Nucleotide Global Alignment

Description

Query:
TRCN0000491644
Subject:
NM_028966.3
Aligned Length:
1893
Identities:
1708
Gaps:
30

Alignment

Query    1  ---ATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGC  71
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGC  74

Query   72  GCTGCTGTCGCTGCTCAAGCGCGTGAGCCAGACCCAGGCCCGCTTCCTCCAGCTCTGCCTGGAGCACTCGCTGG  145
            .|||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct   75  ACTGCTGTCGCTGCTCAAGCGCGTAAGCCAGACCCAGGCCCGCTTCCTTCAGCTCTGCCTGGAGCACTCGCTGG  148

Query  146  CCGACTGCGCCGAGCTGCACGTCCTCGAACGCGAGGCCAACAGCCCCGGAATCATTAACCAATGGCAACAGGAA  219
            |||||||||||||||||||||||||.|||.|.||||||||||||||.|||||||||||||||||||||||||||
Sbjct  149  CCGACTGCGCCGAGCTGCACGTCCTGGAAGGAGAGGCCAACAGCCCGGGAATCATTAACCAATGGCAACAGGAA  222

Query  220  TCCAAGGATAAAGTGATTTCCCTCCTGTTAACTCATCTGCCTTTGTTGAAGCCAGGAAACCTCGACGCGAAAGT  293
            |||||||||||||||||||||||.|||.|||||||.|||||||||.|||||||||||||||||||||||||||.
Sbjct  223  TCCAAGGATAAAGTGATTTCCCTTCTGCTAACTCACCTGCCTTTGCTGAAGCCAGGAAACCTCGACGCGAAAGC  296

Query  294  AGAATATATGAAACTGCTGCCCAAAATCCTGGCTCACTCTATTGAACACAACCAGCACATTGAGGAGAGCAGGC  367
            |||.||||||||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct  297  AGAGTATATGAAACTGCTGCCCAAGATCCTGGCACACTCTATCGAACACAACCAGCACATTGAGGAGAGCAGGC  370

Query  368  AGCTGCTGTCCTATGCTTTGATACATCCAGCCACTTCGTTAGAAGACCGTAGTGCTTTAGCCATGTGGCTGAAT  441
            ||||||||||||||||||||||.||.|||||||||||.||.||||||||.||.||..|||||||||||||||||
Sbjct  371  AGCTGCTGTCCTATGCTTTGATCCACCCAGCCACTTCCTTGGAAGACCGCAGCGCACTAGCCATGTGGCTGAAT  444

Query  442  CACTTGGAGGACCGCACGTCGACCAGCTTTGGTGGCCAGAACCGAGGCCGCTCAGACTCTGTGGATTATGGACA  515
            |||||||||||||||||.||.||||||||||||.|||||||||||||||||||.||||||||||||||||||||
Sbjct  445  CACTTGGAGGACCGCACATCCACCAGCTTTGGTAGCCAGAACCGAGGCCGCTCGGACTCTGTGGATTATGGACA  518

Query  516  GACACACTACTATCACCAAAGACAGAACTCTGATGACAAGCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGA  589
            |||.||.||||||||||||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||||
Sbjct  519  GACGCATTACTATCACCAAAGACAGAACTCTGACGATAAGCTCAATGGCTGGCAGAACTCTCGGGATTCTGGGA  592

Query  590  TTTGCATCAATGCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGAGAATGGCCATGTGCCCCTCTACTCCTCC  663
            |||||||||.|||||||||||||||||||||.|||.||||.|||||||||||||||||||||||||||||.|||
Sbjct  593  TTTGCATCAGTGCCTCCAACTGGCAGGACAAGAGCCTGGGCTGTGAGAATGGCCATGTGCCCCTCTACTCTTCC  666

Query  664  TCATCTGTCCCCACCACAATCAATACGATTGGAACCAGCACAAGTACAAATGTTCCAGCCTGGCTGAAAAGCCT  737
            ||.||||||||..||||||||||.||||||||||||.||.||||.||.|||||||||||.|||.|.||||||||
Sbjct  667  TCGTCTGTCCCTGCCACAATCAACACGATTGGAACCGGCGCAAGCACGAATGTTCCAGCTTGGTTAAAAAGCCT  740

Query  738  CCGCCTGCACAAATATGCCGCGCTTTTCTCCCAGATGACCTATGAGGAGATGATGGCCCTCACCGAGTGCCAGC  811
            ||||||||||||.||.||.|||||.|||||.||||||||.||||||||.||||||||||||||.|||||.||.|
Sbjct  741  CCGCCTGCACAAGTACGCTGCGCTCTTCTCGCAGATGACTTATGAGGAAATGATGGCCCTCACTGAGTGTCAAC  814

Query  812  TGGAGGCGCAGAATGTTACCAAAGGTGCAAGACACAAAATTGTCATCAGTATTCAGAAGCTCAAAGAAAGACAA  885
            |||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||.
Sbjct  815  TGGAGGCTCAGAATGTTACCAAAGGCGCAAGACACAAAATTGTAATCAGTATTCAGAAGCTCAAAGAAAGACAG  888

Query  886  AATCTCCTGAAGTCTTTGGAAAGGGACATCATCGAGGGGGGCAGCCTGCGCATCCCGCTCCAGGAACTGCACCA  959
            ||.||||||||||||||||||||||||||||||||.||||||||||||||||.|||.||||||||.||.||.||
Sbjct  889  AACCTCCTGAAGTCTTTGGAAAGGGACATCATCGAAGGGGGCAGCCTGCGCACCCCCCTCCAGGAGCTACATCA  962

Query  960  GATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGG  1033
            ||||||||||||.||.|||||||||||||||||.||.||.||||||||.||||..|||.||||||         
Sbjct  963  GATGATCCTGACACCCATCAAGGCCTACAGCTCTCCCAGTACCACCCCTGAGGTGCGCTGCCGGG---------  1027

Query 1034  CCCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGC---CACT  1104
                     ||||||||||||||      |||||||..|||||.|||||||||||..|.||.|||||   |||.
Sbjct 1028  ---------AGCCCTCACTGATG------GAGAGCCCAAGCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACC  1086

Query 1105  GGCGCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGA  1178
            .|||||||.||||...||||.|||||.||||||||.||.||.||.||.|.||||||||||||||||||.||.||
Sbjct 1087  AGCGCCACAGCCAGTGCCTCAGCCGGTGCCAGCGGTGGACTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGA  1160

Query 1179  GCTGGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACAC  1252
            ||||||.||||||||.|||||.||||||||||||||.|||||||||||.||.||||||||||||||||||||||
Sbjct 1161  GCTGGCTGTCGCCCCTCTGCCGGAGGGGGACCTCCCGGGGCAGTTCACCCGAGTCATGGGGAAAGTGTGCACAC  1234

Query 1253  AGCTCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCAT  1326
            |||||||||||||||||||.|||||.|||||||||||.||||||.||||||||.|||||||||||||..|||||
Sbjct 1235  AGCTCTTGGTCTCCAGACCCGATGAAGAAAATATAAGCTCCTATCTACAGCTCTTAGACAAGTGTCTTGTTCAT  1308

Query 1327  GAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTT  1400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309  GAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTT  1382

Query 1401  CCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCC  1474
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1383  CCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCC  1456

Query 1475  TCCCGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAAC  1548
            ||||.||.||..|||||||||||.|.||||||||||||||||||||.||.||||||||||||.|.||||||||.
Sbjct 1457  TCCCAACAGCCAGCTCTGTGGGCAGCGGCATGGGCAGACGGAACCCACGACAGTACCAGATCGCATCTCGGAAT  1530

Query 1549  GTCCCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTAC  1622
            |||||||||||||||||.||.|||.||||||||||||||||.||||||||||||||||||.|||||.|.||.|.
Sbjct 1531  GTCCCTTCCGCCCGCCTTGGTCTCCTGGGCACCAGTGGATTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAA  1604

Query 1623  CCCCACCATCATGAAACAAGGAAGACAGAACCTGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCC  1696
            |||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||.||||
Sbjct 1605  CCCCACCATCATGAAACAAGGAAGACAGAACCTCTGGTTTGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCC  1678

Query 1697  GCACCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAG  1770
            |||||||||||||.|||||||.|||||||||||||||||||||.|||||||||||.||||||||||||||||||
Sbjct 1679  GCACCCACAGCTCCGTCCAGAAGACCCGCTCGCTGCCCGTGCATACTTCCCCACAAAACATGCTGATGTTCCAG  1752

Query 1771  CAGCCAGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATGAC  1844
            ||.||||||||.||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 1753  CAACCAGAATTTCAGCTTCCTGTGACTGAACCTGACATCAACAATAGGCTGGAGTCCTTGTGCCTCAGTATGAC  1826

Query 1845  CGAACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC  1887
            .||.||.||||||||||||||||||||||||||||||||.|||
Sbjct 1827  GGAGCATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAATC  1869

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