Nucleotide Global Alignment

Description

Query:
TRCN0000481038
Subject:
NM_001256006.1
Aligned Length:
1557
Identities:
515
Gaps:
999

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTGCTCCTTTTTCTCTATATTAATAAGAAGTTCTGTTTTGAAAATGTTGGCGGGTTTCCAGATCTTGGTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAATACAGTACAAGGAAGAATTCACAAGATAAAATTTATAATTCCTACATGGACAAAGATGAGCATGGTTCAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACAGTCCTCTATCGGCAGAGTATGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAATGAGAAGAACACCCCCGCTGGATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTTGTTCTTCTACCTATAAAGAAAC  814

Query    1  ------------------------------------------------------------------ATGTTGGA  8
                                                                              ||||||.|
Sbjct  815  AGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAACATTTAAATTTAATCATGTTGAA  888

Query    9  ---GGGCT------------TCCAGATCTTGGTTCAGA----ATACAGTACA----AGGAACAA----------  49
               |.|.|            |.|||.||  ||||.|||    ||...|||||    |.|||.||          
Sbjct  889  TCTGAGATGATTGGAAATTATGCAGTTC--GGTTTAGACTGTATGGTGTACATCGCATGAAAAAAGAAAAGATT  960

Query   50  ---------------------TTCACAAGAT--------------AAAATG-----------------------  65
                                 ||.||||.||              ||||||                       
Sbjct  961  GTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGTCATTGCCTGTGATATTGGAACC  1034

Query   66  ---------------TGTCTGTGACTCCCAAATGAGTGTGTCAGAAATGTCTTGTAGTGAAAGTACATCCGCAT  124
                           ||.||||||||||||||||||.||||||||||||||.||||||||||||||||||.|||
Sbjct 1035  TTCTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCAT  1108

Query  125  GTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCTTTATAATGCCACAAATGGGAGACTA  198
            ||||||||||.|||.|.||.|||||||||||||||||.|||.|||||||||||||||||||||.|||.||||||
Sbjct 1109  GTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTA  1182

Query  199  TCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACAGACCACCCAATACATATGTTAAGTT  272
            |||||||||||||||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1183  TCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGACCACCCAATACATATGTTAAGTT  1256

Query  273  AACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCATCCGCAGAGGGCGGCCAAATCCAG  346
            ||||||||.|||.||||.||.|||||||||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 1257  AACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCGCAGAGGGCAGCCAAATCCAG  1330

Query  347  TATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATGTGACACTCATGCTGTCTGTGTA  419
            ||||.|||||||||||||| |||| |||||.|||||||||||||||||.|||||||||||||.|||||||||||
Sbjct 1331  TATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATGTGACACTCATACTGTCTGTGTA  1403

Query  420  TAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGGTCTCAACAGCTCTGG---AGAAG  487
            |||||||.|||||||||.|||||   ||||||||||||||||||.|||||||||||||||||||||   |||||
Sbjct 1404  TAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTCTGGAGAAGAAG  1477

Query  488  AACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAGATGGCAGGCGTTGCTAGAGTCA  561
            |||||||||||||||||||||||||||||||||||||||.|||||||.||||||||||.|||||||||||||||
Sbjct 1478  AACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGATGGCATGCGTTGCTAGAGTCA  1551

Query  562  CGA  564
               
Sbjct 1552  ---  1551