Nucleotide Global Alignment

Description

Query:
TRCN0000489874
Subject:
NM_001316893.2
Aligned Length:
995
Identities:
450
Gaps:
511

Alignment

Query   1  ATGGGTGGTGTCATAAAGAGCATATTTACATTCGTTTTAATTGTGGAATTTATAATTGGAAATTTAGGAAATAG  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  TTTCATAGCACTGGTGAACTGTATTGACTGGGTCAAGGGAAGAAAGATCTCTTCGGTTGATCGGATCCTCACTG  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  CTTTGGCAATCTCTCGAATTAGCCTGGTTTGGTTAATATTCGGAAGCTGGTGTGTGTCTGTGTTTTTCCCAGCT  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  TTATTTGCCACTGAAAAAATGTTCAGAATGCTTACTAATATCTGGACAGTGATCAATCATTTTAGTGTCTGGTT  296
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 297  AGCTACAGGCCTCGGTACTTTTTATTTTCTCAAGATAGCCAATTTTTCTAACTCTATTTTTCTCTACCTAAAGT  370
                                                                                 |.||
Sbjct   1  ----------------------------------------------------------------------ATGT  4

Query 371  GGAGGGTTAAAAAGGTGGTTTTGGTGCTGCTTCT-------TGTGACTTCG-GTCT---TCTTGTTTTTAAATA  433
           ||||||..|.|.|             ||.|.|||       ||.||.||.| ||||   || ||||        
Sbjct   5  GGAGGGGAATAGA-------------CTCCATCTATCCATATGAGAGTTGGAGTCTCACTC-TGTT--------  56

Query 434  TTGCACTGATAAACATCCATATAAATGCC---AGTATCAATGGATACAGAAGAAACAAGACT---TGCAGTTCT  501
                         |||||       |.|   ||| |||.||      |.||.|.||.|.||   ||||| |||
Sbjct  57  --------------ATCCA-------GGCTGGAGT-TCAGTG------GTAGGATCATGGCTTACTGCAG-TCT  101

Query 502  GATTCAAGTAACT-------TTACACGATTTTC------CAGTCTTAT--TGTATTAACCAGCACTGTGTTCAT  560
                  |.||||       |.|.||.||..||      |||.|||.|  ||       |||.|    |...||
Sbjct 102  -------GGAACTCCTGGGCTCAAACCATCCTCCCACCTCAGCCTTCTGCTG-------CAGAA----GAATAT  157

Query 561  TTTCATACCCTTTACTTTGTCCCTGGCAA-----TGTTTCTTCTCCTCATCTTCTCCA-TGTGGAA------AC  622
           |||    .|||          .|||| ||     |||           ||||.|||.| .||||||      ||
Sbjct 158  TTT----GCCT----------GCTGG-AACCTGCTGT-----------ATCTACTCAAGAGTGGAAGTTTTCAC  205

Query 623  ATCGCAAGAAGATGCAGCACACTGTCAAAATATCCGGAGACGCCAGCACCAAAGCCCACAGAGGAGTTAAAAGT  696
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206  ------AGAAGATGCAGCACACTGTCAAAATATCCGGAGACGCCAGCACCAAAGCCCACAGAGGAGTTAAAAGT  273

Query 697  GTGATCACTTTCTTCCTACTCTATGCCATTTTCTCTCTGTCTTTTTTCATATCAGTTTGGACCTCTGAAAGGTT  770
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274  GTGATCACTTTCTTCCTACTCTATGCCATTTTCTCTCTGTCTTTTTTCATATCAGTTTGGACCTCTGAAAGGTT  347

Query 771  GGAGGAAAATCTAATTATTCTTTCCCAGGTGATGGGAATGGCTTATCCTTCATGTCACTCATGTGTTCTGATTC  844
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348  GGAGGAAAATCTAATTATTCTTTCCCAGGTGATGGGAATGGCTTATCCTTCATGTCACTCATGTGTTCTGATTC  421

Query 845  TTGGAAACAAGAAGCTGAGACAGGCCTCTCTGTCAGTGCTACTGTGGCTGAGGTACATGTTCAAAGATGGGGAG  918
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422  TTGGAAACAAGAAGCTGAGACAGGCCTCTCTGTCAGTGCTACTGTGGCTGAGGTACATGTTCAAAGATGGGGAG  495

Query 919  CCCTCAGGTCACAAAGAATTTAGAGAATCATCT  951
           |||||||||||||||||||||||||||||||||
Sbjct 496  CCCTCAGGTCACAAAGAATTTAGAGAATCATCT  528