Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_006521787.2
- Aligned Length:
- 2958
- Identities:
- 888
- Gaps:
- 1948
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGAACACAATAGGCCCATACATACATACCAGGTATGCAATGTCATGGAACCAAACCAGAACAACTGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGTACTAACTGGATCTCTCGTGATGCTGCACAGAAAATTTATGTGGAAATGAAGTTCACACTGAGGGATTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGCATCCCATGGGTCTTGGGGACTTGTAAAGAAACCTTTAACCTGTATTATATAGAATCCGATGAATCCCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACAAAATTCAAGCCAAGCCAATATATAAAGATCGACACAATTGCTGCTGATGAGAGTTTTACTCAGATGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGGGTGACCGCATCCTTAAACTCAACACTGAAATCCGTGAGGTGGGGCCTATAGAAAGGAAAGGATTTTATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCTTTTCAAGATATTGGAGCATGCATCGCTCTGGTCTCAGTCCGAGTTTTCTACAAAAAATGCCCCTTCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCGGAACTTGGCTATGTTTCCTGATACCATCCCAAGGGTTGATTCTTCCTCTTTGGTTGAAGTGCGGGGCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTGTAAAGAGTGCTGAGGAGCGAGATACTCCTAAACTCTACTGTGGAGCTGATGGGGATTGGCTTGTTCCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGGAAGGTGTATCTGCAGTACAGGGTATGAAGAAATCGAGGGTTCTTGCCATGCTTGCAGACCAGGATTCTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGCATTTGCTGGGAACACAAAATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAACGTCAGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGTCATTGTGAAAAGGGTTACTTCCGGGCAGAAAAAGACCCACCTTCTATGGCATGCACTAGACCACCTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCCTAGAAATGTGGCTTTTAACATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCCAGTGACACAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGTTTAGACACTACCCAGTGTGAGGACTGTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGAGGACTCCGCTTCATCCCAAGACACACTGGACTGATCAACAATTCTGTGGTAGTACTGGACTTTGTGTCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGTCAATTATACCTTTGAAATAGAAGCCATGAATGGAGTTTCTGAGTTGAGCATCTCTCCCAAGCCATTCACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTATTACAGTGACTACAGATCACGATGCACCTTCTCTGATTGGTATGATGAGAAAGGACTGGGCATCTCAGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCCTTGCTCTATCGTGGCAAGCACCTGCATTTTCCAATGGAGCTATTCTGGACTATGAGATCAAGTACTACG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAAAGAGCATGAGCAGCTCACCTATTCCTCCACGAGGTCCAAGGCCCCAAGCGTCATCGTCACGGGCCTCAAG 1332
Query 1 ---------------ATGAAAGACTCTCCATTTCA------AGTGA------CAAAA--CTGTACTGGCT-TAA 44
|| |||||| ||||| |.|.| ||..|.||||| .|.
Sbjct 1333 CCCGCCACCACGTACAT------------ATTTCACATCCGAGTGAGGACGGCGACAGGCTACAGTGGCTACAG 1394
Query 45 TGAAAAGTGGGACTTTATTGCCTCAG---------CTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGA 109
|.|.||||..||.| |||...||| |||||||||||||.|||||||||||.||||||||.||.|
Sbjct 1395 TCAGAAGTTTGAAT---TTGAAACAGGAGATGAAACTTCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTCA 1465
Query 110 TAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGT 183
|||||||.||.||.||.||.||||||||||||.|.|||||||||||..|.||||||.|.|||||||||||.|||
Sbjct 1466 TAGCCACTGCAGCCGTCGGGGGATTCACTCTCTTAGTCATCCTCACCCTGTTCTTCCTCATCACTGGGAGGTGT 1539
Query 184 CAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTT 257
||.|||||||||||.|||||.|||||||||||||||||||||||||..|||||||||||.||.||..|||||||
Sbjct 1540 CAATGGTACATAAAGGCCAAAATGAAGTCAGAAGAGAAGAGAAGAACTCACTTACAGAACGGCCACCTGCGCTT 1613
Query 258 CCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGG 331
|||||||||||||||.||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||.|
Sbjct 1614 CCCGGGAATTAAAACATACATTGATCCAGACACCTATGAAGACCCATCCCTAGCAGTCCACGAATTTGCAAAAG 1687
Query 332 AGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGT 405
||||||||||.|||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.|||||||||
Sbjct 1688 AGATTGATCCTTCAAGAATTCGCATTGAGAGAGTGATTGGAGCAGGTGAATTTGGAGAAGTCTGCAGTGGGCGT 1761
Query 406 TTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAG 479
||||||||||||||||||||.||||||||||||||.||||||||.||||||||||||||||||||.||.|||||
Sbjct 1762 TTGAAGACACCAGGGAAAAGGGAGATCCCAGTTGCAATTAAAACATTGAAAGGTGGCCACATGGACCGACAAAG 1835
Query 480 AAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTG 553
||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||||||.||||
Sbjct 1836 AAGAGATTTTCTAAGAGAAGCTAGCATCATGGGTCAGTTTGACCACCCAAACATCATTCGCCTAGAAGGTGTTG 1909
Query 554 TCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAAT 627
||||.|||||||||||||||||.|||||||||||.||.||.||||||||||||||.|||||.||||||||||||
Sbjct 1910 TCACTAAAAGATCCTTCCCGGCGATTGGGGTGGAAGCCTTCTGCCCCAGCTTCCTAAGGGCTGGGTTTTTAAAT 1983
Query 628 AGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAAT 701
.|||||||.||.||.|||||||||.|.|..|||||.|||.|||||||||||||||||||.||..|.||||||||
Sbjct 1984 GGCATCCAAGCGCCACATCCAGTGACTGCAGGAGGCTCTCTGCCCCCCAGGATTCCTGCAGGTCGGCCAGTAAT 2057
Query 702 GATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCA 775
|||.||.||.||.|||||||||||||||||.||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 2058 GATCGTAGTAGAGTATATGGAGAATGGATCACTGGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACCGTCA 2131
Query 776 TCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGA 849
|||||||||||||.|||||..|.|||||.||.|||||||||||||||||||||||.|||||.||||||||||||
Sbjct 2132 TCCAGTTGGTCGGCATGCTGAGGGGCATCGCGTCAGGCATGAAGTATCTTTCTGACATGGGATATGTTCATCGA 2205
Query 850 GACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGT 923
||.||.||.||..||||.||||||||.||.|||||||||||||||||.||.||||||||||||||||||.||||
Sbjct 2206 GATCTTGCCGCGAGGAACATACTGGTGAACAGCAACTTAGTATGCAAGGTCTCTGATTTTGGTCTCTCCCGAGT 2279
Query 924 GCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG------ACCTCTTCCAAACTCTA--------ACA-- 981
|||||||||||||||||||||.||||||||||||||.| | ||.|.||| |||
Sbjct 2280 GCTGGAAGATGATCCAGAAGCAGCTTATACAACAACGGGAGGGAA--------AATCCCTATACGGTGGACAGC 2345
Query 982 --CTTAACCTCTGCTATTCTGCATAAATTCTGAGAAA---------AGCCA-------------------AATT 1025
|..|| ||||| |||.|| .||||| ||||| .|||
Sbjct 2346 CCCAGAA-----GCTAT--TGCTTA------CAGAAAGTTCTCCTCAGCCAGTGACGCGTGGAGCTACGGGATT 2406
Query 1026 TTC-TGTCGG---------TCTAAGAAGACA------------------------------------------- 1046
.|| |||.|| .|||.|.|||.|
Sbjct 2407 GTCATGTGGGAGGTGATGTCCTATGGAGAGAGACCGTACTGGGAAATGTCCAACCAGGATGTTATCTTGTCCAT 2480
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2481 TGAAGAAGGTTACCGACTTCCTGCTCCGATGGGCTGCCCACCGTCTCTGCACCAGCTGATGCTCCACTGCTGGC 2554
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2555 AGAAGGAGAGAAACCACAGGCCAAAATTCACTGACATCGTCAGCTTCCTTGACAAACTGATCCGCAACCCCAGT 2628
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2629 GCCCTTCACACGCTGGTGGAGGACATCCTTGTAATGCCAGAATCCCCTGGTGATGTTCCTGAATATCCATTGTT 2702
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2703 TGTCACAGTAGGTGACTGGCTGGATTCTATAAAGATGGGGCAATACAAGAGTAACTTCATGGCAGCGGGTTTTA 2776
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2777 CAACGTTTGATCTGATTTCACGAATGAGCATCGATGATATTAGGCGAATTGGAGTCATTCTCATTGGACATCAG 2850
Query 1047 ------------------------------------------------------------------------ 1046
Sbjct 2851 AGACGAATAGTCAGCAGCATACAAACTTTACGTTTACATATGATGCACATACAGGAAAAAGGATTTCATGTA 2922
