Nucleotide Global Alignment

Description

Query:
TRCN0000491360
Subject:
NR_146950.1
Aligned Length:
2217
Identities:
915
Gaps:
1302

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCATCCGGGCTCCCGGCAGCGGCGCTGCGGCGGCTCGCGGGAGACGCTGCGCGCGGGGCTAGCGGGCGGCGGA  74

Query    1  ------------------------------------------------------------ATGGCAGGCTCCCT  14
                                                                        ||||||||||||||
Sbjct   75  GCGGACGGCGACGGGGCGCTCTCGGGCTGCCGGCGGGGCCGAGCGCCGCGCGTCCCGAGCATGGCAGGCTCCCT  148

Query   15  GCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCCCCAGTTCA  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCCCCAGTTCA  222

Query   89  TTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA  162
            ||||||||||||                                                              
Sbjct  223  TTATTCCTTCAT--------------------------------------------------------------  234

Query  163  GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG  236
                                                                           |||||||||||
Sbjct  235  ---------------------------------------------------------------TGGCCGATACG  245

Query  237  ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  246  ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG  319

Query  311  AACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAA  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  320  AACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAA  393

Query  385  ATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTG  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  394  ATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTG  467

Query  459  GACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTA  532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  468  GACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTA  541

Query  533  TCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTAT  606
            |||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  542  TCCCAGT----GAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTAT  611

Query  607  TTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCAT  680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  612  TTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCAT  685

Query  681  TAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT  754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  686  TAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT  759

Query  755  GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTC  828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  760  GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTC  833

Query  829  CTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGA  902
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  834  CTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGA  907

Query  903  TGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAG-------------------------  951
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct  908  TGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAGAATGTCGTACTCTCAGGAGGCTCCA  981

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct  982  CCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGATTTGAAGAGAGTGGTGGATGCTAGGCTGAGGCTCAGC  1055

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1056  GAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTGTGGAGGTCCAGGTGGTCACGCATCACATGCAGCGCTA  1129

Query  952  -------------------------------------CCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACT  988
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct 1130  CGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACTCCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACT  1203

Query  989  ATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCC------------------  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct 1204  ATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCCTAGTGTCTGCCTGAACGC  1277

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1278  GTCGTTCGATGGTGTCACGTTGGGGAACAAGTGTCCTTCAGAACCCAGAGAAGGCCGCCGTTCTGTAAATAGCG  1351

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1352  ACGTCGGTGTTGCTGCCCAGCAGCGTGCTTGCATTGCCGGTGCATGAGGCGCGGCGCGGGCCCTTCAGTAAAAG  1425

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1426  CCATTTATCCGTGTGCCGACCGCTGTCTGCCAGCCTCCTCCTTCTCCCGCCCTCCTCACCCTCGCTCTCCCTCC  1499

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1500  TCCTCCTCCTCCGAGCTGCTAGCTGACAAATACAATTCTGAAGGAATCCAAATGTGACTTTGAAAATTGTTAGA  1573

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1574  GAAAACAACATTAGAAAATGGCGCAAAATCGTTAGGTCCCAGGAGAGAATGTGGGGGCGCAAACCCTTTTCCTC  1647

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1648  CCAGCCTATTTTTGTAAATAAAATGTTTAAACTTGAAATACAAATCGATGTTTATATTTCCTATCATTTTGTAT  1721

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1722  TTTATGGTATTTGGTACAACTGGCTGATACTAAGCACGAATAGATATTGATGTTATGGAGTGCTGTAATCCAAA  1795

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1796  GTTTTTAATTGTGAGGCATGTTCTGATATGTTTATAGGCAAACAAATAAAACAGCAAACTTTTTTGCCACATGT  1869

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1870  TTGCTAGAAAATGATTATACTTTATTGGAGTGACATGAAGTTTGAACACTAAACAGTAATGTATGAGAATTACT  1943

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1944  ACAGATACATGTATCTTTTAGTTTTTTTTGTTTGAACTTTCTGGAGCTGTTTTATAGAAGATGATGGTTTGTTG  2017

Query 1045  -----------------------------------------------------------------------  1044
                                                                                   
Sbjct 2018  TCGGTGAGTGTTGGATGAAATACTTCCTTGCACCATTGTAATAAAAGCTGTTAGAATATTTGTAAATATCT  2088

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