Nucleotide Global Alignment

Description

• Query: TRCN0000488275
• Subject: NM_001322503.1
• Aligned Length: 1425
• Identities: 1036
• Gaps: 342

Alignment

Query    1  ATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAA  74

Query   75  GGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGGTAACATCCTAGTGATCCTCT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGGTAACATCCTAGTGATCCTCT  148

Query  149  CCGTAGCCTGTCACCGACACCTGCACTCAGTCACGCACTACTACATCGTCAACCTGGCGGTGGCCGACCTCCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCGTAGCCTGTCACCGACACCTGCACTCAGTCACGCACTACTACATCGTCAACCTGGCGGTGGCCGACCTCCTG  222

Query  223  CTCACCTCCACGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGGGCCTTCGGCAGGGTCTTCTG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTCACCTCCACGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGGGCCTTCGGCAGGGTCTTCTG  296

Query  297  CAACATCTGGGCGGCAGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCTCTGCATCATCTCCATCGACC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAACATCTGGGCGGCAGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCTCTGCATCATCTCCATCGACC  370

Query  371  GCTACATCGGCGTGAGCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTCTCATGGCTCTGCTC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCTACATCGGCGTGAGCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTCTCATGGCTCTGCTC  444

Query  445  TGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGA  518

Query  519  GACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTCTACCTGCCTCTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTCTACCTGCCTCTGG  592

Query  593  CCATCATCCTGGTCATGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCATCATCCTGGTCATGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTC  666

Query  667  AAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGG  740

Query  741  GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAAGAAAGCGGCCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAAGAAAGCGGCCA  814

Query  815  AAACGCTGGGCATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCTTAGTCATGCCCATTG----G  884
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    .
Sbjct  815  AAACGCTGGGCATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCTTAGTCATGCCCATTGACGAA  888

Query  885  GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAAC--------AGTTTTTAAAATAGT------ATTTTGGCTCGG  944
            ||||                  |.|||||..||        |||       ..|||      ||.|||||||  
Sbjct  889  GTCT------------------CGCTCTGTCACCAGGCTGGAGT-------GCAGTGGCATGATCTTGGCTC--  935

Query  945  ATATCTAAACAGCTGCATCAACCCCATCATATACCCATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGAATG  1018
                       .|||||.|..||.|              ||||     .|.||||||                 
Sbjct  936  -----------ACTGCAACCTCCGC--------------CTCC-----CGGGTTCAA-----------------  962

Query 1019  TCTTGAGAATCCAGTGTCTCCGCAGAAAGCAGTCTTCCAAACATGCCCTGGG-CTACACCCTGCACCCGCCCAG  1091
                ||||.||...||.||          |||.||.||||.||   .||||| |||||   .|.|...|||  .
Sbjct  963  ----GAGATTCTCCTGCCT----------CAGCCTCCCAAGCA---GCTGGGACTACA---GGGATGTGCC--A  1014

Query 1092  CCAGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCG-------TGGGATCAAGAGAGACCTTCTA-  1157
            |||||||       |.|..|||.|||             |||.|       |.|.||           ||.|| 
Sbjct 1015  CCAGGCC-------GACGCCACCAGG-------------CCCAGCTAATTTTTGTAT-----------TTTTAG  1057

Query 1158  CAGGATCTCCAAGACGGATGGCGTTTGTGAATGGAAATTTTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTA  1231
            .||        ||||||  ||                  ||||   .|||||         |..||||||||.|
Sbjct 1058  TAG--------AGACGG--GG------------------TTTC---ACCATG---------TTGGCCAGGATGA  1091

Query 1232  CAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAAGTAAAAGCTTTTTGCAGGTCTGCTGCTGT  1305
               |.||.|         .|||.|| |||.||                                          
Sbjct 1092  ---TCTCGA---------TCTCTTG-ACCTCA------------------------------------------  1110

Query 1306  GTAGGGCCCTCAACCCCCAGCCTTGACAAGAACCATCAAGTTCCAACCATTAAGGTCCACACCATCTCCCTCAG  1379
                                                                                      
Sbjct 1111  --------------------------------------------------------------------------  1110

Query 1380  TGAGAACGGGGAGGAAGTC  1398
                               
Sbjct 1111  -------------------  1110