Nucleotide Global Alignment
Description
- Query:
- TRCN0000492210
- Subject:
- XR_377421.3
- Aligned Length:
- 2394
- Identities:
- 1291
- Gaps:
- 980
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGAAACCCACTCTAATTGAGGCGCTGGGATTCCTCACGTGAGACGTTGATTTGTAGTTTGAACACGTGGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCAAAAAGCCGGACACTCGGAGCGGCTGCCCCCGCCCCGCTCCCCTCGCCGCTGCCAGTCACCCCTCGGGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTTTTTTTTTACGGGGAGGCGGCGCCTGCCCCACGTAGTGTGATATTTTCACAGCCCGCTGGCCGCTGCCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGGTTGGGGAGGAAGAGACAAAAAGTAGTTTCCCCCCGCGCCTCCTCCTTTCTCTCGCTAATCCCGCCTCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCAGAGTTAGGAAGACTCGACGCTGGGCTCGTCGCTAGGCTTTTTCTTTCTCTCTTTTTTTTAATACCCAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGAAAAAGGACCCTGGGATCTGGTTTTCGCCCGCCGCTCCCGTGCTTGGGTCACTGTGTGGGTTTGAAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGAGGAGAGGAACAAAATCCACCGGCTCCATCCTCCGCCGTGGGTGCTTTTTTTAATTTAGCATTTTCCTCGG 518
Query 1 ------------------------ATGAACAAACTGTATATCGGAAACCTCAGCGAGAACGCCGCCCCCTCGGA 50
|||||||||.||||.|||||.|||||||||||..||||||.||||.||||
Sbjct 519 GTTTTAAAACGACCCCTTTTCACAATGAACAAATTGTACATCGGGAACCTCAGCGACCACGCCGGCCCCGCGGA 592
Query 51 CCTAGAAAGTATCTTCAAGGACGCCAAGATCCCGGTGTCGGGACCCTTCCTGGTGAAGACTGGCTACGCGTTCG 124
|||.||||||.|||||||||||||.||||||||||||.||||.|||||||||||||||||.|||||||||||||
Sbjct 593 CCTGGAAAGTGTCTTCAAGGACGCTAAGATCCCGGTGGCGGGCCCCTTCCTGGTGAAGACGGGCTACGCGTTCG 666
Query 125 TGGACTGCCCGGACGAGAGCTGGGCCCTCAAGGCCATCGAGGCGCTTTCAGGTAAAATAGAACTGCACGGGAAA 198
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|||||.||.||||||
Sbjct 667 TGGACTGCCCGGACGAGGGCTGGGCCCTCAAGGCCATCGAGGCGCTTTCAGGTAAAATGGAACTACATGGGAAA 740
Query 199 CCCATAGAAGTTGAGCACTCGGTCCCAAAAAGGCAAAGGATTCGGAAACTTCAGATACGAAATATCCCGCCTCA 272
||.||.||||||||||||||||||||.|||.||||.||||||||.||||||||||||||||||||||||||.||
Sbjct 741 CCGATGGAAGTTGAGCACTCGGTCCCTAAACGGCAGAGGATTCGTAAACTTCAGATACGAAATATCCCGCCCCA 814
Query 273 TTTACAGTGGGAGGTGCTGGATAGTTTACTAGTCCAGTATGGAGTGGTGGAGAGCTGTGAGCAAGTGAACACTG 346
.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 815 CTTACAATGGGAGGTGCTGGATAGTTTACTAGTCCAGTATGGAGTGGTGGAGAGCTGTGAGCAAGTGAACACGG 888
Query 347 ACTCGGAAACTGCAGTTGTAAATGTAACCTATTCCAGTAAGGACCAAGCTAGACAAGCACTAGACAAACTGAAT 420
|.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||..||||||||||||||
Sbjct 889 ATTCGGAAACGGCAGTTGTAAATGTAACCTATTCCAGTAAGGACCAAGCTAGACAAGCCTTAGACAAACTGAAT 962
Query 421 GGATTTCAGTTAGAGAATTTCACCTTGAAAGTAGCCTATATCCCTGATGAAATGGCCGCCCAGCAAAACCCCTT 494
|||||.|||||||||||.|||||||||||.||.|||||.|||||.|||||||..||.|||||||||||.||||.
Sbjct 963 GGATTCCAGTTAGAGAACTTCACCTTGAAGGTTGCCTACATCCCAGATGAAACTGCTGCCCAGCAAAATCCCTC 1036
Query 495 GCAGCAGCCCCGAGGTCGCCGGGGGCTTGGGCAGAGGGGCTCCTCAAGGCAGGGGTCTCCAGGATCCGTATCCA 568
||..||||.|||.||.||||||||||..||||||.|||||||.||.|||||||.||||||||||||.||.||||
Sbjct 1037 GCCACAGCTCCGGGGGCGCCGGGGGCCAGGGCAGCGGGGCTCATCCAGGCAGGCGTCTCCAGGATCGGTGTCCA 1110
Query 569 AGCAGAAACCATGTGATTTGCCTCTGCGCCTGCTGGTTCCCACCCAATTTGTTGGAGCCATCATAGGAAAAGAA 642
||||||||||.|||||..||||.|||||||||||||||||||||||.||||||||||||||.||||||||||||
Sbjct 1111 AGCAGAAACCCTGTGACCTGCCACTGCGCCTGCTGGTTCCCACCCAGTTTGTTGGAGCCATTATAGGAAAAGAA 1184
Query 643 GGTGCCACCATTCGGAACATCACCAAACAGACCCAGTCTAAAATCGATGTCCACCGTAAAGAAAATGCGGGGGC 716
|||||.||||||||.||||||||.||.||||||||||||||||||||||||||.|||||.||.|||.|.|||||
Sbjct 1185 GGTGCTACCATTCGCAACATCACAAAGCAGACCCAGTCTAAAATCGATGTCCATCGTAAGGAGAATACAGGGGC 1258
Query 717 TGCTGAGAAGTCGATTACTATCCTCTCTACTCCTGAAGGCACCTCTGCGGCTTGTAAGTCTATTCTGGAGATTA 790
.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1259 CGCGGAGAAGTCCATTACTATCCTCTCTACCCCTGAAGGCACCTCTGCAGCTTGTAAGTCTATTCTGGAGATTA 1332
Query 791 TGCATAAGGAAGCTCAAGATATAAAATTCACAGAAGAGATCCCCTTGAAGATTTTAGCTCATAATAACTTTGTT 864
||||||||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||.|||||||||||.
Sbjct 1333 TGCATAAGGAAGCTCAAGATATAAAATTCACAGAGGAGATTCCCTTGAAGATCTTAGCTCACAATAACTTTGTA 1406
Query 865 GGACGTCTTATTGGTAAAGAAGGAAGAAATCTTAAAAAAATTGAGCAAGACACAGACACTAAAATCACGATATC 938
||.|||||.||||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||.|||||
Sbjct 1407 GGCCGTCTCATTGGTAAAGAAGGAAGAAACCTTAAAAAAATCGAGCAAGACACGGACACTAAAATCACAATATC 1480
Query 939 TCCATTGCAGGAATTGACGCTGTATAATCCAGAACGCACTATTACAGTTAAAGGCAATGTTGAGACATGTGCCA 1012
|||||||||||||.||||||||||.|||||.||||||||.||||||||.|||||||.|||||||||.|||||||
Sbjct 1481 TCCATTGCAGGAACTGACGCTGTACAATCCGGAACGCACCATTACAGTGAAAGGCAGTGTTGAGACGTGTGCCA 1554
Query 1013 AAGCTGAGGAGGAGATCATGAAGAAAATCAGGGAGTCTTATGAAAATGATATTGCTTCTATGAATCTTCAAGCA 1086
|.||.||||||||.||.||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1555 AGGCGGAGGAGGAAATAATGAAGAAGATCAGGGAGTCTTATGAAAATGATATTGCTTCCATGAATCTTCAAGCA 1628
Query 1087 CATTTAATTCCTGGATTAAATCTGAACGCCTTGGGTCTGTTCCCACCCACTTCAGGGATGCCACCTCCCACCTC 1160
||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1629 CATTTAATCCCTGGATTAAATCTGAATGCCTTGGGTCTGTTCCCACCCACGTCAGGGATGCCACCTCCCACCTC 1702
Query 1161 AGGGCCCCCTTCAGCCATGACTCCTCCCTACCCGCAGTTTGAGCAATCAGAAACGGAGACTGTTCATCTGTTTA 1234
|||||||||||||.||.||||||||||||||||.||.||||||||||||||.|||||||||||.||||||||||
Sbjct 1703 AGGGCCCCCTTCAACCCTGACTCCTCCCTACCCACAATTTGAGCAATCAGAGACGGAGACTGTGCATCTGTTTA 1776
Query 1235 TCCCAGCTCTATCAGTCGGTGCCATCATCGGCAAGCAGGGCCAGCACATCAAGCAGCTTTCTCGCTTTGCTGGA 1308
|.||.||.||.||.||.||.||||||||.||||||||||||||.||||||||.|||||||||||||||||.|||
Sbjct 1777 TTCCCGCCCTGTCCGTTGGCGCCATCATTGGCAAGCAGGGCCAACACATCAAACAGCTTTCTCGCTTTGCGGGA 1850
Query 1309 GCTTCAATTA---------------------------------------------------------------- 1318
|||||.||||
Sbjct 1851 GCTTCGATTAAGAAGGCATTTAATTCTGCAGCTCAGTCAATCATGTGCAGATGTCAGGCTGGTTTGCCTAAGGT 1924
Query 1319 ---------------------------------------------------AGATTGCTCCAGCAGAAGCACCA 1341
||||.||||||||.|||||||||
Sbjct 1925 TTGTCAGTGACACCCGAAAGTATCATAACTGGCTGGTGATGGGTCTATTACAGATCGCTCCAGCCGAAGCACCA 1998
Query 1342 GATGCTAAAGTGAGGATGGTGATTATCACTGGACCACCAGAGGCTCAGTTCAAGGCTCAGGGAAGAATTTATGG 1415
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GATGCTAAAGTGCGGATGGTGATTATCACTGGACCACCAGAGGCTCAGTTCAAGGCTCAGGGAAGAATTTATG- 2071
Query 1416 AAAAATTAAAGAAGAAAACTTTGTTAGTCCTAAAGAAGAGGTGAAACTTGAAGCTCATATCAGAGTGCCATCCT 1489
Sbjct 2072 -------------------------------------------------------------------------- 2071
Query 1490 TTGCTGCTGGCAGAGTTATTGGAAAAGGAGGCAAAACGGTGAATGAACTTCAGAATTTGTCAAGTGCAGAAGTT 1563
Sbjct 2072 -------------------------------------------------------------------------- 2071
Query 1564 GTTGTCCCTCGTGACCAGACACCTGATGAGAATGACCAAGTGGTTGTCAAAATAACTGGTCACTTCTATGCTTG 1637
Sbjct 2072 -------------------------------------------------------------------------- 2071
Query 1638 CCAGGTTGCCCAGAGAAAAATTCAGGAAATTCTGACTCAGGTAAAGCAGCACCAACAACAGAAGGCTCTGCAAA 1711
Sbjct 2072 -------------------------------------------------------------------------- 2071
Query 1712 GTGGACCACCTCAGTCAAGACGGAAG 1737
Sbjct 2072 -------------------------- 2071
