Nucleotide Global Alignment
Description
- Query:
- TRCN0000489207
- Subject:
- XR_001753681.1
- Aligned Length:
- 3535
- Identities:
- 1846
- Gaps:
- 1689
Alignment
Query 1 -------------------------------------ATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT 37
|||||||||||||||||||||||||||||||||||||
Sbjct 1 AGCGGCCCGCGGCCTCAGCTCTCTCTGCTTCCCCAGGATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT 74
Query 38 CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC 148
Query 112 AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT 222
Query 186 CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC 296
Query 260 AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC 370
Query 334 TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA 444
Query 408 GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA 518
Query 482 ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG 592
Query 556 GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC 666
Query 630 CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA 740
Query 704 TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC 814
Query 778 ATTGTCGTGCACAGCAGGTACTACCGCATGGCAGCCTTCGGCCACCACGCCTACCGCATGCAGGCGGCTGACGT 851
|||||||||||||
Sbjct 815 ATTGTCGTGCACA------------------------------------------------------------- 827
Query 852 GCTCTATGACTGCCTGCCCCTGTACCACTCGGCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGC 925
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 -------------------------------GCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGC 870
Query 926 TGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCACGGTG 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 TGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCACGGTG 944
Query 1000 GTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAAGCAGCCGGTGCGCGAGGCGGAGAGGCGACACCGCGT 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 GTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAAGCAGCCGGTGCGCGAGGCGGAGAGGCGACACCGCGT 1018
Query 1074 GCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCTGGGAGGAGTTCACGGAGCGCTTCGGCGTACGCCAAA 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 GCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCTGGGAGGAGTTCACGGAGCGCTTCGGCGTACGCCAAA 1092
Query 1148 TCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGCATTGCCAACATGGACGGCAAGGTCGGCTCCTGTGGT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 TCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGCATTGCCAACATGGACGGCAAGGTCGGCTCCTGTGGT 1166
Query 1222 TTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCGGCTGGTGAAGGTCAATGAGGACACAATGGAGCTGCT 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 TTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCGGCTGGTGAAGGTCAATGAGGACACAATGGAGCTGCT 1240
Query 1296 GCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCGGGGAGCCTGGCCTCCTTGTGGGTCAGATCAACCAAC 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241 GCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCGGGGAGCCTGGCCTCCTTGTGGGTCAGATCAACCAAC 1314
Query 1370 AGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAGAGCGCCACCAGCAAGAAGATCGCCCACAGCGTCTTC 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 AGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAGAGCGCCACCAGCAAGAAGATCGCCCACAGCGTCTTC 1388
Query 1444 AGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCTAGTGATGGATGAGCTGGGCTACATGTACTTCCGGGA 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 AGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCTAGTGATGGATGAGCTGGGCTACATGTACTTCCGGGA 1462
Query 1518 CCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACGTCTCCACCACCGAGGTGGAGGGCGTGCTGAGCCGCC 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463 CCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACGTCTCCACCACCGAGGTGGAGGGCGTGCTGAGCCGCC 1536
Query 1592 TGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCTGTTCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCC 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 TGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCTGTTCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCC 1610
Query 1666 GTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGATATACCAGGAGCTGCAGAAGGTGCTGGCACCCTATGC 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611 GTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGATATACCAGGAGCTGCAGAAGGTGCTGGCACCCTATGC 1684
Query 1740 CCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACACCACAGGCACCTTCAAGATCCAGAAGACGAGGCTGC 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685 CCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACACCACAGGCACCTTCAAGATCCAGAAGACGAGGCTGC 1758
Query 1814 AGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGGCTCTTCTTCCTGGACCTGAAGCAGGGCCACTACCTG 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759 AGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGGCTCTTCTTCCTGGACCTGAAGCAGGGCCACTACCTG 1832
Query 1888 CCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCTC----------------------- 1938
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 CCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCTCTGAAGCTGTTCCTCTACTGGCCA 1906
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 1907 CAAACTCTGGGCCTGGTGGGAGAGGCCAGCTTGAGCCAGACAGCGCTGCCCAGGGGTGGCCGCCTAGTACACAC 1980
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 1981 CCACCTGGCCGAGCTGTACCTGGCACGGCCCATCCTGGACTGAGAAACTGGAACCTCAGAGGAACCCGTGCCTC 2054
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2055 TCTGCTGCCTTGGTGCCCCTGTGTCTGCCTCCTCTCCCTGCTTTTCAGCCTCTGTCTCCTTCCATCCCTGTCCC 2128
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2129 TGTCTGGCCTTAACTCTTCCCTCTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTAAGATAGAGTCTCACTCT 2202
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2203 GCTGCCCGGGCTAGAGTGCAGTGGTGGGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGGTTCAAGTGATCCT 2276
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2277 CCCACCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGTCCAGCTAATTTTTATATTTTTAGT 2350
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2351 AGAGACGGGGTTTCACCATGTTGGTCAGGTTGGTCTTGAACTCCTGACCTCAGGTGATCCGCTGGCCTCGGCCT 2424
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2425 CCCAGAGTGCTGGGATTATAGGCGTGAGCCTCTGGCCCGGCCTTTCCTTTTTCCTCTCCTCTCCTGCCGAGAGT 2498
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2499 GGAACACGCGTGTCCTGGGAGCTGCATCTTGTGTAGGGTCCAGCTGCTTTTGGGGACTGCAGGAATCATCTCCC 2572
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2573 CTGGGCCCTGGACTCGGACTGGGGCCTCCCCACCTCCCTCTCGGCTGTGCCTTACGGAGCCCCGATCCAGGCCT 2646
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2647 CCTGTGGCTGTTGGGTTCCAGATGCTGCAGCTCCATGTGACTTCCAAGCAGGCCCTCCGCCCTCCCTGCTGAAT 2720
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2721 GGAGGAGCCGGGGGTCCCCCAGGCCAACTGGAAAATCTCCCAGGCTAGGCCAATTGCCTTTTGCACTTCCCCGT 2794
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2795 TCCTGTCACATTTCCCCAGCCCCACCTTCCCCTCCTGATGCCCTGAAAGCTTCCGGAATTGACTGTGACCACTT 2868
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2869 GGATGTCACCACTGTCAGCCCCTGCCTTGATGTCCCCATTTAGCCATCTCCATGGAGCTCCTGCTGGAGGGCCC 2942
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2943 TGAACCCTGCACTGCGTGGCTGCCCAGCCAGCTGCCTCCTGTCCTGGGAGGAGGCCTCCTGGGTGTCCTCATCT 3016
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3017 GGTGTGTCTACTGGAGGGTCCCACAGGAGAGGCAGCAGAGGGGTCAGGGGAGGTCTCCTGCCGGGGGTTGGCCT 3090
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3091 CTCAAGCCTCAGGGGTTCTAGCCTGTTGAATATACCCCACCTGGTGGTGGCCCCTCCGATGTCCCCACTGATGG 3164
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3165 CTCTGACACCGTGTTGGTGGCGATGTCCCAGACAATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTCGCT 3238
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3239 GGTGGCTCATCTCGAACATCCACGCCAGCCTTTCTGGGGCCGGCCACCCAGGCCGCCTGTCCGTCTGTCCTCCC 3312
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3313 TCCAGCAGCACCCCCTGGCCCCTGGAGTGGTGGGGCCATGGCAAGAGACACCGTGGCGTCTCATGTGAACTTTC 3386
Query 1939 --------------------------------------------------------- 1938
Sbjct 3387 CTGGGCACTGTGGTTTTATTTCCTAATTGATTTAAGAAATAAACCTGAAGACCGTCT 3443
