Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006210.1
- Aligned Length:
- 3442
- Identities:
- 880
- Gaps:
- 2526
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAATTCCCCTCGCCTCCAGCCGCGAGGAGCTCCCCGGCGCCGCAGGCAGCGTCCTCCTCCGAAGCAGCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGCAACTGGGCAGCCTGGACCCTCGTGCCCTGTTCCCGGGACCTCGCGCAGGGGGCGCCCCGGGACACCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCGGGCCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGACGTGGACAAGGACCCCCATCCTACCCAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCTGCCTGCGCTGCCGCCACTTCTCTTTAAGGGAGAGGAAAAGAGAGCCTAGGAGAACCATGGGGGGCTGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCTCTGCTGACAGCGTGGCCAGGCGACTGCAGTCACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTCCAACAACCAAGTTGTGTTGCTTGATACAACAACTGTACTGGGAGAGCTAGGATGGAAAACATATCCATTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGGTGGGATGCCATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAACCAAACCAAAACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAATTCACACTAAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATATGGAATCAGATGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGAGAGTTTTACCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTATAGAAAGGAAAGGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTACAAGAAATGCCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCTTTGGTTGAAGTACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGATGGAGATTGGCTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CATGCTTGCAGACCAGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGACTACGAGATCAAGTACTATGAGAAAGTCTACCCACGGATAGCGCCGGCATTTTGGCACTACCTGCGGGTA 1776
Query 1 -------ATGA-AAG-------ACTC-TCCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA 44
|||| .|| |||| |||| ||||...|||| |.||| ||.|| |||||
Sbjct 1777 GAAGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAA 1847
Query 45 --------------------------------TGAAAAGTGGGAC----TTTATTGCCT-CAG----------- 70
|||.||.||.||| |..|.||.|| |||
Sbjct 1848 GCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTG 1921
Query 71 ---------------------CTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCT 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 AATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCT 1995
Query 124 GTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 GTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAA 2069
Query 198 AGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAA 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 AGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAA 2143
Query 272 CTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCA 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 CTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCA 2217
Query 346 AGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGG 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 AGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGG 2291
Query 420 GAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAA 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 GAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAA 2365
Query 494 GAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCC 567
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 GAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAA----- 2434
Query 568 TTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCC 641
Sbjct 2435 -------------------------------------------------------------------------- 2434
Query 642 GCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAAT 715
|||||||||||||||||||||||||||
Sbjct 2435 -----------------------------------------------GCAGACCAGTAATGATTGTGGTGGAAT 2461
Query 716 ATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGA 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2462 ATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGA 2535
Query 790 ATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCG 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2536 ATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCG 2609
Query 864 GAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATC 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2610 GAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATC 2683
Query 938 CAGAAGCTGCTTATACAACAACTG---------ACCTCTT-------------CCAAA--------CTCTA--- 978
|||||||||||||||||||||||| .||.|.| |||.| | |||
Sbjct 2684 CAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAG 2756
Query 979 ACACTTAACCTC----------------TGCTAT---------------------------TCTGCATAAA--- 1006
|.|.||..|||| .||||| |.||.|.|.|
Sbjct 2757 AAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGAC 2830
Query 1007 --TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG---ACA-------------------- 1046
|..||.|||| |.||||..| |||||||..|..|||||| |||
Sbjct 2831 CTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGC 2904
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2905 TGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGA 2978
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2979 CATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAA 3052
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3053 TGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAG 3126
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3127 ATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGA 3200
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3201 TGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTT 3274
Query 1047 -------------------------------------- 1046
Sbjct 3275 TACACATGATGCACATACAGGAGAAGGGATTTCATGTA 3312
