Nucleotide Global Alignment
Description
- Query:
- TRCN0000488920
- Subject:
- XM_005257366.3
- Aligned Length:
- 2420
- Identities:
- 1191
- Gaps:
- 1198
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAG- 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||.||
Sbjct 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAG--------CTGAAGA 140
Query 148 ----------------ACCCCCA--CT-GAGGACGGATCT------------------GAGGA---------AC 175
||||||| || ||.||||.|.|| ||||| .|
Sbjct 141 AGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGAGGAGTTGAGAGTTC 214
Query 176 CGGGC---------------TCTGAAA----------------------------------------------- 187
||||| .||||||
Sbjct 215 CGGGCCGGCAGAGGAAGGCGCCTGAAAGGCCCCTGGCCAATGAGATTAGCGCCCACGTCCAGCCTGGACCCTGC 288
Query 188 -------CCTCTG-------------ATGC---------TAAGAGC---------------------------- 204
|||||| .||| .||||||
Sbjct 289 GGAGAGGCCTCTGGGGTCTCTGGGCCGTGCCTCGGGGAGAAAGAGCCAGAAGCTCCCGTCCCGCTGACCGCGAG 362
Query 205 ----------------------------------ACTCCAACAG------------------------------ 214
.|||||||||
Sbjct 363 CCTTCCTCAGCACCGTCCCGTTTGCCCAGCGCCTCCTCCAACAGGAGGCCCTCAGGAGCCCTCCCTGGAGTGGG 436
Query 215 -----------------------------------------CGGAAG--------------------------- 220
|.||||
Sbjct 437 GACAAAAAGGCGGGGACTGGGCCGAGAAGGGTCCGGCCTTTCCGAAGCCCGCCACCACTGCGTATCTCCACACA 510
Query 221 -------------------------------------------------------------------------- 220
Sbjct 511 GAGCCTGAAAGTGGTAAGGTGGTCCAGGAAGGCTTCCTCCGAGAGCCAGGCCCCCCAGGTCTGAGCCACCAGCT 584
Query 221 -ATGT----------------------------------------------------------------GACAG 229
|||| |||||
Sbjct 585 CATGTCCGGCATGCCTGGGGCTCCCCTCCTGCCTGAGGGCCCCAGAGAGGCCACACGCCAACCTTCGGGGACAG 658
Query 230 CACC-------------------------------------------------CTT------------------ 236
.||| |||
Sbjct 659 GACCTGAGGACACAGAGGGCGGCCGCCACGCCCCTGAGCTGCTCAAGCACCAGCTTCTAGGAGACCTGCACCAG 732
Query 237 --------------------------------------------------------AGTGGATGAGG------- 247
.||||||||.|
Sbjct 733 GAGGGGCCGCCGCTGAAGGGGGCAGGGGGCAAAGAGAGGCCGGGGAGCAAGGAGGAGGTGGATGAAGACCGCGA 806
Query 248 -------GAG--CTCCCGGCAAG--------------------------------------------------- 261
||| |||||..||||
Sbjct 807 CGTCGATGAGTCCTCCCCCCAAGACTCCCCTCCCTCCAAGGCCTCCCCAGCCCAAGATGGGCGGCCTCCCCAGA 880
Query 262 ---------------------------CAGGCTGCC--GCG--------CAGCCCC------------------ 280
||||||.|| ||| ||.||||
Sbjct 881 CAGCCGCCAGAGAAGCCACCAGCATCCCAGGCTTCCCAGCGGAGGGTGCCATCCCCCTCCCTGTGGATTTCCTC 954
Query 281 ----------ACACGGAGATCCCAG------------------------------------AAGG--------- 299
.|||.|||||||||| ||||
Sbjct 955 TCCAAAGTTTCCACAGAGATCCCAGCCTCAGAGCCCGACGGGCCCAGTGTAGGGCGGGCCAAAGGGCAGGATGC 1028
Query 300 ---------------------------AACCACA--------GCTGAAGAAGCAG--------------GCATT 324
||.|||| ||.||||.||||| |||||
Sbjct 1029 CCCCCTGGAGTTCACGTTTCACGTGGAAATCACACCCAACGTGCAGAAGGAGCAGGCGCACTCGGAGGAGCATT 1102
Query 325 GGAGA-------CACCCCCAG-----CCTGGA--------------------------------AGACGA---- 350
.|.|| ||...|||| |||||| |||.||
Sbjct 1103 TGGGAAGGGCTGCATTTCCAGGGGCCCCTGGAGAGGGGCCAGAGGCCCGGGGCCCCTCTTTGGGAGAGGACACA 1176
Query 351 --------------------------------------AGCTGCTG-----------------GTCA--CGTGA 367
.||||||| |||| ||.|.
Sbjct 1177 AAAGAGGCTGACCTTCCAGAGCCCTCTGAAAAGCAGCCTGCTGCTGCTCCGCGGGGGAAGCCCGTCAGCCGGGT 1250
Query 368 CCC--------AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGC-------- 425
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 CCCTCAACTCAAAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGACAT 1324
Query 426 -------------------------------------------------------------------------- 425
Sbjct 1325 CCACACGTTCCTCTGCTAAAACCTTGAAAAATAGGCCTTGCCTTAGCCCCAAACACCCCACTCCTGGTAGCTCA 1398
Query 426 -------------------------------------------------------------------------- 425
Sbjct 1399 GACCCTCTGATCCAACCCTCCAGCCCTGCTGTGTGCCCAGAGCCACCTTCCTCTCCTAAATACGTCTCTTCTGT 1472
Query 426 ------------------------------------------CAAGGGGGCTGATGGTAAAACGAAGATCGCCA 457
||||||||||||||||||||||||||||||||
Sbjct 1473 CACTTCCCGAACTGGCAGTTCTGGAGCAAAGGAGATGAAACTCAAGGGGGCTGATGGTAAAACGAAGATCGCCA 1546
Query 458 CACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCC 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547 CACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCC 1620
Query 532 GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTC 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTC 1694
Query 606 CCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGG 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1695 CCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGG 1768
Query 680 CAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCA 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1769 CAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCA 1842
Query 754 GACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAG----- 822
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 GACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCA 1916
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1917 GATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCC 1990
Query 823 --------------GTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTA 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1991 CGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTA 2064
Query 883 GGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGT 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2065 GGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGT 2138
Query 957 CCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACA 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2139 CCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACA 2212
Query 1031 AGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTG 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2213 AGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTG 2286
Query 1105 TCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCA 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2287 TCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCA 2360
Query 1179 GCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 GCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG 2412
