Nucleotide Global Alignment

Description

• Query: TRCN0000489653
• Subject: NM_001285455.1
• Aligned Length: 1244
• Identities: 821
• Gaps: 294

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA  148
            |         |||||..|||.||||||||||||.||.||||.||||..||||.|.|                  
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAA------------------  97

Query  149  CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGCT  222
                                                                                      
Sbjct   98  --------------------------------------------------------------------------  97

Query  223  GAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGCTCGCATGGT  296
                                                                         |||||||..|||.
Sbjct   98  -------------------------------------------------------------AAGCTCGTGTGGC  110

Query  297  CAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAAA------CGAAGA  364
            |      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.||||      ||||||
Sbjct  111  C------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAAACCGGGGCGAAGA  178

Query  365  TCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACC  438
            ||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.|||
Sbjct  179  TCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGACC  252

Query  439  CCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCC  511
            .||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.||||||||||||||||
Sbjct  253  ACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGCC  325

Query  512  CCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAG  585
            |||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.||||||||||||||||||
Sbjct  326  CCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAAG  399

Query  586  AAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCC  659
            |||||||||||||||||.|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.|||||
Sbjct  400  AAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGCC  473

Query  660  CATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGA  733
            ||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||||.|||||.||.|
Sbjct  474  CATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAGCCAGGAGGTGGCA  547

Query  734  AG------------------------------------------------------------------------  735
            ||                                                                        
Sbjct  548  AGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCGAAGGATAATATCAAA  621

Query  736  ---------------------GTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGG  788
                                 |||||||||||||||||.||.||.|||||||||||.|||||||||||||||||
Sbjct  622  CACGTCCCGGGTGGAGGCAGTGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGG  695

Query  789  CTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGG  862
            |||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||
Sbjct  696  CTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGG  769

Query  863  ACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAA  936
            ||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.|||||.|||||||||
Sbjct  770  ACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAA  843

Query  937  ACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCC  1010
            ||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||
Sbjct  844  ACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACC  917

Query 1011  AGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACT  1084
            .|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.||||
Sbjct  918  CGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACT  991

Query 1085  CGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTGG  1144
            |.||.|||||.|||||.|||||.||.||.||||||||.|||.||||||||||||||||| 
Sbjct  992  CACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG-  1050