Nucleotide Global Alignment

Description

• Query: TRCN0000489474
• Subject: NR_033819.2
• Aligned Length: 3938
• Identities: 2206
• Gaps: 1732

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGACGTCAGAGCAGGAAGTGTTTGAGGAAGTCGCGCCGCGCTGCCCGCGTTAAGATTCCCGCATTTTAATGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCAGGGGGGTGTCATAGCCCCGGGTTTGGCCGCCCCAGCCCCGCCTTCCCCGCCCCGGGGAGCCCGCCCCCTG  148

Query    1  --------------------------------------ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGT  36
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct  149  CCCCGCGTCCCTGCCGACAGAGTTAGCACGACATCAGTATGAGCTGGTCACCTTCCCTGACAACGCAGACATGT  222

Query   37  GGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAAC  110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAAC  296

Query  111  AGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGA  184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGA  370

Query  185  TCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTG  258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTG  444

Query  259  GCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTT  332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTT  518

Query  333  TGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACC  406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACC  592

Query  407  TTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTA  666

Query  481  ATACACAAAATTATTGACCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGAC  554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATACACAAAATTATTGACCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGAC  740

Query  555  CCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCA  628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCA  814

Query  629  CCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAA  702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAA  888

Query  703  GTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTT  776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTT  962

Query  777  ACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGC  850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGC  1036

Query  851  ACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAAC  924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAAC  1110

Query  925  TTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCT  998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCT  1184

Query  999  GCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGG  1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGG  1258

Query 1073  GCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAGGGCCACACATTG  1146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAGGGCCACACATTG  1332

Query 1147  GACATGGATCTTGTTTTTCTCTTTGACAACAGTAAAATCACCTATGAGACTCAGATCTCCCCACGGCCCCAACC  1220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GACATGGATCTTGTTTTTCTCTTTGACAACAGTAAAATCACCTATGAGACTCAGATCTCCCCACGGCCCCAACC  1406

Query 1221  TGAAAGTGTCAGCTGTATCCTTCAAGAGCCCAAGAGGAATCTCGCCTTCTTCCAGCTGAGGAAGGTGTGGGGCC  1294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGAAAGTGTCAGCTGTATCCTTCAAGAGCCCAAGAGGAATCTCGCCTTCTTCCAGCTGAGGAAGGTGTGGGGCC  1480

Query 1295  AGGTCTGGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATG  1368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGGTCTGGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATG  1554

Query 1369  AATCTCCTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGC  1442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AATCTCCTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGC  1628

Query 1443  CAAGTTGGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCA  1516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAAGTTGGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCA  1702

Query 1517  CATCAGATAAACTGCTGCTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCTCTGTGGGCGGGAGAACGAAGTG  1590
                                                                          ||||||||||||
Sbjct 1703  --------------------------------------------------------------GAGAACGAAGTG  1714

Query 1591  AAACTCCTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAA  1664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1715  AAACTCCTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAA  1788

Query 1665  GCAGGGGGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAG  1738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789  GCAGGGGGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAG  1862

Query 1739  ACCAGCGAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAA  1812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1863  ACCAGCGAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAA  1936

Query 1813  GTGCGAGTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGT  1886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1937  GTGCGAGTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGT  2010

Query 1887  GGAAGAGGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGC  1960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2011  GGAAGAGGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGC  2084

Query 1961  TCTGGAATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCC  2034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2085  TCTGGAATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCC  2158

Query 2035  TCTCGACTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAA  2108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159  TCTCGACTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAA  2232

Query 2109  GAAGAGTGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGA  2182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2233  GAAGAGTGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGA  2306

Query 2183  GGGAACAAGACCAGAGTTTCACGGCCCTAGACTGGAGCTGGTTACAGACGGAAGAAGAAGAGCACAGCTGCCTG  2256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2307  GGGAACAAGACCAGAGTTTCACGGCCCTAGACTGGAGCTGGTTACAGACGGAAGAAGAAGAGCACAGCTGCCTG  2380

Query 2257  GAGCAGGCCTCA--------------------------------------------------------------  2268
            ||||||||||||                                                              
Sbjct 2381  GAGCAGGCCTCATGATGTGGGGGGACTCGACCCCCTGACATGGGGCAGCCCATAGCAGGCCTTGTGCAGTGGGG  2454

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2455  GGACTCGACCCCCTGACATGGGGCTGCCTGGAGCAGGCCGCGTGACGTGGGGCTGCCTGGCCGCGGCTCTCACA  2528

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2529  TGGTGGTTCCTGCTGCACTGATGGCCCAGGGGTCTCTGGTATCCAGATGGAGCTCTCGCTTCCTCAGCAGCTGT  2602

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2603  GACTTTCACCCAGGACCCAGGACGCAGCCCTCCGTGGGCACTGCCGGCGCCTTGTCTGCACACTGGAGGTCCTC  2676

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2677  CATTACAGAGGCCCAGCGCACATCGCTGGCCCCACAAACGTTCAGGGGTACAGCCATGGCAGCTCCTTCCTCTG  2750

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2751  CCGTGAGAAAAGTGCTTGGAGTACGGTTTGCCACACACGTGACTGGACAGTGTCCAATTCAAATCTTTCAGGGC  2824

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2825  AGAGTCCGAGCAGCGCTTGGTGACAGCCTGTCCTCTCCTGCTCTCCAAAGGCCCTGCTCCCTGTCCTCTCTCAC  2898

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2899  TTTACAGCTTGTGTTTCTTCTGGATTCAGCTTCTCCTAAACAGACAGTTTAATTATAGTTGCGGCCTGGCCCCA  2972

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 2973  TCCTCACTTCCTCTTTTTATTTCACTGCTGCTAAAATTGTGTTTTTACCTACTACTTTGGTGGTTGTCCTCTTT  3046

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3047  TCGGCAAAGTTGGAGCGAGTGCCAAGCTCTCCATCTGTGGTCCTTTCTGCCAAGAGCGACTCATAGTAACCAGG  3120

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3121  ATGGGAGAGCAGCTGCCTTATTCTGAATCCCAAAAATTACTTGGGGGTGATTGTCACAGAGGAGGGACAGAAAG  3194

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3195  GGTATCTGCTGACCACCAGCCTGCCTACCCATGCCCATGTCTCCATTCCTGCTCAAGCGTGTGTGCTGGGCCGG  3268

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3269  GGAGTCCCTGTCTCTCACAGCATCTAGCAGTATTATTAAATGGATTCATTTTAAAAATAGCTCCTATATTTTGT  3342

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3343  AACATGTCTCAAACACTCATACTGGGTTCCACAATCCACTGTTAGAATACCTATGGTTAGGGCTTCTGAACTAA  3416

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3417  AATAATGGAAAATTTTAACAATTTGTATAGTGCCTGGATCATTACTAGTGCCATAACCCTGCTTCTTCAACATT  3490

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3491  TCACAGAACTTCTCTTTTATATAAAGGCAAGAGCACAAAATGAGTTCAGATGATCACAAACAGGTGAGTTTTGT  3564

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3565  TGGAGAAGAAAGTTGGAGTAGGAGACTTTCACAAGTGGTTTCCATGGAGATAGAATGAAGCATTCTGTGGTCAA  3638

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3639  GTAAGTTTAGGGAGCTATTCATGTTTCACTTGCTTTGTGGAGATTCACACTATGCACTGGGAAAGTATCTGAAA  3712

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3713  AGTCTTATAATAAAGAAACAGGCTTAACTTTGTGTAAGAACACTGTTTATCAATGTCATTTGGCTATAGAAACA  3786

Query 2269  --------------------------------------------------------------------------  2268
                                                                                      
Sbjct 3787  TTTTCTCCTGCTGATTGTGTGTGTGAAACATGTATTAACATTCCAATGAACTAGCATTTAATAAAGCACAATTT  3860

Query 2269  ----------------  2268
                            
Sbjct 3861  TGGAAACCCTGGTAAA  3876