Nucleotide Global Alignment
Description
- Query:
- TRCN0000488486
- Subject:
- NM_001363990.1
- Aligned Length:
- 1642
- Identities:
- 1169
- Gaps:
- 224
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATT-GGCAAGGGGGCTT 73
|||||||||| |.|||||||||||||||||.||.|||||||||||||.|||||| ||| ||||||||.||.|
Sbjct 1 ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT 70
Query 74 TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAA 146
||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||||||||.|||||
Sbjct 71 TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA 143
Query 147 GCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCG 220
|||||||||||||||.||.||||||||||||.|.||.||.||.|||||||||||.||||||||..|||||||||
Sbjct 144 GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG 217
Query 221 TGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC 294
|.||.||.||.|||||||||||.||||||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct 218 TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG 291
Query 295 TTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 368
||||||||.||.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||
Sbjct 292 TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 365
Query 369 CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT 442
.||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||.
Sbjct 366 TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC 439
Query 443 GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT 516
.|||.||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||
Sbjct 440 TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT 513
Query 517 GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT 590
||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|
Sbjct 514 GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT 587
Query 591 CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC 664
.|||||.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...|
Sbjct 588 GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC 661
Query 665 TGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAA 738
||||||||||||||||.||.||.||||||||.|||||.||.||.||.||||||||.|||||.||.||||||||.
Sbjct 662 TGTACCAGCAGATCAAAGCCGGCGCCTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAG 735
Query 739 AACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCG 810
.|.||.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||||.||||||||.
Sbjct 736 GATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCCTTAAGCACCCC 807
Query 811 TGGGTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCA 883
|||.|||..||.||||||||.||.|||||| || |||||||||||||||||.|||||.||.|||||.|||||||
Sbjct 808 TGGATCTCGCACCGCTCCACCGTGGCATCC-TGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCA 880
Query 884 ATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACA 956
||||||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.|||
Sbjct 881 ATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA-- 952
Query 957 GACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTT 1030
.|||.|||
Sbjct 953 ----------------------------------------------------GTGGGGGA-------------- 960
Query 1031 TACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCC 1103
|||||||| ||| |||||.||.||| ||||
Sbjct 961 -----AACAAGAAGAGC-GATGGTGTGAAG--------GAAT-------------------------------- 988
Query 1104 CAAAGGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGG 1177
|||||
Sbjct 989 -------------------------------CCTCA-------------------------------------- 993
Query 1178 AGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAGGAGATCATTAAGACC 1251
||.||..||||.||||||||.||||||||||||.|.||||..|||||.|||||.||.||.||....
Sbjct 994 --------GAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAAAGTG 1059
Query 1252 ACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGAC 1325
||.||||||||.||.||.|||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||
Sbjct 1060 ACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGAC 1133
Query 1326 CTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGC 1399
..|.||.||.|||||.||.|||||.|||||||||||.||..||||||||||..|||||||.||.||.||||||
Sbjct 1134 AGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG- 1206
Query 1400 TGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGC 1472
||| ||..||||||||||||..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.||
Sbjct 1207 TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGC 1280
Query 1473 CTGCATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGA 1544
|||||||||.||||||||..|||||||||||.|.|||| ||| |||...||.||||||..||||||.|||||
Sbjct 1281 CTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGA 1352
Query 1545 GACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG-- 1614
||||||.||.|||||||||||.||.|||||.|||||||.|||.|||||||||.| ||.|||||| |||..|
Sbjct 1353 GACCCGTGTCTGGCACCGCCGGGATGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTC 1425
Query 1615 --GCCCCGCTGCAG 1626
|||||.|
Sbjct 1426 CTGCCCCAC----- 1434