Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- NR_036434.2
- Aligned Length:
- 3581
- Identities:
- 1343
- Gaps:
- 2222
Alignment
Query 1 ATGATTTTATTTTGA----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTT 59
|.|.||| |.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.
Sbjct 1 --------AGTCTGAGGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTC 62
Query 60 TTTTATAATGCCAACTTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGA 122
| ||| ||| ||.||||||||||||||||||||||||||
Sbjct 63 T--------------------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGA 109
Query 123 TGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 110 TGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTA 183
Query 197 GAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGA 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 GAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGA 257
Query 271 AGAAAACACAGGAGCCGGAGCAGAAGCAAAG------------------------------------------- 301
|||||||||||||||||||||||||||||||
Sbjct 258 AGAAAACACAGGAGCCGGAGCAGAAGCAAAGAGCGTGCTTATGCGCGAAGAGACTGAACTGAAGACGCTGCAGA 331
Query 302 -----------------------------------AGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGA 340
|||||||||||||||||||||||||||||||||||||||
Sbjct 332 CTCAGATAGCAAAATAATAAGCCTACTTCATGATAAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGA 405
Query 341 AACATAAGTCTGAGGAACATAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 AACATAAGTCTGAGGAACATAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAA 479
Query 415 AATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCG 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCG 553
Query 489 TGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 TGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGA 627
Query 563 GATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 GATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCC 701
Query 637 CGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 CGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAA 775
Query 711 GAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAA 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 776 GAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAA 849
Query 785 ACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAA 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 ACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAA 923
Query 859 AAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCT---GCAGCTGCAGCTACTGGAGGTTCTGTTCTCAA 929
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 924 AAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAA 997
Query 930 TGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGC 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 TGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGC 1071
Query 1004 AAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAA 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 AAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAA 1145
Query 1078 TTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGA 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 TTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGA 1219
Query 1152 AATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTG 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 AATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTG 1293
Query 1226 AAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGA 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1294 AAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGA 1367
Query 1300 AATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATC 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1368 AATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATC 1441
Query 1374 TTCAATGCGAGGAATGGATGCAGTT------------------------------------------------- 1398
|||||||||||||||||||||||||
Sbjct 1442 TTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAGACTTCTTGTTCT 1515
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1516 GATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACTTTAATTTATTGA 1589
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1590 AAAATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCA 1663
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1664 TTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCAAATATATAAAAGCTG 1737
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1738 CAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTACTTAACCTTGTA 1811
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1812 CAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTGGCCATTTGGTAC 1885
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1886 ATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTGTTAATTTAAGTT 1959
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1960 ACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGAAAACACTAGCTA 2033
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2034 GAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGTGAGCAAAAATGT 2107
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2108 AAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTGGTATTCAGTATT 2181
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2182 TGTCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTTTTATTTTAATAA 2255
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2256 AGTGCCTTATAACAAGTTCTTTGCATGCTTTTTGCTCATTATCCCTTTGAAGTCTTCTCCAGCATAGACTATAA 2329
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2330 AATATTAAAATATTAGAAATTTTTTTTGTTTGTTTTTTTGAGACAGGATCTTGCTCTGTTGCCTAAACTGGGTG 2403
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2404 CAGTGGCACAATCTCGGCTCACTGCCAGAGCCTCTGCCCCCCAGGTTCAAGCAATTCTCCCACCTCCACCTCCC 2477
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2478 ATGTAACTGGGATTACAGGCGTACCACCGCACCCAGCTAATTTTTGTATTTTTAGTAGAGGTGGGGTTTTACCA 2551
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2552 TGTTGGCCAGGCTGGTCCTGAACTCCTGACCTCAGGTGATCCACCCTCCTCAGCCTCCCAAAGTGCCGGGATTA 2625
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2626 TAGGCGTGAGCCACTGCAGCCAGCCTAGAAAATGTTTTGTTACTAGATTGAACATAAATCTGGAGCCAAGGGGT 2699
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2700 GGGGGGGGCCTGCAAAACTTGAAGTTAATTTACTTCAGTTACAGCAAAGTAATAAGGTTTGGCTTTCCTTTGAA 2773
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2774 AAATCCTTTGGAAAACATCACAGAATGAGAGCACATTACAATCAGGGAAGACTACAGGAATAAGATTGACAGCC 2847
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2848 TTATTTTAAAAGCTGGAATTAAGTCTTGCCAACTTGCTCATTAGGTATTTTTTTTATACATGAAAATGAAGTAA 2921
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2922 TGGGGTGTTTTCTTTTTTTTTGCTTTCTGTCCTAGGCTGGAGTGCAGTGCATTGCAGCAGGCTCCCCCAGGCTC 2995
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2996 AAGCAGTCCTCCCACCTCAGCCTCTTGAGTACCTGGGACCACAGGTGCTCACCAACACACCTAGCTTGTTTTTA 3069
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3070 ATTTTTTATAAAGACAAGGTCTTGTTACGTTGCCCAGGTTGGTCTTGAATTCCTGGCCTCAAGCAATCCTCCCA 3143
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3144 CCTCAGGGCTCCCAAAGTGATGGGGTTACAGGTGTGATCCACTTCACCTAGCCAGATTGTAAGATTTTTAATGT 3217
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3218 ACTTTAATAAACCTTTCATTTTCCCAGAGCACAGAAATTCTATGGCAAAATGGCTTTTCACCGTGTTTCAGTGA 3291
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3292 CAAATCTAAGCCTTCTAAGGAAATGACACTATGGATCCTTCATTTCGTGATCATCAACATTTTTCAATTAAGCT 3365
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3366 CTGCCTTTTTAAATCAATCTTATTAAAAATGTTCATGACCTTCTAAGGCAGTGTGGACGCAAAAGCTTCCTGTG 3439
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3440 TGTCTACAGTTATTTTAGGAGCTGACCATACATGATGAGTGATACAGCCTGTACTTTGCTCATCTAGAGCAGCA 3513
Query 1399 ----------------------------- 1398
Sbjct 3514 CTGTCCAATAAAATATGTGTGTATATGTA 3542
