Nucleotide Global Alignment
Description
- Query:
- TRCN0000491252
- Subject:
- NM_001290549.1
- Aligned Length:
- 3366
- Identities:
- 819
- Gaps:
- 2458
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACTCTTTAGCCGGCTTAGTTCTCTGTGGAGTCAGCTTGCTCCTTTATGGAGTAGTAGAAGGCGCCATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGATCTTGATCAATTCCCTACCTCTTGTGTCTGATGCCGAAACATCCCTCACCTGCATTGCCTCTGGGTGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCCCCATGAGCCCATCACCATAGGAAGGGACTTTGAAGCCTTAATGAACCAGCACCAAGATCCACTGGAGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTCAAGATGTGACCAGAGAATGGGCGAAAAAAGTTGTTTGGAAGAGAGAAAAGGCCAGTAAGATTAATGGTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTATTTCTGTGAAGGTCGAGTTCGAGGACAGGCTATAAGGATACGGACCATGAAGATGCGTCAACAAGCATCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCTACCTGCTACTTTAACTATGACCGTGGACAGGGGAGATAATGTGAACATATCTTTCAAAAAGGTGTTAATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGAAGAAGATGCAGTGATTTACAAAAATGGCTCCTTCATCCACTCAGTGCCCCGGCATGAAGTACCTGATAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAGAAGTTCACTTGCCGCATGCTCAGCCCCAGGATGCTGGTGTGTACTCGGCCAGGTACATAGGAGGAAACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTTCACCTCAGCCTTCACCAGGCTGATTGTTCGGAGATGTGAAGCTCAGAAGTGGGGGCCCGACTGTAGCCGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTGTACTACTTGCAAGAACAATGGAGTCTGCCATGAAGATACCGGGGAATGCATTTGCCCTCCTGGGTTTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGGAGAACATGTGAGAAAGCTTGTGAGCCGCACACATTTGGCAGGACCTGTAAAGAAAGGTGTAGTGGACCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGATGCAAGTCTTATGTGTTCTGTCTCCCAGACCCTTACGGGTGTTCCTGTGCCACAGGCTGGAGGGGGTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTGCAATGAAGCATGCCCATCTGGTTACTACGGACCAGACTGTAAGCTCAGGTGCCACTGTACCAATGAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATATGTGATCGGTTCCAAGGATGCCTCTGCTCTCAAGGATGGCAAGGGCTGCAGTGTGAGAAAGAAGGCAGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAGGATGACTCCACAGATAGAGGATTTGCCAGATCACATTGAAGTAAACAGTGGAAAATTTAACCCCATCTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAGCCTCTGGGTGGCCACTACCTACTAGTGAAGAAATGACCCTAGTGAAGCCAGATGGGACAGTGCTCCAACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATGACTTCAACTATACAGATCGTTTCTCAGTGGCCATATTCACTGTCAACCGAGTCTTACCTCCTGACTCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGTCTGGGTCTGCAGTGTGAACACAGTGGCTGGGATGGTGGAAAAGCCTTTCAACATTTCCGTCAAAGTTCTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCAGAGCCCCTGCACGCCCCAAATGTGATTGACACTGGACATAACTTTGCTATCATCAATATCAGCTCTGAGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTACTTTGGGGATGGACCCATCAAATCCAAGAAGCTTTTCTATAAACCTGTCAATCAGGCCTGGAAATACATTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAGTGACGAATGAGATTTTCACTCTCAACTACTTGGAGCCGCGGACTGACTACGAGCTGTGTGTGCAGCTGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGTCCTGGAGAGGGTGGAGAAGGGCATCCTGGGCCTGTGAGACGATTTACAACAGCGTCTATCGGACTCCCTCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCAAGAGGTCTCAGTCTCCTGCCAAAAAGCCAGACAGCTCTAAATTTGACTTGGCAACCGATATTTACAAACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAAGATGAATTTTATGTGGAAGTCGAGAGGCGATCCCTGCAAACAACAAGTGATCAGCAGAACATCAAAGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTGGGAACCTGACCTCGGTGCTACTGAGCAACTTAGTCCCCAGGGAGCAGTACACAGTCCGAGCTAGAGTCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CACCAAGGCGCAGGGGGAGTGGAGTGAAGAACTCAGGGCCTGGACCCTTAGTGACATTCTCCCTCCTCAACCAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAACATCAAGATCTCCAACATCACTGACTCCACAGCTATGGTTTCTTGGACAATAGTGGATGGCTATTCGATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTTCCATCATCATCCGGTATAAGGTTCAGGGCAAAAATGAAGACCAGCACATTGATGTGAAGATCAAGAATGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TACCGTTACTCAGTACCAGCTCAAGGGCCTAGAGCCAGAGACTACATACCATGTGGATATTTTTGCTGAGAACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACATAGGATCAAGCAACCCAGCCTTTTCTCATGAACTGAGGACGCTTCCACATTCCCCAGCCTCTGCAGACCTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGAGGGGGAAAGATGCTACTCATAGCCATCCTTGGGTCGGCTGGAATGACTTGCATCACCGTGCTGTTGGCGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCTGATTATGTTGCAACTGAAGAGAGCAAATGTCCAAAGGAGAATGGCTCAGGCATTCCAGAACAGAGAAGAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGCTGTGCAGTTTAACTCAGGAACTCTGGCCCTTAACAGGAAGGCCAAAAACAATCCGGATCCCACAATTTAT 2442
Query 1 ----------------ATGACATCAAATTTCAAGATGTGATTGGGGAGGGCAATTTTGGCCAAGTTCTTAAGGC 58
||||||||||.||||||||.|||||.||.||||||||.||||||||.|||||.|||||
Sbjct 2443 CCTGTGCTTGACTGGAATGACATCAAGTTTCAAGACGTGATCGGAGAGGGCAACTTTGGCCAGGTTCTGAAGGC 2516
Query 59 GCGCATCAAGAAGGATGGGTTACGGATGGATGCTGCCATCAAAAGAATGAAAGAATATGCCTCCAAAGATGATC 132
.||||||||||||||||||||||||||||||||.||||||||.||.||||||||.|||||||||||||||||||
Sbjct 2517 ACGCATCAAGAAGGATGGGTTACGGATGGATGCCGCCATCAAGAGGATGAAAGAGTATGCCTCCAAAGATGATC 2590
Query 133 ACAGGGACTTTGCAGGAGAACTGGAAGTTCTTTGTAAACTTGGACACCATCCAAACATCATCAATCTCTTAGGA 206
||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 2591 ACAGGGACTTCGCAGGAGAACTGGAGGTTCTTTGTAAACTTGGACACCATCCAAACATCATTAATCTCTTGGGA 2664
Query 207 GCATGTGAACATCGAGGCTACTTGTACCTGGCCATTGAGTACGCGCCCCATGGAAACCTTCTGGACTTCCTTCG 280
|||||||||||.||||||||.||||||||.||.||||||||.||.||.|||||||||||.|||||||||||.||
Sbjct 2665 GCATGTGAACACCGAGGCTATTTGTACCTAGCTATTGAGTATGCCCCGCATGGAAACCTCCTGGACTTCCTGCG 2738
Query 281 CAAGAGCCGTGTGCTGGAGACGGACCCAGCATTTGCCATTGCCAATAGCACCGCGTCCACACTGTCCTCCCAGC 354
.||||||.|.|||||.|||||.|||||.||.||||||||.|||||.||.||.||.|||||||||||||||||.|
Sbjct 2739 TAAGAGCAGAGTGCTAGAGACAGACCCTGCTTTTGCCATCGCCAACAGTACAGCTTCCACACTGTCCTCCCAAC 2812
Query 355 AGCTCCTTCACTTCGCTGCCGACGTGGCCCGGGGCATGGACTACTTGAGCCAAAAACAGTTTATCCACAGGGAT 428
||||.|||||.||.|||||.||.|||||||||||.|||||||||||||||||.||||||||||||||||||||.
Sbjct 2813 AGCTTCTTCATTTTGCTGCAGATGTGGCCCGGGGGATGGACTACTTGAGCCAGAAACAGTTTATCCACAGGGAC 2886
Query 429 CTGGCTGCCAGAAACATTTTAGTTGGTGAAAACTATGTGGCAAAAATAGCAGATTTTGGATTGTCCCGAGGTCA 502
|||||||||||||||||||||||||||||||||||..|.||.|||||||||||||||||||||||.||||||||
Sbjct 2887 CTGGCTGCCAGAAACATTTTAGTTGGTGAAAACTACATAGCCAAAATAGCAGATTTTGGATTGTCACGAGGTCA 2960
Query 503 AGAGGTGTATGTGAAAAAGACAATGGGAAGGCTCCCAGTGCGCTGGATGGCCATCGAGTCACTGAATTACAGTG 576
|||.||||||||||||||||||||||||||||||||||||||.||||||||.|||||.||||||||.||.||||
Sbjct 2961 AGAAGTGTATGTGAAAAAGACAATGGGAAGGCTCCCAGTGCGTTGGATGGCAATCGAATCACTGAACTATAGTG 3034
Query 577 TGTACACAACCAACAGTGATGTATGGTCCTATGGTGTGTTACTATGGGAGATTGTTAGCTTAGGAGGCACACCC 650
|.||.|||||||||||||||||.||||||||||||||.||.||.||||||||||||||||||||||||||.|||
Sbjct 3035 TCTATACAACCAACAGTGATGTCTGGTCCTATGGTGTATTGCTCTGGGAGATTGTTAGCTTAGGAGGCACCCCC 3108
Query 651 TACTGCGGGATGACTTGTGCAGAACTCTACGAGAAGCTGCCCCAGGGCTACAGACTGGAGAAGCCCCTGAACTG 724
||||||||.|||||.||.||.||.|||||.||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 3109 TACTGCGGCATGACGTGCGCGGAGCTCTATGAGAAGCTACCCCAGGGCTACAGGCTGGAGAAGCCCCTGAACTG 3182
Query 725 TGATGATGAGGTGTATGATCTAATGAGACAATGCTGGCGGGAGAAGCCTTATGAGAGGCCATCATTTGCCCAGA 798
||||||||||||||||||||||||||||||.||||||.|||||||||||||||||||.||||||||||||||||
Sbjct 3183 TGATGATGAGGTGTATGATCTAATGAGACAGTGCTGGAGGGAGAAGCCTTATGAGAGACCATCATTTGCCCAGA 3256
Query 799 TATTGGTGTCCTTAAACAGAATGTTAGAGGAGCGAAAGACCTACGTGAATACCACGCTTTATGAGAAGTTTACT 872
|||||||||||||||||||.|||.|.||.||.||.|||||.||||||||.|||||.||.||||||||||||||.
Sbjct 3257 TATTGGTGTCCTTAAACAGGATGCTGGAAGAACGGAAGACATACGTGAACACCACACTGTATGAGAAGTTTACC 3330
Query 873 TATGCAGGAATTGACTGTTCTGCTGAAGAAGCGGCC 908
|||||||||||||||||.|||||.||||||||.|||
Sbjct 3331 TATGCAGGAATTGACTGCTCTGCGGAAGAAGCAGCC 3366
