Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- NR_144497.2
- Aligned Length:
- 5786
- Identities:
- 707
- Gaps:
- 5079
Alignment
Query 1 ------------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTC 74
Query 39 TGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGC 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGC 148
Query 113 CGACACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACT 186
||||||||||
Sbjct 149 CGACACCTGA---------------------------------------------------------------- 158
Query 187 CCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGG 260
Sbjct 159 -------------------------------------------------------------------------- 158
Query 261 AGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATAC 334
Sbjct 159 -------------------------------------------------------------------------- 158
Query 335 TGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGA 408
Sbjct 159 -------------------------------------------------------------------------- 158
Query 409 AACACCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCAT 482
Sbjct 159 -------------------------------------------------------------------------- 158
Query 483 GGAAAAATTATTCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGT 556
|||||||||||||||||||||||||||||||||||||
Sbjct 159 -------------------------------------AGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGT 195
Query 557 TGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAA 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 TGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAA 269
Query 631 GAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTC 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 GAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTC 343
Query 705 AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCTGCTGAAGAA 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 344 AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCTGCTGAAGAA 416
Query 779 ATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCC 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 ATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCC 490
Query 853 CAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAG 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 491 CAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAG 564
Query 927 ACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 565 ACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACC 638
Query 1001 AAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCAT 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 AAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCAT 712
Query 1075 GCTGAGGAAGCGTAACCCCCAGGGTTTAGAG------------------------------------------- 1105
|||||||||||||||||||||||||||||||
Sbjct 713 GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGG 786
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 787 TGACCTCTCTCTCCTCAGATTTCCTTCTTGGCCCTGTGCCCTGCACTTTCTTCACTGTGTTCAAGTGTCATAGC 860
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 861 TATCAGGCCACTATCATGGATATCATGTATCCTTCCTGGTGCTCACACACCTGTCACCTTGTAAAACACGGACA 934
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 935 TTAGTGTGAACACAGGACAGCTTCGCTCTTTCTCTTCCTGCCTTTCCTCTATCAGAGAAGTTGATCCATTAAGT 1008
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1009 AATTATGTTTGGTCTATTGTAATTACAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTA 1082
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1083 ACAGATAGTTCACCTGTGAACGAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCA 1156
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1157 GACTCCAAGATCCCTTATTCTTTGGGCCTTGAGCAGGTTAGTAGTCCCCTGGTGAGAAGAGAACATTTTGTTTG 1230
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1231 TGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTT 1304
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1305 CCTAGGAACATTGATGCTGCCTCAGACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATG 1378
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1379 AGCCCAGAGGCTTGTTTGGGGACTGTTTTACTCTGATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTG 1452
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1453 CTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGCTTTAGATAGA 1526
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1527 GACTTTAGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTC 1600
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1601 CTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTCAGA 1674
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1675 AGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCTTACCTAAAGCTGTTTCTGAAT 1748
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1749 GTTGCACCCTTTGAGAAATTTCTTCTCAGAACCATAAATTGAAACAAATGAGGACTGATCTTGTATACAAAGTG 1822
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1823 CCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG 1896
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1897 TGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAGCTGGGGAAAGTAGCAGCAACTAGATTAAGACTGGGAG 1970
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1971 GATTTTGACCAAACTAAAGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTTCTTGAGACAAGATAGCACCCA 2044
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2045 TGAATTACATCATGAGGTATGTGTGAATTCAGTTTACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCA 2118
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2119 AAGACATTCCCAGTCATGAAATGTAGAAGACTGGAAAATTAAGACATTATGTAAAGGTAGATATGGCTTTTAGA 2192
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2193 GTTACATTATGCTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAAATTATACATCAGCATACAGACTGCTGT 2266
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2267 TAGAAGGTATGGGATCATATTAAGATAATCTGTCAGCTACTACTAGGCATTTATTGTTAATTGAGTTACAGAAA 2340
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2341 GTCATTCAAGACTGAGTTTATAGAAAGCATATTGCATCTATCTCTGTGTAGAACATTTGATTCACATTGTGAAG 2414
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2415 AATGCAGTTTAAAATATACTGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTTT 2488
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2489 ACTGTTTAGATAAATTGTTTTCTGTGTTATTTCCCTTCGTTCACTGTGAGGGGTTGATTCATGAGGAGAGCCCT 2562
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2563 GGGTTCCTGGCTCAGGTTTACTTTTGGCCTTAGGATAGGATTCCCTTATTAGAGATAAATACTGCTGTTCTCTT 2636
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2637 CTAGCTCATTCATTCATTTAGCAGTCAATTGCTCAGTGCCAGGTGCTAGGAACAGAGGCTCAATCTCTACCCTC 2710
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2711 AGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAACTATGACCCTGTAAGAGGGCTCAGGATCGT 2784
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2785 GAATCCTGCAGGCAGAGAAACATGAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTC 2858
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2859 CTTAACTGGTCTGAGCTTTGGCTTCAGGGTAGTAAAGGGAGGGGTATTAAAGGTCCTGGTTAAATGAAATCATC 2932
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2933 AGTGTGTGTAAAACAGCATTGGTTCTAGCTCATACATGATAACCACTCATTAAGTGGTAATTATGTTTTTATTA 3006
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3007 TAAGGGCTATGCTGTAATTCAGACATGGGCCCAAAACTACAGGAAAGATAAATTGTTTTTGCTAAAGTATTGCC 3080
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3081 AAGAAACTTCACAGTTTCTTGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTTCAGGTAGGCAAAGAAGAGA 3154
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3155 GGACACTCTTGGCAGAAAGAGTTGTTGAAAAAAGCAGTAGGGTGTGAAAATACATGGATGTTCAAGTATTTTGG 3228
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3229 TGAGGCTGTTATGTAAAGTGTTGTTGGTCTTTGGGGAAAATTGGCTTATGGAAATTCCTGCCAGAAGTACTAAG 3302
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3303 CCCTTATGGTGGTTCTTCCTGCCCTAGCTCTTGGTTGGTTTATATATAAGGAATATATTTGTGTATTTATATAT 3376
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3377 CAGACATTTGGATGTACCTTTCAGTTATTTAGGATTTAGAAAATTCTTTTTGGATTTTCCAGAATTATTTTATC 3450
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3451 CTTCGGGGATGACAGTTATATGTGTATATACAACCCAGGATGACAAAATCATGGGTCCGGTTTTTGTTGCCAGG 3524
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3525 GCTGCTGTCTCTTTTCTTGCGGTCTTCATTTCTCACGAGGGTGCTGGGAACTTGATCAGTCCCCTGGCCTTTTG 3598
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3599 GCACTGTGGCAGAGTACACAAGTCATACCTTTATGGACAGTTAGCTCACAAAACAACTGCATAATCTGGGATCA 3672
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3673 CTCTTGGTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAAGAAACCA 3746
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3747 TTATCTCCATGACTAGCTCCAGAAGCTGGGCCCAGGGAGTCGTGATGAGGAGTGGAGGTGTATTTGGCCTGTAG 3820
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3821 AATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTC 3894
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3895 AAACACTTTGGAAAAAGGGAGCTTTAATATAATTATGCCAAGGTGATAGGCATAAACTAAGACTGTCCTGGACG 3968
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3969 TAGGGTCACCCCTGTCTATAGCCATTTAAGATTTTTGAACCTGATGACTAAACAAACAAAACCCTCTTTCCTTT 4042
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4043 TTAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAA 4116
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4117 ATGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTT 4190
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4191 CTCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAAC 4264
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4265 ATGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTT 4338
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4339 TTTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCAT 4412
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4413 GAATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAG 4486
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4487 GGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGA 4560
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4561 TGTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTG 4634
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4635 CCTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCC 4708
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4709 CTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTT 4782
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4783 TAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAG 4856
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4857 CCCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGA 4930
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4931 CCCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGAT 5004
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5005 GAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATC 5078
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5079 TCTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTA 5152
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5153 GGAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTG 5226
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5227 TTGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGT 5300
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5301 TTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAG 5374
Query 1106 -------------- 1105
Sbjct 5375 CACAGTTTTGCAAA 5388
