Nucleotide Global Alignment

Description

• Query: TRCN0000488050
• Subject: NM_001201404.3
• Aligned Length: 1495
• Identities: 835
• Gaps: 653

Alignment

Query    1  ATGCCGTTAGTAACGAGGAACATCGAGCCAAGGCACCTGTGCCGTCAGACGTTGCCTAGCGTTAGAAGCGAGCT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCCGTTAGTAACGAGGAACATCGAGCCAAGGCACCTGTGCCGTCAGACGTTGCCTAGCGTTAGAAGCGAGCT  74

Query   75  GGAATGCGTGACCAACATCACCCTGGCAAATGTCATCCGACAGCTGGGCAGCCTGAGTAAATATGCAGAGGACA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGAATGCGTGACCAACATCACCCTGGCAAATGTCATCCGACAGCTGGGCAGCCTGAGTAAATATGCAGAGGACA  148

Query  149  TTTTTGGAGAGCTCTTTACTCAGGCAAATACCTTTGCCTCTCGGGTAAGCTCCCTTGCTGAGAGGGTCGACCGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTTTTGGAGAGCTCTTTACTCAGGCAAATACCTTTGCCTCTCGGGTAAGCTCCCTTGCTGAGAGGGTCGACCGA  222

Query  223  CTACAGGTTAAAGTCACTCAGCTGGATCCCAAGGAAGAAGAAGTGTCACTGCAAGGAATCAACACCCGAAAAGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTACAGGTTAAAGTCACTCAGCTGGATCCCAAGGAAGAAGAAGTGTCACTGCAAGGAATCAACACCCGAAAAGC  296

Query  297  CTTCAGAAGTTCCACCATTCAAGACCAGAAGCTTTTTGACAGAAACTCTCTCCCAGTGCCTGTCTTAGAAACAT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTTCAGAAGTTCCACCATTCAAGACCAGAAGCTTTTTGACAGAAACTCTCTCCCAGTGCCTGTCTTAGAAACAT  370

Query  371  ACAATACCTGTGATACTCCTCCCCCTCTCAACAATCTTACCCCTTACAGGGACGATGGAAAAGAGGCACTCAAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACAATACCTGTGATACTCCTCCCCCTCTCAACAATCTTACCCCTTACAGGGACGATGGAAAAGAGGCACTCAAA  444

Query  445  TTCTACACAGACCCTTCATACTTCTTTGATCTTTGGAAGGAGAAGATGCTGCAGGACACCAAGGATATCATGAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTCTACACAGACCCTTCATACTTCTTTGATCTTTGGAAGGAGAAGATGCTGCAGGACACCAAGGATATCATGAA  518

Query  519  AGAGAAGAGAAAGCATAGGAAAGAAAAGAAAGATAATCCAAATCGAGGGAATGTAAACCCACGTAAAATCAAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGAGAAGAGAAAGCATAGGAAAGAAAAGAAAGATAATCCAAATCGAGGGAATGTAAACCCACGTAAAATCAAGA  592

Query  593  CACGTAAGGAAGAGTGGGAGAAAATGAAGATGGGGCAAGAATTTGTGGAGTCCAAAGAAAAGCTGGGGACTTCT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CACGTAAGGAAGAGTGGGAGAAAATGAAGATGGGGCAAGAATTTGTGGAGTCCAAAGAAAAGCTGGGGACTTCT  666

Query  667  GGGTATCCACCCACTTTGGTGTACCAGAATGGCAGCATTGGCTGTGTTGAAAACGTGGATGCAAGTAGCTATCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGGTATCCACCCACTTTGGTGTACCAGAATGGCAGCATTGGCTGTGTTGAAAACGTGGATGCAAGTAGCTATCC  740

Query  741  GCCACCACCACAGTCAGACTCTGCTTCTTCACCTTCTCCTTCCTTCTCCGAGGACAACTTGCCTCCTCCACCAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCCACCACCACAGTCAGACTCTGCTTCTTCACCTTCTCCTTCCTTCTCCGAGGACAACTTGCCTCCTCCACCAG  814

Query  815  CAGAATTCAGTTACCCAG-TGGACAACCAAAGAGGATCTGGTTTGGCTGGACCCAAAAGATCCAGTGTGGTCAG  887
            ||||||||||.|...||| ||..|        |||.|                                     
Sbjct  815  CAGAATTCAGGTTTTCAGCTGCGC--------AGGGT-------------------------------------  843

Query  888  CCCAAGCCATCCACCACCAGCTCCTCCTCTAGGCTCTCCACCAGGCCCTAAACCCGGGTTTGCTCCACCACCTG  961
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query  962  CCCCTCCGCCACCTCCGCCTCCAATGATAGGCATCCCACCTCCACCACCGCCTGTAGGATTTGGGTCTCCAGGG  1035
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1036  ACGCCTCCACCACCCTCACCCCCATCTTTCCCACCTCACCCTGATTTTGCTGCCCCTCCACCTCCTCCTCCACC  1109
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1110  ACCAGCAGCTGACTACCCAACTCTGCCACCACCTCCCTTGTCCCAGCCAACAGGAGGAGCACCTCCTCCTCCCC  1183
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1184  CTCCTCCTCCTCCTCCGGGGCCCCCTCCTCCCCCTTTCACTGGTGCAGATGGCCAACCTGCTATACCACCACCG  1257
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1258  CTTTCTGATACCACCAAGCCCAAGTCCTCCTTGCCTGCCGTGAGCGATGCCCGTAGCGACCTGCTTTCAGCCAT  1331
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1332  CCGTCAAGGTTTTCAGCTGCGCAGGGTTGAGGAGCAGCGGGAACAAGAGAAGCGGGATGTTGTGGGCAATGACG  1405
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1406  TGGCCACCATCTTGTCTCGTCGCATTGCTGTTGAGTACAGTGACTCAGAAGATGACTCCTCTGAATTTGATGAG  1479
                                                                                      
Sbjct  844  --------------------------------------------------------------------------  843

Query 1480  GACGACTGGTCCGAT  1494
                           
Sbjct  844  ---------------  843