Nucleotide Global Alignment
Description
- Query:
- TRCN0000488699
- Subject:
- XM_006501124.2
- Aligned Length:
- 2380
- Identities:
- 892
- Gaps:
- 1371
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCGAGGCCAGCGGCTCGGGCAGCTGGGCTGGCATCGCCCGGCCGCGGGGCTAGGCAGTCTGATGACTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTGATGCTGGCCTGTGCCTCCGCCGCATCCTGTCGCGAGGTCTGCTGTCCCGTGGGCCCCTCGGGGCTGCGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACCAGGGCAGGGTCCCTGGATACCCTCCGCGGCCTGCGGGGCGCCGGGAACCTGACGGAGCTCTACGTGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACCAGCAGCACCTGCAACGCTTGGAGTTTGAGGACCTGCAGGGCCTGGGGGAGTTGAGAAGCCTAACCATCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGAGTGGCCTCCGCTTTGTGGCCCCAGATGCCTTCCGTTTCACCCCTCGGCTCAGTCACCTGAATCTGTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAATGCGTTGGAGTCCCTCTCCTGGAAAACTGTGCAGGGCCTCTCCCTACAGGACCTGACCCTGTCAGGGAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCACTGCATTGTTCCTGTGCCCTGTTCTGGCTCCAGCGTTGGGAGCAGGAAGGGCTGTGTGGTGTGCATACACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACGCTTCATGACTCTGGGCCTGGAGACCAGTTCCTCCCACTGGGACACAACACCAGTTGTGGTGTACCCACAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAGATCCAGATGCCCAATGACTCTGTGGAAGTGGGCGATGACGTGTTTCTGCAGTGCCAGGTGGAGGGGCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCTACAGCAGGCTGACTGGATCCTCACAGAGCTGGAAGGGGCAGCCACCGTGAAGAAATTTGGAGATCTGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCCCTGGGGCTGATTCTGGTCAATGTCACCAGTGATCTCAACAAGAAGAATGTGACGTGCTGGGCAGAGAATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTGGGCCGGGCCGAGGTCTCTGTCCAAGTCAGCGTCTCCTTCCCAGCCAGTGTGCACCTGGGCCTAGCGGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGCAGCATCATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGGTTGTTCAACGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCTGTGCTCAACGAGACCAGTTTCATCTTCACTCAGTTCTTGGAGTCTGCGCTGACTAATGAGACCATGCGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGGCTGCCTGCGCCTCAATCAGCCCACGCATGTCAACAACGGGAACTACACCCTGCTGGCGGCCAACCCCTAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCCAGGCTGCCGCCTCCGTCATGGCTGCTTTTATGGACAACCCTTTTGAGTTCAACCCTGAGGACCCCATCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGACGGTAACAGCACATCAAGAGACCCAGTGGAGAAGAAAGATGAAACCCCTTTTGGGGTCTCTGTGGCTGTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCTAGCCGTCTCTGCCGCCCTCTTCCTTTCTGCCCTCCTTCTTGTGCTCAACAAATGTGGACAGAGGAGCAAA 1332
Query 1 -------------------------------------ATGGGCTGGCCATGTCCCTGCATTTCATGACATTGGG 37
|||||||||||||||||||.||.|||||||||.||||
Sbjct 1333 TTTGGGATCAACCGCCCTGCTGTATTAGCTCCAGAGGATGGGCTGGCCATGTCCCTACACTTCATGACACTGGG 1406
Query 38 TGGCAGCTCCCTGTCCCCCACCGAGGGCAAAGGCTCTGGGCTCCAAGGCCACATCATCGAGAACCCACAATACT 111
||||||.||.||.|||||.||.||||||||||||||.||.|||||.|||||||||||.|||||||||||.||||
Sbjct 1407 TGGCAGTTCTCTTTCCCCTACTGAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCCACAGTACT 1480
Query 112 TCAGTGATGCCTGTGTTCACCACATCAAGCGCCGGGACATCGTGCTCAAGTGGGAGCTGGGGGAGGGCGCCTTT 185
||||||||.|||||||.||.|||||||||||||.|||||||.|.||||||||||||||.||||||||.||||||
Sbjct 1481 TCAGTGATACCTGTGTCCATCACATCAAGCGCCAGGACATCATTCTCAAGTGGGAGCTAGGGGAGGGAGCCTTT 1554
Query 186 GGGAAGGTCTTCCTTGCTGAGTGCCACAACCTCCTGCCTGAGCAGGACAAGATGCTGGTGGCTGTCAAGGCACT 259
||.||||||||.||.|||||||||.|||||||.|||..|||.||||||||||||||.|||||||||||||||||
Sbjct 1555 GGAAAGGTCTTTCTCGCTGAGTGCTACAACCTTCTGAATGATCAGGACAAGATGCTCGTGGCTGTCAAGGCACT 1628
Query 260 GAAGGAGGCGTCCGAGAGTGCTCGGCAGGACTTCCAACGTGAGGCTGAGCTGCTCACCATGCTGCAGCACCAGC 333
|||||||||.|||||||.|||||||||||||||.||.||||||||.|||||||||||||||||.||||||||||
Sbjct 1629 GAAGGAGGCATCCGAGAATGCTCGGCAGGACTTTCAGCGTGAGGCCGAGCTGCTCACCATGCTACAGCACCAGC 1702
Query 334 ACATCGTGCGCTTCTTCGGCGTCTGCACCGAGGGCCGCCCCCTGCTCATGGTCTTTGAGTATATGCGGCACGGG 407
||||||||||||||||.||.||||||||||||||..||||..|||||||||||||||||||.|||||.||||||
Sbjct 1703 ACATCGTGCGCTTCTTTGGAGTCTGCACCGAGGGTGGCCCGTTGCTCATGGTCTTTGAGTACATGCGCCACGGG 1776
Query 408 GACCTCAACCGCTTCCTCCGATCCCATGGACCTGATGCCAAGCTGCTGGCTGGTGGGGAGGATGTGGCTCCAGG 481
|||||||||||.||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||||||||.||
Sbjct 1777 GACCTCAACCGTTTCCTCCGGTCCCACGGACCTGATGCAAAGCTGCTGGCTGGTGGTGAGGATGTGGCTCCTGG 1850
Query 482 CCCCCTGGGTCTGGGGCAGCTGCTGGCCGTGGCTAGCCAGGTCGCTGCGGGGATGGTGTACCTGGCGGGTCTGC 555
.||.|||||.||.||||||||.|||||.||||||||||||||.|||||.||.|||||.||.||.||..|.||||
Sbjct 1851 TCCTCTGGGCCTTGGGCAGCTTCTGGCTGTGGCTAGCCAGGTGGCTGCTGGTATGGTATATCTAGCCAGCCTGC 1924
Query 556 ATTTTGTGCACCGGGACCTGGCCACACGCAACTGTCTAGTGGGCCAGGGACTGGTGGTCAAGATTGGTGATTTT 629
|.||||||||||||||.||||||||||||||||||||.|||||.||||||||.|||||.||||||||.||.|||
Sbjct 1925 ACTTTGTGCACCGGGATCTGGCCACACGCAACTGTCTGGTGGGTCAGGGACTAGTGGTGAAGATTGGAGACTTT 1998
Query 630 GGCATGAGCAGGGATATCTACAGCACCGACTATTACCGTGTGGGAGGCCGCACCATGCTGCCCATTCGCTGGAT 703
|||||||||||.||.|||||.|||||.|||||||||||.||||||||.||.||||||||||||||.||||||||
Sbjct 1999 GGCATGAGCAGAGACATCTATAGCACAGACTATTACCGAGTGGGAGGTCGGACCATGCTGCCCATCCGCTGGAT 2072
Query 704 GCCGCCCGAGAGCATCCTGTACCGTAAGTTCACCACCGAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTCTGGG 777
|||.||||||||||||||.|||||.|||||||.||||||||||||.|||||||||||.||.|||||||||||||
Sbjct 2073 GCCACCCGAGAGCATCCTCTACCGCAAGTTCAGCACCGAGAGCGATGTGTGGAGCTTTGGGGTGGTGCTCTGGG 2146
Query 778 AGATCTTCACCTACGGCAAGCAGCCCTGGTACCAGCTCTCCAACACGGAGGCAATCGACTGCATCACGCAGGGA 851
|||||||||||||.||.|||||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.
Sbjct 2147 AGATCTTCACCTATGGAAAGCAGCCCTGGTACCAGCTCTCCAACACTGAGGCGATCGAGTGTATCACGCAGGGC 2220
Query 852 CGTGAGTTGGAGCGGCCACGTGCCTGCCCACCAGAGGTCTACGCCATCATGCGGGGCTGCTGGCAGCGGGAGCC 925
||.|||.||||||||||.||.||||||||.||.||.|||||||||||||||||.||||||||||||||.||.||
Sbjct 2221 CGGGAGCTGGAGCGGCCGCGCGCCTGCCCTCCTGATGTCTACGCCATCATGCGAGGCTGCTGGCAGCGAGAACC 2294
Query 926 CCAGCAACGCCACAGCATCAAGGATGTGCACGCCCGGCTGCAAGCCCTGGCCCAGGCACC-TCCTGTCTACCTG 998
.||||||||||.||||||.||||||||||||||.||.|||||.||||||||.|||||.|| .||.|| ||||||
Sbjct 2295 GCAGCAACGCCTCAGCATGAAGGATGTGCACGCGCGTCTGCAGGCCCTGGCACAGGCGCCACCCAGT-TACCTG 2367
Query 999 GATGTCCTGGGC 1010
||.||.||||||
Sbjct 2368 GACGTTCTGGGC 2379
