Nucleotide Global Alignment
Description
- Query:
- TRCN0000489560
- Subject:
- XM_017006211.1
- Aligned Length:
- 3068
- Identities:
- 969
- Gaps:
- 2080
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAAACATATCCATTAAATGGGGTATGCCTCCTTTCACCACAAGCTCAAGACTCAAGAAATTTTGGGATGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAATGGAACCAAACCAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAATGAAATTCACACTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTTTATATGGAATCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGCTGATGAGAGTTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGCCTATAGAAAGGAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTTTTCTACAAGAAATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTCCTCTTTGGTTGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAGCTGATGGAGATTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGCCATGCTTGCAGACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTTAACATACATGGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTATGGCATGTACCAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGACACCAGCCAGTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCGTGATAGTACTTGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTGAGTTTTTCTCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGTAAGGAAGGACTGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTCTGGACTACGAGATC 1332
Query 1 -------------------------------------------------------------------ATGA-AA 6
|||| .|
Sbjct 1333 AAGTACTATGAGAAAGTCTACCCACGGATAGCGCCGGCATTTTGGCACTACCTGCGGGTAGAAGAACATGAGCA 1406
Query 7 G-------ACTC-TCCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA-------------- 44
| |||| |||| ||||...|||| |.||| ||.|| |||||
Sbjct 1407 GCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAAT 1477
Query 45 ------------------TGAAAAGTGGGAC----TTTATTGCCT-CAG------------------------- 70
|||.||.||.||| |..|.||.|| |||
Sbjct 1478 ATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGA 1551
Query 71 -------CTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCAC 137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 GATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCAC 1625
Query 138 TCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGT 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 TCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGT 1699
Query 212 CAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCA 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 CAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCA 1773
Query 286 GATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 GATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGA 1847
Query 360 GAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 GAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCC 1921
Query 434 CAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 CAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATC 1995
Query 508 ATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 ATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGG 2069
Query 582 GGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAG 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 GGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAG 2143
Query 656 GGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 GGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGA 2217
Query 730 TCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCAT 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 TCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCAT 2291
Query 804 TGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCA 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 TGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCA 2365
Query 878 ATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTAT 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 ATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTAT 2439
Query 952 ACAACAACT----GACCTCTTCCAAACTCTAACACTTAA-------------------CCTCTGCT-------A 995
||||||||| || |||.|| |.|.||| |.||..|| |
Sbjct 2440 ACAACAACTGGTGGA--------AAAATC---CCCATAAGGTGGACAGCCCCAGAAGCCATCGCCTACAGAAAA 2502
Query 996 TTCT-----GCA-------------------------------------------------------------- 1002
|||| |||
Sbjct 2503 TTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTA 2576
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2577 TTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTC 2650
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2651 CAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGACATT 2724
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2725 GTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCC 2798
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2799 AGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGG 2872
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2873 GGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGATGAC 2946
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2947 ATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTTTACA 3020
Query 1003 ---------------------------------- 1002
Sbjct 3021 CATGATGCACATACAGGAGAAGGGATTTCATGTA 3054
