Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006211.1
- Aligned Length:
- 3058
- Identities:
- 1006
- Gaps:
- 2016
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAAACATATCCATTAAATGGGGTATGCCTCCTTTCACCACAAGCTCAAGACTCAAGAAATTTTGGGATGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAATGGAACCAAACCAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAATGAAATTCACACTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTTTATATGGAATCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGCTGATGAGAGTTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGCCTATAGAAAGGAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTTTTCTACAAGAAATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTCCTCTTTGGTTGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAGCTGATGGAGATTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGCCATGCTTGCAGACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTTAACATACATGGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTATGGCATGTACCAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGACACCAGCCAGTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCGTGATAGTACTTGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTGAGTTTTTCTCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGTAAGGAAGGACTGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTCTGGACTACGAGATC 1332
Query 1 -------------------------------------------------------------------ATGA-AA 6
|||| .|
Sbjct 1333 AAGTACTATGAGAAAGTCTACCCACGGATAGCGCCGGCATTTTGGCACTACCTGCGGGTAGAAGAACATGAGCA 1406
Query 7 G-------ACTC-TCCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA-------------- 44
| |||| |||| ||||...|||| |.||| ||.|| |||||
Sbjct 1407 GCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAAT 1477
Query 45 ------------------TGAAAAGTGGGAC----TTTATTGCCT-CAG------------------------- 70
|||.||.||.||| |..|.||.|| |||
Sbjct 1478 ATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGA 1551
Query 71 -------CTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCAC 137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 GATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCAC 1625
Query 138 TCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGT 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 TCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGT 1699
Query 212 CAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCA 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 CAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCA 1773
Query 286 GATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 GATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGA 1847
Query 360 GAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 GAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCC 1921
Query 434 CAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 CAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATC 1995
Query 508 ATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 ATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGG 2069
Query 582 GGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAG 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 GGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAG 2143
Query 656 GGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 GGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGA 2217
Query 730 TCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCAT 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 TCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCAT 2291
Query 804 TGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCA 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 TGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCA 2365
Query 878 ATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTAT 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 ATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTAT 2439
Query 952 ACAACAACTG---------ACCTCTT-------------CCAAA--------CTCTA---ACACTTAACCTC-- 990
|||||||||| .||.|.| |||.| | ||| |.|.||..||||
Sbjct 2440 ACAACAACTGGTGGAAAAATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAG 2512
Query 991 --------------TGCTAT---------------------------TCTGCATAAA-----TTCTGAGAAA-- 1016
.||||| |.||.|.|.| |..||.||||
Sbjct 2513 CAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATG 2586
Query 1017 ---AGCCAAATT----TTCTGTCGGTCTAAGAAG---ACA---------------------------------- 1046
|.||||..| |||||||..|..|||||| |||
Sbjct 2587 TCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCT 2660
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2661 ACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCC 2734
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2735 TTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCT 2808
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2809 GGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAA 2882
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2883 GAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAA 2956
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2957 TTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTTTACACATGATGCAC 3030
Query 1047 ------------------------ 1046
Sbjct 3031 ATACAGGAGAAGGGATTTCATGTA 3054
