Nucleotide Global Alignment
Description
- Query:
- TRCN0000481364
- Subject:
- XR_382742.3
- Aligned Length:
- 3353
- Identities:
- 286
- Gaps:
- 3031
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCTTCTCTTGAAGACGCGAGGAGGGGGCGGGTCGAGCGGAGCCTTCCCAGCGGTGGGAGGAGCCTGAGTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGAAGCCACGTGTCCACCAGCGCGCAGGCGCAGGATTGGTCACTCCCCCGGGAGTGAGGGCTGCCGGGGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGACGTGGCCCGGTAACGTTCCTGCCCGTACGGCCTCCGGGGAACGGCGCTGCCGGAACAGCCCGCGGCCTAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCGCCCAGCGTGCGTGTGCCTGCTTGCCGAGCCCGGGCTAGCGGCGGAGACTGCCGAGCTTGCGAGGACGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGACATGGGGGAGTGACGCGCCTGCGCCCGCGCTTCCGCAGCGGCGGCGAGCCATGAGGAGAGCCCGCGGCG 370
Query 1 -----------------------ATGGAGGAGAAATACGGCGGGGACGTGCTGGCCGGCCCCGGCGGCGGCGGC 51
|||||||||||.|||||||||||||.||.|.||||.|| ||||||.
Sbjct 371 CGGGCAGCGGCTCCTGAGCCTGCATGGAGGAGAAGTACGGCGGGGACGCGCGGCCCGGGCC------CGGCGGT 438
Query 52 GGCCTTGGGCCGGTGGACGTACCCAGCGCTCGATTAACAAAATATATTGTGTTACTATGTTTCACTAAATTTTT 125
|||||.||||||||||||||.||||||||.||||||||||.|||.|||.|.||.||.|||||.||.||||.|||
Sbjct 439 GGCCTCGGGCCGGTGGACGTGCCCAGCGCCCGATTAACAAGATACATTTTATTGCTGTGTTTAACCAAATGTTT 512
Query 126 GAAGGCTGTGGGACTTTTCGAATCATATGATCTCCTAAAAGCTGTTCACATTGTTCAGTTCATTTTTATATTAA 199
||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 513 GAAGGCTGTGGGACTTTTTGAATCATATGATCTCCTAAAAGCTGTTCACATTGTTCAATTTATTTTTATATTAA 586
Query 200 AACTTGGGACTGCATTTTTTATGGTTTTGTTTCAAAAGCCATTTTCTTCTGGGAAAACTATTACCAAACACCAG 273
|||||||||||||||||||||||||||||||||||||.||.|||||||||||||||.|||||||.||.||.|||
Sbjct 587 AACTTGGGACTGCATTTTTTATGGTTTTGTTTCAAAAACCGTTTTCTTCTGGGAAACCTATTACAAAGCATCAG 660
Query 274 ATAATTGGATCACTAAAAATTCCTGGTAGAAAAGAATTTAAAGACAAAAAGT---TAAATG-ATCCTA------ 337
|||||| ||||| |||||| |||...||| |..||| |||.||
Sbjct 661 -----TGGATC----AAAAT---------------ATTTAA--ACATGCAGTTGCTGGATGTATCATATCACTT 708
Query 338 ---------------------------GGA-AACTA--------------GTGGGAA-AC-------------- 354
||| .|||| ||..||| ||
Sbjct 709 TTATGGTTTTTTGGCCTTACTCTTTGTGGACCACTAAGGACCTTGCTGCTGTTTGAACACAGTGACATTGTCGT 782
Query 355 -------------------------------------------------------------------------- 354
Sbjct 783 AATCTCTCTGCTCAGTGTTCTGTTCACTAGCTCTGGAGGAGGACCAGCAAAGACAAGAGGGGCTGCTTTTTTCA 856
Query 355 -------------------------------------------------------------------------- 354
Sbjct 857 TTATTGCTGTGATCTGCTTACTGCTTTTCGACAATGATGATCTCATGGCAAAGATGGCTGAACACCCGGAAGGA 930
Query 355 -------------------------------------------------------------------------- 354
Sbjct 931 CATCATGATAGTGCTCTAACTCACATGCTCTATACAGCCATTGCCTTTTTAGGGGTGGCAGATCACAAGGGTGG 1004
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1005 AGTACTCTTGCTGGTGCTGGCTTTATGTTGTAAAGTTGGTTTTCATACGGCTTCCAGAAAGCTCTCTATAGATG 1078
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1079 TTGGTGGAGCTAAGCGCCTTCAGGCCTTATCTCAGCTTGTTTCTGTGTTTCTCCTGTGCCCATGGGTGATTGTT 1152
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1153 CTTTCTGTGACGACTGAGAGTAAGGTTGAGTCTTGGTTCTCTCTCATCATGCCTTTCACCACAGTCATCTTTTT 1226
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1227 TGTCATGATCCTGGATTTCTATATGGATTCTGTTTGTTCAGTCAAAATGGACGTGTCCAAATGTGCCCGCTATG 1300
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1301 GGTCCTTTCCCATTTTTATTAGTGCCCTCCTGTTTGGAAATTTCTGGACACACCCAATAACAGACCAACTCCGG 1374
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1375 GCTATGAACAGAGCAGCACACCAGGAGAGCACAGAGCACGTCCTGTCTGGAGGAGTGGTAGTGAGCGCTGTGTT 1448
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1449 CTTCATTTTGTCGGCCAACATTCTATCATCTCCCTCTAAGAGAGGACAGAAAGGTACCCTTATTGGATATTCTC 1522
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1523 CTGAAGGAACACCACTCTATCACTTCATGGGGGACGCTTTTCAGCACAGCTCTCAGTCGGTGCCTAGGTTCATT 1596
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1597 AAGGACTCACTAAAGCAGGTTCTCGAGGAGAGCGACTCTAGGCAGATCTTTTACTTCTTGTGCTTGAATCTGCT 1670
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1671 TTTTACCTTTGTGGAGTTGTTCTATGGCGTGCTAACCAACAGTCTAGGCCTGATCTCAGATGGATTTCACATGC 1744
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1745 TCTTTGACTGCTCGGCTTTGGTCATGGGACTGTTTGCTGCCCTGATGAGCCGCTGGAAAGCCACCCGGATTTTC 1818
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1819 TCCTATGGGTATGGCCGAATAGAGATTCTCTCTGGCTTTATTAATGGGCTTTTTCTGATCGTGATAGCATTTTT 1892
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1893 TGTGTTTATGGAATCAGTGGCTAGACTGATCGATCCTCCGGAACTAGACACAAACATGCTGACATTTCCGTCGG 1966
Query 355 -------------------------------------------------------------------------- 354
Sbjct 1967 AGGGCTGATAGTAAACCTTATTGGTATCTGTGCCTTCAGCCACGCCCACAGCCATGGCCATGGCGCTTCTCAAG 2040
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2041 GAAACTGCCACTCTGATCACGGCCATTCACACCATGCACATGGACACGGCCATGATCACGGTCACAGCCACGGC 2114
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2115 TTCACGGGTGGAGGCATGAATGCGAACATGAGGGGTGTATTTCTCCATGTGTTGGCAGACACACTGGGCAGCAT 2188
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2189 CGGCGTGATTGTGTCCACAGTTCTCATAGAGCAGTTTGGATGGTTCATTGCTGATCCCCTGTGTTCTCTTTTTA 2262
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2263 TTGCCGTGTTGATATTTCTCAGTGTGATCCCACTGATTAAAGATGCCTGTCAAGTTCTACTTCTGAGACTACCA 2336
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2337 CCTGACCATGAAAAAGAACTGCATATTGCTTTAGAAAAGATACAGAAAATTGAGGGATTAATATCATACCGAGA 2410
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2411 CCCTCATTTTTGGCGCCATTCTGCCAGTATTGTAGCGGGAACAATTCATATACAAGTGACATCTGAGGTGCTGG 2484
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2485 AGCAGAGAATTGTACAGCAGGTTACAGGGATACTTAAAGATGCAGGAGTAAACAACCTAACCATACAAGTGGAA 2558
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2559 AAGGAGGCATACTTTCAGCATATGTCCGGCCTGAGTACTGGATTTCATGATGTTCTGGCTATGACGAAGCAGAT 2632
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2633 GGAATCCCTGAAATACTGCAAAGATGGCACTTACATCATGTGAGACGCAGCCCTGCGGCATGAACAGTGAACAG 2706
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2707 CGGAGGTCGGATGAGGTGATAATGTCAGAGCAGAGTGAAAGTTGCACATAATTGTACGAAAACTTTTTAAGCTC 2780
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2781 CCTACTGTTAGATTAAGGAGTCTGTTTTAAAAGAAAATTGAGATGCAGAATGAAGCATTCATTGAATAAGAAAA 2854
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2855 TTGTCGCTCTGTTTGAATTATGTGCTTGAAAGGAATCTTGCATTGGAATGAACATGATGTAACCGTACACATCA 2928
Query 355 -------------------------------------------------------------------------- 354
Sbjct 2929 TCTTCAGGAATGGACGCATAATGATGGATTCTGGTGAAGACCAAAATTTCTTCTGTGCATTTACTCTCAGTCAG 3002
Query 355 -------------------------------------------------------------------------- 354
Sbjct 3003 GAAGCATCCCCACTGTAAATATGTATTTACATGTTTATTACAAAGACTCAGATGAAGTTTTTAGTCGATTTTTT 3076
Query 355 -------------------------------------------------------------------------- 354
Sbjct 3077 GCATATCTGAAGGACAAAATGAGAATAAAATTCTATATTTATGAATTTTCTGTATATAAAACTAATTTCTAATT 3150
Query 355 -------------------------------------------------------------------------- 354
Sbjct 3151 ATAACTTAAGTCTTTAAGTACAAGCTGTATATCTACTTGAAATGTAAACTATTCAGGAGAAATTACAACCACTG 3224
Query 355 -------------------------------------------------------------------------- 354
Sbjct 3225 ATTTGAGATAAAGAGAATAGAGAACTATGATATAGTTCTTGGTGTATTTCAAGATTTAACCACTCCATTAAATA 3298
Query 355 ----------------------- 354
Sbjct 3299 AATTTTTTTTATTTTTGGTAGTA 3321
