Nucleotide Global Alignment
Description
- Query:
- TRCN0000491519
- Subject:
- XR_001781537.1
- Aligned Length:
- 4143
- Identities:
- 1769
- Gaps:
- 2178
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCACCCCCTTAGCATATGTTAGTTACACATTTTAATGGGTTTCACTGTTACATTTTCATACGTGTGTGTAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TACTTGATCACCCATATTCCCCATAACTCTGGTTCCATCGTTCCCATAGCCTCCTTGTCTCCTTACATTGTCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGGTTTTTGTTTTGTTTTTTGTTTTGTTTTTGTGACCCACAGAGTTTAACTAGGTTTGCAAATAGGATCATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGAGGGTTAATTTACAGTATCACTAGCACCTTATCAATGGCTATACCATCAAAGAAAATGGCTTTCCTTCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCAGCAACCATTAGCTGCATGTATAGTCTCAACAATAGAGGACCAGAGGGAGGGAAGAGGTGATGTGGTGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCCTCCATATCTCAGGATTGCATGTTCACATATCCAATATGTGATAATCACTATATTTTATGCTGATAATCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATATCCCTAGAGTTTATGGGTTTGTTTGTTTGTTTGTTTGTTTTTAAGACAAACTTTCACTCTATAGCCTAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGGCCTGAAACTCACTATGAAGCCAGAGATGACCTTGAACTTCTGATCCTCTCACCTCCATCCCTGAGTGCTG 592
Query 1 -------------------------------------------ATGGCTTGCCTCCATGAGACCCGAACACCCT 31
|||||.|||||||||||.|||||||||||||
Sbjct 593 GGACTGCTGGGCCCGCTGCTCAGCACACCTGGCTCCAGAGGCCATGGCCTGCCTCCATGAAACCCGAACACCCT 666
Query 32 CTCCTTCCTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACACTTCTGAC 105
|.||||||||||||||||||||||||||.|||||||||||.||.|||||.||||||||.|||||||||||.|||
Sbjct 667 CCCCTTCCTTTGGGGGCTTTGTGTCTACTCTAAGTGAGGCTTCTATGCGAAAGCTGGATCCAGACACTTCAGAC 740
Query 106 TGCACTCCCGAGAAGGACCTGACGCCTACCCA------------------------------------------ 137
|||||.||||||||.|||||||||||.|||||
Sbjct 741 TGCACCCCCGAGAAAGACCTGACGCCCACCCAATGTGTACTTCGAGATGTTGTGCCTCTCGGTGGGCAGGGTGG 814
Query 138 ---------------------------------------------------------TGTCCTGCAGCTACATG 154
||||||.||||||||||
Sbjct 815 AGGAGGACCCAGCCCCTCCCCAGGTGGAGAGCCTCCCCCAGAGCCTTTTGCCAATAGTGTCCTCCAGCTACATG 888
Query 155 AGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACGAG 228
||||||||.||||.||.|||||||||||..|||||||||||||||||||.|||||.||||||||||||||.|||
Sbjct 889 AGCAGGATACAGGTGGGCCAGGGGGAGCCACTGGGTCACCTGAGAGTCGAGCATCTAGAGTTCGAGCTGATGAG 962
Query 229 GTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCCTCTTTGGCTGCCTGCGCCCTGTCTGGACCAT 302
||.||.||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||.||
Sbjct 963 GTACGTCTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAAGGTCTTTTTGGCTGCCTGCGCCCTGTCTGGACAAT 1036
Query 303 GATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGAGGTCCCCTTTGAGGAAATCC 376
|||||||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||||||||||||||||
Sbjct 1037 GATTGGCAAAGCCTACTCCACAGAACACAAGCAACAGCAGGAAGACCTTTGGGAAGTCCCCTTTGAGGAAATCC 1110
Query 377 TGGACCTGCAGTGGGTGGGCTCAGGGGCCCAGGGTGCTGTCTTCCTGGGGCGCTTCCACGGGGAGGAGGTGGCT 450
||||||||||||||||.|||||||||||.|||||||||||.||||||||.||||||||||||||||||||.|||
Sbjct 1111 TGGACCTGCAGTGGGTAGGCTCAGGGGCTCAGGGTGCTGTTTTCCTGGGACGCTTCCACGGGGAGGAGGTAGCT 1184
Query 451 GTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCA-CTTGCGAAAGCTGAAGCACCCCAACATCATCA 523
|||||||||||.|||||.|||||.||.||.||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1185 GTGAAGAAGGTTCGAGATCTCAAGGAGACTGACATCAAGCATCTT-CGAAAGCTGAAGCACCCCAACATCATCA 1257
Query 524 CTTTCAAGGGTGTGTGCACCCAGGCTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCCAGGGCCAGCTGTAT 597
|||||||||||||.|||||.|||||.|||||||||||||||||.|||||.||||||||.||.||.|||||.|||
Sbjct 1258 CTTTCAAGGGTGTTTGCACACAGGCCCCCTGCTACTGCATCCTTATGGAATTCTGCGCTCAAGGACAGCTATAT 1331
Query 598 GAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGGTTGACTGGTCCATGGGCATCGCTGGTGGCAT 671
|||||.||..|.||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1332 GAGGTGCTCAGAGCCGGCCGCCCTGTCACCCCCTCCTTGCTGGTTGACTGGTCCATGGGCATCGCTGGTGGCAT 1405
Query 672 GAACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGTCACCCAACATGCTAATCACCTACGACGATG 745
|||.|||||||||||||||||||||||||||||.||.||.|||||||||||||||||||||||.||||||||||
Sbjct 1406 GAATTACCTGCACCTGCACAAGATTATCCACAGAGACCTGAAGTCACCCAACATGCTAATCACATACGACGATG 1479
Query 746 TGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGGGACA 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1480 TGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGGAACA 1553
Query 820 GTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGAGAAGGTCGACATCTGGTCCTTTGGCGT 893
||||||||||||||.|||||.||||||.|.|||||||||||||||||||||||.|||||||||||||||||.||
Sbjct 1554 GTAGCCTGGATGGCTCCTGAAGTGATCAGAAATGAACCTGTGTCTGAGAAGGTTGACATCTGGTCCTTTGGGGT 1627
Query 894 GGTGCTATGGGAACTGCTGACTGGTGAGATCCCCTACAAAGACGTAGATTCCTCAGCCATTATCTGGGGTGTGG 967
|||||||||||||||.||||||||.|||||.|||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1628 GGTGCTATGGGAACTACTGACTGGAGAGATTCCCTACAAAGATGTAGATTCCTCAGCCATCATCTGGGGTGTGG 1701
Query 968 GAAGCAACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGG 1041
||||||||||||||||.|||||.||.||||||||.||||||||||||||.||.||.||.|||||||||||||||
Sbjct 1702 GAAGCAACAGTCTCCACCTGCCTGTACCCTCCAGCTGCCCAGATGGTTTTAAAATTCTACTTCGCCAGTGCTGG 1775
Query 1042 AATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGCTGCATCTGGACATTGCCTCAGCTGATGTACT 1115
||.||||||||||||||||||||||||||||||||||||.|||||||.||||||||.|||||.||||||||.||
Sbjct 1776 AACAGCAAACCACGAAATCGCCCATCATTCCGACAGATCTTGCTGCACCTGGACATCGCCTCCGCTGATGTGCT 1849
Query 1116 CTCCACACCCCAGGAGACTTACTTTAAGTCCCAGGCAGAGTGGCGGGAA-----------GAAGTAAAACTGCA 1178
|||.||||||||||||||||||||||||||||| ||.|||| |.||| ||
Sbjct 1850 CTCTACACCCCAGGAGACTTACTTTAAGTCCCA---------GCAGGAACCATTCATCATGGAGT-------CA 1907
Query 1179 CTTTGAAAAG------ATTAAGTCAGAAGGGA--CCTGTCTGCACCGCCT-AGAAGAGGAACTGGTGATGAGGA 1243
|...|||.|| .||..|.||.|||.|| ||.| || ||||| | .|||.|..|.||
Sbjct 1908 CAGAGAACAGGGTCCATTTCGGCCACAAGCGAACCCAG-CT-CACCG--TGGGAAAATCATCT----------- 1966
Query 1244 GGAGGGAGGAGC----TCAGACACGCCCTGGACATCAGGGAGCACTATGAAAGGAAGCTGGAGAGAGCCAACAA 1313
|| |||||||.|||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct 1967 ----------GCCCTTTCAGACATGCCCTGGACATCAGGGAGCACTATGAACGGAAGTTGGAGAGAGCCAACAA 2030
Query 1314 CCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAG 1387
||||||.||||||||.||||||||||||.||||.||.||||||||.||||||||..||||||||||||||||.|
Sbjct 2031 CCTGTACATGGAACTGAATGCCCTCATGCTGCAACTAGAACTCAAAGAGAGGGAATTGCTCAGGCGAGAGCAGG 2104
Query 1388 CTTTAGAGCGGAGGTGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAG 1461
|||||||..||.||||.||.||.||.||.|||.||||||||||.|||||||||||.|||||||||||.||||||
Sbjct 2105 CTTTAGAAAGGCGGTGTCCTGGTCTACTAAAGTCACACCCTTCTCGGGGCCTCCTACATGGAAACACTATGGAG 2178
Query 1462 AAGCTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCTCAAGACGGA 1535
|||||.||||||||.|||||.|||||||||||.|||||.|||||.|||||||||||||||||.||||||||.||
Sbjct 2179 AAGCTCATCAAGAAAAGGAACGTGCCACAGAAACTGTCGCCCCACAGCAAAAGGCCAGATATTCTCAAGACAGA 2252
Query 1536 GTCTTTGCTCCCTAAACTAGATGCAGCCCTGAGTGGGGTGGGGCTTCCTGGGTGTCCTAAGGGCCCCCCCTCAC 1609
|||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||
Sbjct 2253 GTCGTTGCTACCTAAACTAGATGCAGCCCTAAGTGGGGTGGGGCTTCCTGGGTGTCCTAAGGGCCCCCCTTCAC 2326
Query 1610 CAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGGACCTGCCTGGG 1683
|.|||.|||||||.||||||||||||||||||||.||||||||.||||||||.||||||||.||||||||||||
Sbjct 2327 CTGGAAGGAGTCGGCGTGGCAAGACCCGTCACCGAAAGGCCAGTGCCAAGGGCAGCTGTGGAGACCTGCCTGGG 2400
Query 1684 CTTCGTACAGCTGTGCCACCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGCCTAGGAGGGGGACCCTCAGC 1757
||||||.|||||.|||||||||||||.||||||||||.|||||||||||||||||||||||.|||.||.|||||
Sbjct 2401 CTTCGTGCAGCTTTGCCACCCCATGAGCCTGGAGGACTAGGAAGCCCAGGGGGCCTAGGAGTGGGCCCTTCAGC 2474
Query 1758 CTGGGAGGCCTGCCCTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCATCGTCCC 1831
.|||||.||.|||||.||.||.||||||||.||.||.||||||||.||.|||||.||.|||||.|||||.||||
Sbjct 2475 TTGGGATGCTTGCCCCCCTGCTCTCCGTGGACTCCACCATGACCTTCTACTCCGAAAGATGTCATCATCATCCC 2548
Query 1832 CAGACCTGCTGTCAGCAGCACTAGGGTCCCGGGGCCGGGGGGCCACAGGCGGAGCTGGGGATCCTGGCTCACCA 1905
||||||||||.||||||||.||.||..||||.|||||.|||||.|||||.||||||.|||||||||||||||||
Sbjct 2549 CAGACCTGCTATCAGCAGCGCTGGGAGCCCGAGGCCGAGGGGCTACAGGGGGAGCTCGGGATCCTGGCTCACCA 2622
Query 1906 CCTCCGGCCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTGGGGG 1979
|||||..|||.|||.||.||.||.|||||||||||.|||||.|||||.|||||||||||||||||.||||||||
Sbjct 2623 CCTCCACCCCAGGGCGATACTCCTCCAAGTGAGGGATCAGCTCCTGGTTCCACCAGCCCAGATTCGCCTGGGGG 2696
Query 1980 AGCCAAAGGGGAACCACCTCCTCC-------CCTC--------------------------------------- 2007
|||.|||||||||||.|||||.|| |||.
Sbjct 2697 AGCTAAAGGGGAACCCCCTCCACCAGTAGGGCCTGGAGAAGGTGTGGGGCTGCTGGGAACTGGAAGGGAAGGGA 2770
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 2771 CTGCAGGCCGGGGAGGAAACCGGGCTGGGTCCCAGCACTTGACCCCCGCTGCGCTGCTGTACAGGGCTGCTGTG 2844
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 2845 ACTCGAAGTCAGGTAAAGTATGGGGATGTTCTTCTACCCCACACCAAATTAAAATCCTTTAATCTCCTCATGGG 2918
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 2919 TCCAAGTGCTAACTATACCCCAACCCCACTCAACTATGTATCCTTGCCCAATTCTTAATGACTTACCATTTTTT 2992
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 2993 GACTGGTTTACTTACACCTACCCACACCCATCTCTACTGTAGAAACGTGGTATCTCATCTGAAGAAGAAGAAGG 3066
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3067 AGAGGTAGACAGTGAAGTAGAGCTACCCCCAAGTCAAAGGTGGCCTCAGGGCCCGAACATGCGTCAGTCACTAT 3140
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3141 CTACATTCAGCTCAGAGAACCCATCAGATGTGGAGGAAGGTACAGCTAGTGAGCCTTCCCCAAGTGGCACACCA 3214
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3215 GAAGTTGGCAGTACCAACACTGATGAGCGACCAGATGAACGATCTGATGACATGTGCTCACAGGGCTCAGAAAT 3288
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3289 TCCACTGGACCTACCTACTTCAGAGGTGGTCCCTGAACGTGAAGCCAGCTCCTTGCCCATGCAACACCAGGATG 3362
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3363 GCCAGGGCCCCAATCCTGAAGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCATTGATGCCTTG 3436
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3437 CGGCCCCCAGCCTCCCTTCCTCCATGAAAGACACTCTTATTCCTTGTACATAGAGAAATATTTATATAAATAAT 3510
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3511 ATATATGCGCCACATAATCAACAGATAGATGGGGCTTTCTTAGCCTTAAGCCAGGCTTGAGAGTGAACGACGCC 3584
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3585 CCTGACCAATTACCGAATAAGTTCTGGGGACACTGGCAGCTGTGGAAATGAATGACTCCGAGTACTACCCTAGA 3658
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3659 GCTATAAAGAAAGGAAGCTGGCCCCTTCTTGCTTCACCCCATTCCTTATGTTGAACAAGCAAGTAGGCAATAGA 3732
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3733 AAAGCCAGGCTTGTCTCTATACTGTCTATCCCTGAACACTGGAGGGGCAGGTAGAGGATTCACTTAAAACTGCA 3806
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3807 CTTTTATTTTCCGTTTACTGTTTACACATTTTGCACTTGGGAGGAGGGAAAGAAACTAAGGCTGGGTCATCCCT 3880
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3881 CTGAGGTTTCTCAGGTGGCAATGTAACTCATTTCTTTGTTCCTGTTTCTCTGCCCAAACCCTGGCTTTGGGCCA 3954
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 3955 GACGACTAACAGCATGTGATGGCTCAGGCTGAAGAACTGGGGTGCTGTTAGTCCCCACTGTTATCTTGGTGCCT 4028
Query 2008 ------------------------------------------------------------------------- 2007
Sbjct 4029 GGTAGGGGTGGGGACTGTCATATTGTAACCCCTGTGAACAACCTTGAAATATAACCACTCCATGCAGGCCCAA 4101
