Nucleotide Global Alignment

Description

Query:
TRCN0000488055
Subject:
NR_110578.2
Aligned Length:
3801
Identities:
1015
Gaps:
2785

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTGGAGCGCCGCGGCCCCGCCCCGCCGGGTTGCTAGGGGAAGTGACGTCACAGCGCGATGGCGGCGGCTCCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGGCGGGGAGAGGGCAAGCGGGACCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGTATTGAGGCGCTGGGAGCGGCGGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGGAGCCGGACCCGCAGTAGCGGCAGC  296

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct  297  AGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAGGAGCGAATCGGGCCGCCGCCGCCA  370

Query    2  TGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGCGGCTCCTTCGGAGACATCTATCTC  75
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGCGGCTCCTTCGGAGACATCTATCTC  444

Query   76  GGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGTCAAAACCAAACACCCTCAGCTCCA  149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGTCAAAACCAAACACCCTCAGCTCCA  518

Query  150  CATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCACCATCAGATGGTGCGGGGCAGAGG  223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCACCATCAGATGGTGCGGGGCAGAGG  592

Query  224  GGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGACCTCTTCAACTTCTGCTCCAGGAAA  297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGACCTCTTCAACTTCTGCTCCAGGAAA  666

Query  298  TTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCATCGAATACATTCATTCAAAGAACTT  371
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct  667  TTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAA-------------------------------------  703

Query  372  CATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGAAGGGCAACCTGGTGTACATCATCG  445
                                                                                      
Sbjct  704  --------------------------------------------------------------------------  703

Query  446  ACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATCCCCTATCGTGAGAACAAGAACCTC  519
                                                                                      
Sbjct  704  --------------------------------------------------------------------------  703

Query  520  ACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACAATCCCGAAGAGATGACTTGGAGTC  593
                                                        ||||||||||||||||||||||||||||||
Sbjct  704  --------------------------------------------TGAACAATCCCGAAGAGATGACTTGGAGTC  733

Query  594  TCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCTGCCACCAAGAGAC  667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  734  TCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCTGCCACCAAGAGAC  807

Query  668  AGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTGTTGTGTAAAGGCTACCCTTCCGAA  741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  808  AGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTGTTGTGTAAAGGCTACCCTTCCGAA  881

Query  742  TTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCCTGACTACTCGTACCTGCGGCAGCT  815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  882  TTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCCTGACTACTCGTACCTGCGGCAGCT  955

Query  816  TTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCGACTGGAACATGCTCAAATTTGGTG  889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  956  TTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCGACTGGAACATGCTCAAATTTGGTG  1029

Query  890  CCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCGCGGAACCCG  963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030  CCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAGCGGCTGAGACACTCGCGGAACCCG  1103

Query  964  GCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCCCACACCCCT  1037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1104  GCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCAGGAAGTGGCTCCCCCCACACCCCT  1177

Query 1038  CACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCTGTCTCCGGCATGGAGAGAGAGCGGAAAGTGAGTA  1111
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1178  CACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCATGGAGAGAGAGCGGAAAGTGAGTA  1251

Query 1112  TGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATG  1185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252  TGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATG  1325

Query 1186  TCCACCTCACA---------------------------------------------------------------  1196
            |||||||||||                                                               
Sbjct 1326  TCCACCTCACAGAATAGCATTCCTTTCGAACACCACGGCAAGTAGCTGCTCGTCTCCCATCGGAAGGCAGCACT  1399

Query 1197  -GATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGA------------------------  1245
             |||||||||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 1400  GGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTATTGCTGTGA  1473

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1474  AGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGACACGTCCCCCGGTCTAGGATC  1547

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1548  GAAATGTTAACACCGGGAGCTCTCCAGGCCACTCACCCAGCGACGCTCGTGGGGGAAACATACTAAACGGACAG  1621

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1622  ACTCCAAGAGCTGCCACCGCTGGGGCTGCACTGCGGCCCCCCACGTGAACTCGGTTGTAACGGGGCTGGGAAGA  1695

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1696  AAAGCAGAGAGAGAATTGCAGAGAATCAGACTCCTTTTCCAGGGCCTCAGCTCCCTCCAGTGGTGGCCGCCCTG  1769

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1770  TACTCCCTGACGATTCCACTGTAACTACCAATCTTCTACTTGGTTAAGACAGTTTTGTATCATTTTGCTAAAAA  1843

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1844  TTATTGGCTTAAATCTGTGTAAAGAAAATCTGTCTTTTTATTGTTTCTTGTCTGTTTTTGCAGTCTTACAAAAA  1917

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1918  AAATGTTGACTAAGGAATTCTGAGACAGGCTGGCTTGGAGTTAGTGTATGAGGTGGAGTCGGGCAGGGAGAAGG  1991

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1992  TGCAGGTGGATCTCAAGGGTGTGTGCTGTGTTTGTTTTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTC  2065

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2066  TCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACC  2139

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2140  CTCCCTCCTCCCGTAATTGACATGCCTGCTGTCAGGAACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAG  2213

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2214  GCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAGGCAAAGCACTGCGCGCTTCTTCCCCAGGAGGTGGGCAG  2287

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2288  GCAGCTGAGAGCTTGGAAGCAGAGGCTTTGAGACCCTAGCAGGACAATTGGGAGTCCCAGGATTCAAGGTGGAA  2361

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2362  GATGCGTTTCTGGTCCCTTGGGAGAGGACTGTGAACCGAGAGGTGGTTACTGTAGTGTTTGTTGCCTTGCTGCC  2435

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2436  TTTGCACTCAGTCCATTTTCTCAGCACTCAATGCTCCTGTGCGGATTGGCACTCCGTCTGTATGAATGCCTGTG  2509

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2510  CTTAAAACCAGGAGCGGGGCTGTCCTTGCCACGTGCCAAGACTAGCTCAGAAAAGCCGGCAGGCCAGAAGGACC  2583

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2584  CACCCTGAGGTGCCAAGGAGCAGGTGACTCTCCCAACCGGACCCAGAACCTTCACGGCCAGAAAGTAGAGTCTG  2657

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2658  CGCTGTGACCTTCTGTTGGGCGCGTGTCTGTTGGTCAGAAGTGAAGCAGCGTGCGTGGGGCCGAGTCCCACCAG  2731

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2732  AAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCT  2805

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2806  TCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGT  2879

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2880  CTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGG  2953

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2954  TGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAACTGGCTGGCGTCCCAGAACACAG  3027

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3028  TTGTTCACCCCCCCACCAGCTGGCTGGCCGTCTGCCTGAGCCCATGGATGCTTTCTCAATCCTAGGCTGGTTAC  3101

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3102  TGTGTAAGCGTTTTGGAGTACGGGGCCTTGAGCGGGTGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGT  3175

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3176  GGGTCAGAGCCGAGTTAAGAGATTTTCTTTGTTGCTGGACCCCTTCTTGAAGGTAGACGTCCCCCACCCGGAGA  3249

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3250  GACGTCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGCTTTGTAAATATCTGTGGTCCCGATGTAGTGCCCAGAAC  3323

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3324  GTTTGTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCCCGAGCCTCGCCGGGTCGCGTCTTCGGAGTGCTTGTGAC  3397

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3398  AGTCCTTGCCCAGTATCTAGTCCCCGTCGCCCCGTGCAGGAGACGTAGGTAGGACGTCGTGTCAGCTGTGCACT  3471

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3472  GACGGCCAGTCTCCGAGCTGTGCGTTTGTATCGCCACTGTATTTGTGTACTTTAACAATCGTGTAAATAATAAA  3545

Query 1246  ---------------------------  1245
                                       
Sbjct 3546  TTCATAATGACTTCTACCTTTCTTCCC  3572

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