACATGTACCAGAATTATTCGTGCTATAAACACTGGCAATTTG  1990

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 1991  AACTTCTGAATTATACACCAGCAGATTATGGTGGACTACATCATGCAGCCGCCCGAATTTCCGGTGACGGTGTC  2064

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2065  TATAAGCATTTGAAGTATGAGGGTGGGATTCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGAT  2138

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2139  GCAGCGCATTCACACAGGAACGATGTCGGTTATTGTCCTTCCTCAGCCAGATGAGGTGGATGTGAAATTGGACC  2212

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2213  CCAAGGATTTGCGAATAGATACATTTCGAGCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGATAGTGCC  2286

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2287  GTCAGACTTGTCCACATCCCCACAGGCATAATCTCGGCTGACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTC  2360

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2361  TCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACATGCCACCACGCCTGGCTAATTTTTTGTATTTTTA  2434

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2435  GAGATGGGGTTTCACTGTGTTATCCAGTATGGTCGTGATCTCCTGACCTTGTGATCCACCCGCCTTGCCTTCCC  2508

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2509  AAAATCCTCGGATTACAGGTGTGAGCCACTGCGCCCAGCCATTATAAAGGGCTAGTAGTAGAATGCCAACAAGA  2582

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2583  AAGATCACAGATAAAAAATAAAGAAATAGCCTTTCGTGTGTTGAGAGCTAGACTCTACCAGCAGATTATTGAGA  2656

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2657  AAGACAAGCGTCAGCAACAAAGTGCTAGAAAACTGCAGGTGGGAACAAGAGCCCAGTCAGAGCGAATTCGGACA  2730

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2731  TATAATTTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGTTCGTGATATTAAGGAATTTTTATG  2804

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2805  TGGTGGGAAGGGCCTGGATCAGCTAATTCAGAGACTGCTTCAATCAGCAGATGAAGAAGCCATTGCTGAACTTT  2878

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2879  TGGATGAACACCTTAAATCAGCAAAATAAATACTAACTTATTATTATTTATGATTATATAAATGAAATGGACCT  2952

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 2953  ATATCAAGAGGCAGACTGAAGCTTGGAAATCATTATGAATATTTGTAAATTACAGCTTTAAGAACACATTACAC  3026

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3027  ATAAATATATGTTTTGTAATTAATCGAAGTCACATTTCCTGACCTAAGAATTTATTTTAGGTTTCCTGTAAAGT  3100

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3101  ACAATCCAACTCATCAAGTAGAAAATAAGCATGCATCATTGAAAAGAGAAAGTATTGAGAATTGATTGTGTCAT  3174

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3175  TTAGGACAAGTCACTTGTTCTCTTTATATGCCTTTTTTCCCCAGCCATCTATGAATTAATTTAAATATATTTTT  3248

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3249  AATCTACTACTTCAGGAAAATATGGTAAAATTTAGTAAAATATGAATTTTAGACTTCCTTATAAACCTTTTATT  3322

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3323  TAAATACAAAGTACCTTGGCCTATAGTGGATGCTTATGCCTGTAATCCCAGTGCTTTGAAGGGCCAAAGGGGGA  3396

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3397  AGATCTCTTGAGGTAAGAATTTGAGACCAGCCTGGGCAAAATAGACCCCATGTCTACAAAAAAACTCAAAACAT  3470

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3471  AAAGAAAAACCATAATACTGTTAATCATGTTAAAGTTAAGACTTAGACTGCAACTTTTAAATAAAAATTATGAA  3544

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3545  GAATATGAGTCATTCAATAACAATGAGCATCTGGGTACAGACAGTAAAGCCCTTTGATTGCTGTATGAATTCCA  3618

Query  454  -----------------------------------  453
                                               
Sbjct 3619  CACTATATAAACAATAAGCTGATATTTTAAATAGA  3653

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