Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- XM_011248190.2
- Aligned Length:
- 1408
- Identities:
- 1003
- Gaps:
- 293
Alignment
Query 1 ATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTGTACAAAAAAGCAGGCACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGAAAAGACATCAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATCATTATTCAAGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAA--AAC--------ACAGGAGCC 286
|||| .||||| ||| |
Sbjct 1 ----------------------------------------ATGA--TAAGAACCAACTTCTTGTTA-------- 24
Query 287 GGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACAT 360
|||.||||||||||||||||.|||||||||||.||||||||||.|||.|||||||||||.||.
Sbjct 25 -----------AAACAGGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAAGAGACACAAGTCTGAGGAGCAC 87
Query 361 AATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAA 434
|||||||||||||||||||||||.|||||||||||||||.|||||||||||||.||||||||||||||.||.||
Sbjct 88 AATGACAAAGAACATTCTTCTGACAAAGGAAGAGAGCGATTAAATTCATCTGAGAATGGTGAGGACAGACATAA 161
Query 435 ACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTA 508
||||||||||||.|||||||||.|.|||||||||||||||||.|||||.||.||||||||.||||||||.||||
Sbjct 162 ACGCAAAGAAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGTCTAGATCGCGTGAAAGGCGCCATCGCAGTA 235
Query 509 GAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGG 582
||||||||||..||||||||||||||||.|||||||||||.|||||.||.||..||||||||||||||||.|||
Sbjct 236 GAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTCTCGATCCAGAAGCAGAGACAGG 309
Query 583 AAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAG 656
|||||.||.|||||.|||||||||||.||.|||||..|||||||..||||||||||.||.|||||.||||||||
Sbjct 310 AAGAAGTCAAGATCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAGATCCAGACACAG 383
Query 657 GCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAA 730
|||||||||||||||||||||.||..||||||||.|.|||||||||||||||||||||||||||||.||.||||
Sbjct 384 GCATAGGACTAGAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAGAAAGAAGAGAATTGAAAAACCAAGAA 457
Query 731 GATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAG 804
|||||||||||||..||||||||||.||.|||||||.||||||||||||||||||||||||||||||.||.||.
Sbjct 458 GATTTAGCAGAAGCCTAAGCCGGACACCTAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGACGCTCAA 531
Query 805 GAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACA 878
|||||..|||||||.||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||
Sbjct 532 GAAGCACTAGCTAGGAGATTAGAAAGGGCAAAGAAATTACAAGAACAACGAGAAAAGGAAATGGTTGAAAAGCA 605
Query 879 AAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAG 952
.||||||||||||||.||||||||||||||.|||||||||||.|||||.|||||||||||.|||||||||||||
Sbjct 606 GAAACAACAAGAAATGGCTGCAGCTGCAGCCACTGGAGGTTCAGTTCTTAATGTTGCTGCACTGTTGGCATCAG 679
Query 953 GAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACA 1026
||||.||.||.||.|||||||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.
Sbjct 680 GAACGCAGGTTACTCCTCAGATAGCTATGGCAGCTCAAATGGCAGCCCTGCAAGCTAAAGCCTTGGCAGAGACT 753
Query 1027 GGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAG 1100
||.|||||.||.||.||||||||.||||||||.|||||.|||||||||||.||||||||.|||||||||||.||
Sbjct 754 GGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAGAAAAAGAG 827
Query 1101 GAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTG 1174
|||||||||.|||||.||||||||||||||.||||||||.||.|||||||||||.|||||||||||.|||||||
Sbjct 828 GAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGGGAAAAATTAAATTTTG 901
Query 1175 GAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCA 1248
||||||||||||||||||||||||||||.||.||.|||||.|||||||||||||||||||||||.||||||||.
Sbjct 902 GAAACAAGGACCAAAATGTCAAATTTAGAAAGTTAATGGGCATTAAGAGTGAAGATGAAGCTGGCTGTAGCTCC 975
Query 1249 GTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAAT 1322
|||||||||||||||||.||||||.|.|||||.||.||||||||.|||||.|||.|.|||||||||||||||||
Sbjct 976 GTTGATGAAGAAAGTTATAAGACTTTAAAGCAACAAGAAGAAGTTTTTCGCAATCTTGATGCTCAGTATGAAAT 1049
Query 1323 GGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAG 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||
Sbjct 1050 GGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGTGGAATGGATACAG 1123
Query 1397 TT 1398
||
Sbjct 1124 TT 1125