Nucleotide Global Alignment
Description
- Query:
- TRCN0000488055
- Subject:
- NR_110578.2
- Aligned Length:
- 3801
- Identities:
- 1015
- Gaps:
- 2785
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTGGAGCGCCGCGGCCCCGCCCCGCCGGGTTGCTAGGGGAAGTGACGTCACAGCGCGATGGCGGCGGCTCCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGGCGGGGAGAGGGCAAGCGGGACCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGTATTGAGGCGCTGGGAGCGGCGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGGAGCCGGACCCGCAGTAGCGGCAGC 296
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 297 AGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAGGAGCGAATCGGGCCGCCGCCGCCA 370
Query 2 TGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGCGGCTCCTTCGGAGACATCTATCTC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGCGGCTCCTTCGGAGACATCTATCTC 444
Query 76 GGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGTCAAAACCAAACACCCTCAGCTCCA 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGTCAAAACCAAACACCCTCAGCTCCA 518
Query 150 CATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCACCATCAGATGGTGCGGGGCAGAGG 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCACCATCAGATGGTGCGGGGCAGAGG 592
Query 224 GGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGACCTCTTCAACTTCTGCTCCAGGAAA 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGACCTCTTCAACTTCTGCTCCAGGAAA 666
Query 298 TTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCATCGAATACATTCATTCAAAGAACTT 371
|||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAA------------------------------------- 703
Query 372 CATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGAAGGGCAACCTGGTGTACATCATCG 445
Sbjct 704 -------------------------------------------------------------------------- 703
Query 446 ACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATCCCCTATCGTGAGAACAAGAACCTC 519
Sbjct 704 -------------------------------------------------------------------------- 703
Query 520 ACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACAATCCCGAAGAGATGACTTGGAGTC 593
||||||||||||||||||||||||||||||
Sbjct 704 --------------------------------------------TGAACAATCCCGAAGAGATGACTTGGAGTC 733
Query 594 TCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCTGCCACCAAGAGAC 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 734 TCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCTGCCACCAAGAGAC 807
Query 668 AGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTGTTGTGTAAAGGCTACCCTTCCGAA 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 AGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTGTTGTGTAAAGGCTACCCTTCCGAA 881
Query 742 TTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCCTGACTACTCGTACCTGCGGCAGCT 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 882 TTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCCTGACTACTCGTACCTGCGGCAGCT 955
Query 816 TTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCGACTGGAACATGCTCAAATTTGGTG 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 TTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCGACTGGAACATGCTCAAATTTGGTG 1029
Query 890 CCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCGCGGAACCCG 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030 CCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCGCGGAACCCG 1103
Query 964 GCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCCCACACCCCT 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1104 GCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCCCACACCCCT 1177
Query 1038 CACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCTGTCTCCGGCATGGAGAGAGAGCGGAAAGTGAGTA 1111
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1178 CACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCATGGAGAGAGAGCGGAAAGTGAGTA 1251
Query 1112 TGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATG 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 TGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATG 1325
Query 1186 TCCACCTCACA--------------------------------------------------------------- 1196
|||||||||||
Sbjct 1326 TCCACCTCACAGAATAGCATTCCTTTCGAACACCACGGCAAGTAGCTGCTCGTCTCCCATCGGAAGGCAGCACT 1399
Query 1197 -GATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGA------------------------ 1245
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1400 GGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTATTGCTGTGA 1473
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1474 AGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGACACGTCCCCCGGTCTAGGATC 1547
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1548 GAAATGTTAACACCGGGAGCTCTCCAGGCCACTCACCCAGCGACGCTCGTGGGGGAAACATACTAAACGGACAG 1621
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1622 ACTCCAAGAGCTGCCACCGCTGGGGCTGCACTGCGGCCCCCCACGTGAACTCGGTTGTAACGGGGCTGGGAAGA 1695
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1696 AAAGCAGAGAGAGAATTGCAGAGAATCAGACTCCTTTTCCAGGGCCTCAGCTCCCTCCAGTGGTGGCCGCCCTG 1769
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1770 TACTCCCTGACGATTCCACTGTAACTACCAATCTTCTACTTGGTTAAGACAGTTTTGTATCATTTTGCTAAAAA 1843
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1844 TTATTGGCTTAAATCTGTGTAAAGAAAATCTGTCTTTTTATTGTTTCTTGTCTGTTTTTGCAGTCTTACAAAAA 1917
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1918 AAATGTTGACTAAGGAATTCTGAGACAGGCTGGCTTGGAGTTAGTGTATGAGGTGGAGTCGGGCAGGGAGAAGG 1991
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1992 TGCAGGTGGATCTCAAGGGTGTGTGCTGTGTTTGTTTTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTC 2065
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2066 TCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACC 2139
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2140 CTCCCTCCTCCCGTAATTGACATGCCTGCTGTCAGGAACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAG 2213
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2214 GCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAGGCAAAGCACTGCGCGCTTCTTCCCCAGGAGGTGGGCAG 2287
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2288 GCAGCTGAGAGCTTGGAAGCAGAGGCTTTGAGACCCTAGCAGGACAATTGGGAGTCCCAGGATTCAAGGTGGAA 2361
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2362 GATGCGTTTCTGGTCCCTTGGGAGAGGACTGTGAACCGAGAGGTGGTTACTGTAGTGTTTGTTGCCTTGCTGCC 2435
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2436 TTTGCACTCAGTCCATTTTCTCAGCACTCAATGCTCCTGTGCGGATTGGCACTCCGTCTGTATGAATGCCTGTG 2509
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2510 CTTAAAACCAGGAGCGGGGCTGTCCTTGCCACGTGCCAAGACTAGCTCAGAAAAGCCGGCAGGCCAGAAGGACC 2583
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2584 CACCCTGAGGTGCCAAGGAGCAGGTGACTCTCCCAACCGGACCCAGAACCTTCACGGCCAGAAAGTAGAGTCTG 2657
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2658 CGCTGTGACCTTCTGTTGGGCGCGTGTCTGTTGGTCAGAAGTGAAGCAGCGTGCGTGGGGCCGAGTCCCACCAG 2731
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2732 AAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCT 2805
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2806 TCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGT 2879
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2880 CTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGG 2953
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2954 TGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAACTGGCTGGCGTCCCAGAACACAG 3027
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3028 TTGTTCACCCCCCCACCAGCTGGCTGGCCGTCTGCCTGAGCCCATGGATGCTTTCTCAATCCTAGGCTGGTTAC 3101
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3102 TGTGTAAGCGTTTTGGAGTACGGGGCCTTGAGCGGGTGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGT 3175
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3176 GGGTCAGAGCCGAGTTAAGAGATTTTCTTTGTTGCTGGACCCCTTCTTGAAGGTAGACGTCCCCCACCCGGAGA 3249
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3250 GACGTCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGCTTTGTAAATATCTGTGGTCCCGATGTAGTGCCCAGAAC 3323
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3324 GTTTGTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCCCGAGCCTCGCCGGGTCGCGTCTTCGGAGTGCTTGTGAC 3397
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3398 AGTCCTTGCCCAGTATCTAGTCCCCGTCGCCCCGTGCAGGAGACGTAGGTAGGACGTCGTGTCAGCTGTGCACT 3471
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3472 GACGGCCAGTCTCCGAGCTGTGCGTTTGTATCGCCACTGTATTTGTGTACTTTAACAATCGTGTAAATAATAAA 3545
Query 1246 --------------------------- 1245
Sbjct 3546 TTCATAATGACTTCTACCTTTCTTCCC 3572
