Nucleotide Global Alignment
Description
- Query:
- TRCN0000489797
- Subject:
- XM_006539991.3
- Aligned Length:
- 2637
- Identities:
- 1091
- Gaps:
- 1408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGCAGGGTCCCGCTGGCCTGGTGGTTGGCGCTGTGCTGCTGGGGGTGTGCAGCCCATAAGGACACACAGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCTGGCAGCCCGTTTGTGGGGAACCCAGGGAATATCACAGGTGCCAGAGGACTCACGGGGACACTTCGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGAGCTCCAGGTTCAGGGGGAACCCCCTGAGGTGGTGTGGCTTCGAGATGGACAGATCCTAGAACTGGCTGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACACCCAGACCCAGGTGCCTCTGGGCGAAGACTGGCAAGATGAATGGAAAGTTGTCAGTCAGCTCAGAATCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCCTGCAACTTTCAGATGCAGGGGAGTACCAGTGTATGGTGCATCTAGAAGGACGGACCTTTGTGTCTCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGCTTTGTAGGGCTGGAAGGTCTCCCGTACTTCCTGGAGGAGCCTGAGGACAAAGCTGTGCCTGCCAACACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTTTCAACCTAAGCTGCCAGGCCCAGGGACCCCCGGAACCCGTGACCCTACTCTGGCTTCAAGATGCTGTCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGGCCCCAGTCACAGGACACAGCTCCCAGCACAGTCTGCAAACTCCAGGCCTGAACAAGACATCTTCTTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATGTGAAGCCCACAATGCCAAGGGAGTCACCACCTCCCGCACAGCCACCATCACAGTGCTCCCCCAGAGGCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCATCTCCACGTGGTTTCCAGACAACCTACGGAGCTAGAGGTAGCTTGGACCCCTGGCCTGAGTGGCATCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCGCTCACCCACTGCAACCTGCAGGCCGTGCTGTCAGACGATGGGGTGGGTATCTGGCTGGGAAAGTCAGATC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCCTGAAGACCCCCTCACCTTGCAAGTATCAGTGCCCCCCCACCAGCTTCGGCTGGAAAAGCTCCTTCCTCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCCCGTATCACATCCGGATATCCTGCAGCAGCAGCCAGGGCCCCTCACCTTGGACCCACTGGCTTCCTGTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACCACAGAGGGAGTGCCCTTGGGTCCCCCTGAGAACGTTAGCGCCATGCGGAATGGGAGCCAGGTCCTCGTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTGGCAGGAGCCAAGGGTGCCCCTGCAAGGCACCCTGTTAGGGTACCGGCTGGCATATCGAGGCCAGGACACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCGAGGTACTTATGGATATAGGGCTAACTCGAGAGGTGACCTTGGAACTGCGGGGGGACAGGCCTGTGGCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTGACTGTGTCTGTGACAGCCTATACCTCGGCTGGGGATGGGCCCTGGAGCCTTCCTGTGCCCCTAGAGCCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCGCCCAGTGAGTGAACCCCCACCTCGCGCCTTCTCGTGGCCTTGGTGGTATGTACTGCTGGGAGCACTTGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTGCCGCCTGCGTCCTCATCTTGGCCCTGTTCCTTGTCCATCGGAGGAAGAAGGAGACTCGATATGGGGAGGT 1406
Query 1 --TTGAACCAACAGTGGAAAGAGGTGAACTGGTAGTCAGGTACCGCGTGCGCAAGTCCTACAGTCGTCGGACCA 72
||||.|||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||.||.|||||||
Sbjct 1407 GTTTGAGCCAACCGTGGAAAGAGGTGAACTGGTAGTCAGGTACCGTGTCCGAAAGTCCTACAGCCGGCGGACCA 1480
Query 73 CTGAAGCTACCTTGAACAGCTTGGGCATCAGTGAAGAGCTGAAGGAGAAGCTGCGGGATGTGATGGTGGACCGG 146
|||||||.|||||||||||..||||||||||||||||||||||||||||.||.||.||.||.|||||.||.|||
Sbjct 1481 CTGAAGCCACCTTGAACAGTCTGGGCATCAGTGAAGAGCTGAAGGAGAAACTACGAGACGTCATGGTAGATCGG 1554
Query 147 CACAAGGTGGCCCTGGGGAAGACTCTGGGAGAGGGAGAGTTTGGAGCTGTGATGGAAGGCCAGCTCAACCAGGA 220
||.|||||||||.||||||||||.||||||||.|||||.|||||.||||||||||||||.||||||||.|||||
Sbjct 1555 CATAAGGTGGCCTTGGGGAAGACCCTGGGAGAAGGAGAATTTGGCGCTGTGATGGAAGGTCAGCTCAATCAGGA 1628
Query 221 CGACTCCATCCTCAAGGTGGCTGTGAAGACGATGAAGATTGCCATCTGCACGAGGTCAGAGCTGGAGGATTTCC 294
.|||||||||||||||||.|||||||||||.|||||.||||||||||||||.||.|||||||||||||||||||
Sbjct 1629 TGACTCCATCCTCAAGGTCGCTGTGAAGACCATGAAAATTGCCATCTGCACAAGATCAGAGCTGGAGGATTTCC 1702
Query 295 TGAGTGAAGCGGTCTGCATGAAGGAATTTGACCATCCCAACGTCATGAGGCTCATCGGTGTCTGTTTCCAGGGT 368
||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.|||||.
Sbjct 1703 TGAGTGAAGCTGTCTGCATGAAGGAATTTGACCACCCCAACGTCATGAGGCTCATTGGCGTCTGTTTTCAGGGC 1776
Query 369 TCTGAACGAGAGAGCTTCCCAGCACCTGTGGTCATCTTACCTTTCATGAAACATGGAGACCTACACAGCTTCCT 442
|||||..|||||.|.|||||||.|||||||||||||||.||||||||||||||.||||||||||||||.|||||
Sbjct 1777 TCTGACAGAGAGGGTTTCCCAGAACCTGTGGTCATCTTGCCTTTCATGAAACACGGAGACCTACACAGTTTCCT 1850
Query 443 CCTCTATTCCCGGCTCGGGGACCAGCCAGTGTACCTGCCCACTCAGATGCTAGTGAAGTTCATGGCAGACATCG 516
|||.||.|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.|||||.|
Sbjct 1851 CCTGTACTCCCGGCTCGGGGACCAGCCAGTGTTCCTGCCCACTCAGATGCTAGTGAAGTTCATGGCCGACATTG 1924
Query 517 CCAGTGGCATGGAGTATCTGAGTACCAAGAGATTCATACACCGGGACCTGGCGGCCAGGAACTGCATGCTGAAT 590
|||||||.||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 1925 CCAGTGGTATGGAGTACCTGAGTACCAAGAGATTCATACATCGGGACCTGGCTGCCAGGAACTGCATGCTGAAT 1998
Query 591 GAGAACATGTCCGTGTGTGTGGCGGACTTCGGGCTCTCCAAGAAGATCTACAATGGGGACTACTACCGCCAGGG 664
|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||.||
Sbjct 1999 GAGAACATGTCCGTGTGTGTGGCAGACTTCGGGCTCTCCAAGAAGATCTACAACGGGGATTACTACCGCCAAGG 2072
Query 665 ACGTATCGCCAAGATGCCAGTCAAGTGGATTGCCATTGAGAGTCTAGCTGACCGTGTCTACACCAGCAAGAGCG 738
.||.||.||||||||||||||||||||||||||.|||||||||||.||.||.||.|||||||||||||||||||
Sbjct 2073 GCGCATTGCCAAGATGCCAGTCAAGTGGATTGCTATTGAGAGTCTGGCAGATCGGGTCTACACCAGCAAGAGCG 2146
Query 739 ATGTGTGGTCCTTCGGGGTGACAATGTGGGAGATTGCCACAAGAGGCCAAACCCCATATCCGGGCGTGGAGAAC 812
||||||||||||||||.|||||||||||||||||.|||||..||||||||||.||.|||||.||.|||||||||
Sbjct 2147 ATGTGTGGTCCTTCGGTGTGACAATGTGGGAGATCGCCACCCGAGGCCAAACTCCCTATCCAGGGGTGGAGAAC 2220
Query 813 AGCGAGATTTATGACTATCTGCGCCGGGGAAATCGCCTGAAGCAGCCTGCGGACTGTCTGGATGGACTGTATGC 886
||.||||||||.|||||.|||||.|..||||||||.|||||.|||||||.||||||||||||.||.||||||||
Sbjct 2221 AGTGAGATTTACGACTACCTGCGTCAAGGAAATCGGCTGAAACAGCCTGTGGACTGTCTGGACGGCCTGTATGC 2294
Query 887 CTTGATGTCGCGGTGCTGGGAGCTAAATCCCCAGGACCGGCCAAGTTTTACAGAGCTGCGGGAAGATTTGGAGA 960
|.|||||||.|||||||||||.||.||.||.|..|||||||||||||||.|.|||||.||||||||.|||||||
Sbjct 2295 CCTGATGTCTCGGTGCTGGGAACTGAACCCTCGAGACCGGCCAAGTTTTGCGGAGCTCCGGGAAGACTTGGAGA 2368
Query 961 ACACACTGAAGGCCTTGCCTCCTGCCCAGGAGCCTGACGAAATCCTCTATGTCAACATGGATGAGGGTGGAGGT 1034
|||||||||||||..||||.|||||.||||||||.||.|||||||||||||||||||||||||||||.|||.|.
Sbjct 2369 ACACACTGAAGGCTCTGCCCCCTGCTCAGGAGCCAGATGAAATCCTCTATGTCAACATGGATGAGGGCGGAAGC 2442
Query 1035 TATCCTGAACCCCCTGGAGCTGCAGGAGGAGCTGACCCCCCAACCCAGCCAGACCCTAAGGATTCCTGTAGCTG 1108
.|.|.||||||||.|||.|||||.|||||||||||||||||||||||.||.||.||||||||||||||||||||
Sbjct 2443 CACCTTGAACCCCGTGGGGCTGCTGGAGGAGCTGACCCCCCAACCCAACCTGATCCTAAGGATTCCTGTAGCTG 2516
Query 1109 CCTCACTGCGGCTGAGGTCCATCCTGCTGGACGCTATGTCCTCTGCCCTTCCACAACCCCTAGCCCCGCTCAGC 1182
.||||||||.|||||.|||||..|.|||||||||||||||||.||.|||||.|||.||||..|.|||.|||.|.
Sbjct 2517 TCTCACTGCAGCTGACGTCCACTCAGCTGGACGCTATGTCCTTTGTCCTTCTACAGCCCCAGGACCCACTCTGT 2590
Query 1183 CTGCTGATAGGGGCTCCCCAGCAGCCCCAGGGCAGGAGGATGGTGCC 1229
|||||||.||.||||.|||||||.|.||||||||||||||.||.|||
Sbjct 2591 CTGCTGACAGAGGCTGCCCAGCACCTCCAGGGCAGGAGGACGGAGCC 2637
