Nucleotide Global Alignment
Description
- Query:
- TRCN0000480237
- Subject:
- XR_002957484.1
- Aligned Length:
- 3661
- Identities:
- 437
- Gaps:
- 3216
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTGTATTCTTCTTTTTCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGTACTCACAGTTCTTTCCTGATCTTCCCCGCCGCCTCCTGTATTGCCTCTTTATGGAATCACTCCATATACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGTTACACAGCATGGTTTGCCCGTGCTGCTGCCCCGCGGGCTGTCGCTTCTGACCTGCCTACACTCAGAACTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCCAAAGCATCAGAGTAATACTGTTACTGTGATGGGTAATGGAGAAGTCGTGCTGTTCTCAGGTCGTGTTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGTCGCCCACGCTGGTTGCAGTGGTGCGATCTCAGTTCACTGCAACCTTCGCCTCCCAGGTTCAAGCGATTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCTGCCTCAGCTTCCCGAGCAGCTAGGACTACAGGATCTCAGCTAAACGGGAAGCATTTTTGAAAAGTGATTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACAATTGAGAGTGAAAATTACTGAGTCCTGAACAGGCAACTTACATTCTAATACCAGCTCTGTCTCCATCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGACTGAATAGTCGTGATTAAGTTACTTGACTTCCTTGGATATCTAGATCCTTAAAGTTAAAGAATTATACAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATAATAATATTTTCTTCAAACTTTAGAAAATGACTTTATGAACCGCCTTAAGTTTGTATGTTTTCATAGCTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAAGAGCTTGTTTACACACTCAATTCTAGATTCTAGATACTTTCTAGAAAATAACTGACTTAACTCATTCAATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATATATTTGTTAGTTGTACTCCTACTCATATGCTTCAGTTAATTATATATGTTGAACAGGTAGGAAGCAGTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTTTTTATTTATTTTAATATGTTATTCATACATTTGAAGAATTATGTTCTTTCTGTAGGCAGCTGAATTTTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTTTTTGAGACGAAGTCTTGGTATTGTCCCCCTTGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTGCCTCCTGGGTTCAGGCAATTCTCCTGCCTCAGACTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACCAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCGGATAATTTTTGTATTTTTAGTAGAGACAGTGTTTCACTATGTTGGCTGGGCTGGTCTCGAACTCCTGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAGGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACTGGCGTGAGCCACTGCTGCCAGCCGGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGAATTTTAAGACTGTGGAGCTGGCTGAGGCAGTAGATGAAACAAGATTTCTTGATGTTCCTTCCAGGTTTAT 1258
Query 1 -----------------------------------------------------------------ATGAATCGT 9
|||||||||
Sbjct 1259 TATGCATGTATCTTTAGAGATGATTTTTTTTTAAAGACTGTGTTTATTGTATTTCAGATGCTGAGATGAATCGT 1332
Query 10 CACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCA 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCA 1406
Query 84 TCAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGT 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGT 1480
Query 158 TAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAA 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAA 1554
Query 232 TATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAA 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAA 1628
Query 306 CCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTG 1702
Query 380 AACAAGCAATTGAAGAATTAGAATCAATGTGTAAAA--------AGACA----------GAGT--------CTT 427
|||||||||||||||||||||||||||||||||||| |.||| .||| |||
Sbjct 1703 AACAAGCAATTGAAGAATTAGAATCAATGTGTAAAAGCCTAAATAAACAAGATGAAAAGCAGTTACAAGAACTT 1776
Query 428 GCTCTGTGGCCCAGGCTGGAATGCAG------------------------------------------------ 453
||.|| ||..|.||.|||.
Sbjct 1777 GCACT--------GGAAGAAAGGCAAACCATTGATCAAAAAATCAACATGTTGTACAATGAGCTTTTCCAGAGC 1842
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1843 CTTGTGCCAAAGGAGAAATATGACAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGA 1916
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1917 CATCTGCCAACAATTTACCCGAGAAATATTTGACATGTACCAGAATTATTCGTGCTATAAACACTGGCAATTTG 1990
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1991 AACTTCTGAATTATACACCAGCAGATTATGGTGGACTACATCATGCAGCCGCCCGAATTTCCGGTGACGGTGTC 2064
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2065 TATAAGCATTTGAAGTATGAGGGTGGGATTCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGAT 2138
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2139 GCAGCGCATTCACACAGGAACGATGTCGGTTATTGTCCTTCCTCAGCCAGATGAGGTGGATGTGAAATTGGACC 2212
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2213 CCAAGGATTTGCGAATAGATACATTTCGAGCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGATAGTGCC 2286
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2287 GTCAGACTTGTCCACATCCCCACAGGCATAATCTCGGCTGACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTC 2360
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2361 TCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACATGCCACCACGCCTGGCTAATTTTTTGTATTTTTA 2434
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2435 GAGATGGGGTTTCACTGTGTTATCCAGTATGGTCGTGATCTCCTGACCTTGTGATCCACCCGCCTTGCCTTCCC 2508
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2509 AAAATCCTCGGATTACAGGTGTGAGCCACTGCGCCCAGCCATTATAAAGGGCTAGTAGTAGAATGCCAACAAGA 2582
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2583 AAGATCACAGATAAAAAATAAAGAAATAGCCTTTCGTGTGTTGAGAGCTAGACTCTACCAGCAGATTATTGAGA 2656
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2657 AAGACAAGCGTCAGCAACAAAGTGCTAGAAAACTGCAGGTGGGAACAAGAGCCCAGTCAGAGCGAATTCGGACA 2730
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2731 TATAATTTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGTTCGTGATATTAAGGAATTTTTATG 2804
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2805 TGGTGGGAAGGGCCTGGATCAGCTAATTCAGAGACTGCTTCAATCAGCAGATGAAGAAGCCATTGCTGAACTTT 2878
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2879 TGGATGAACACCTTAAATCAGCAAAATAAATACTAACTTATTATTATTTATGATTATATAAATGAAATGGACCT 2952
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2953 ATATCAAGAGGCAGACTGAAGCTTGGAAATCATTATGAATATTTGTAAATTACAGCTTTAAGAACACATTACAC 3026
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3027 ATAAATATATGTTTTGTAATTAATCGAAGTCACATTTCCTGACCTAAGAATTTATTTTAGGTTTCCTGTAAAGT 3100
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3101 ACAATCCAACTCATCAAGTAGAAAATAAGCATGCATCATTGAAAAGAGAAAGTATTGAGAATTGATTGTGTCAT 3174
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3175 TTAGGACAAGTCACTTGTTCTCTTTATATGCCTTTTTTCCCCAGCCATCTATGAATTAATTTAAATATATTTTT 3248
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3249 AATCTACTACTTCAGGAAAATATGGTAAAATTTAGTAAAATATGAATTTTAGACTTCCTTATAAACCTTTTATT 3322
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3323 TAAATACAAAGTACCTTGGCCTATAGTGGATGCTTATGCCTGTAATCCCAGTGCTTTGAAGGGCCAAAGGGGGA 3396
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3397 AGATCTCTTGAGGTAAGAATTTGAGACCAGCCTGGGCAAAATAGACCCCATGTCTACAAAAAAACTCAAAACAT 3470
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3471 AAAGAAAAACCATAATACTGTTAATCATGTTAAAGTTAAGACTTAGACTGCAACTTTTAAATAAAAATTATGAA 3544
Query 454 -------------------------------------------------------------------------- 453
Sbjct 3545 GAATATGAGTCATTCAATAACAATGAGCATCTGGGTACAGACAGTAAAGCCCTTTGATTGCTGTATGAATTCCA 3618
Query 454 ----------------------------------- 453
Sbjct 3619 CACTATATAAACAATAAGCTGATATTTTAAATAGA 3653
