Nucleotide Global Alignment
Description
- Query:
- TRCN0000492319
- Subject:
- XR_002957830.1
- Aligned Length:
- 3939
- Identities:
- 1069
- Gaps:
- 2829
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTCACCGCCGCTTCCGGTCCGCGTGAGGTGCATTCTCGCGCCGGTGGCGAGGTTAGGGCCCGCGTTGCGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGTGCAGCGCATATTTTCACAAGTGGGTCTCCCTTGTCCGGGACTATGGCCACCGACTCGTGGGCCCTGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGACGAGCAGGAAGCGGCTGTCAAGTCGATGACCAATTTGCAGATCAAGGAAGAGAAAGTCAAAGCAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAATGGTATTATCAAAACCAGTACCACTGCCGAGAAAACAGATGAAGAGGAGAAAGAGGACAGAGCTGCCCAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTTACTCAACAAGCTGATCAGAAGCAACCTTGTTGATAACACAAACCAAGTGGAAGTCCTGCAACGGGATCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACTCCCCTCTGTACTCGGTGAAGTCGTTTGAAGAGCTTCGGCTGAAACCACAGCTTCTCCAGGGAGTCTATGC 444
Query 1 -ATGGGTTTCAATCGTCCATCCAAGATACAAGAGAACGCATTGCCACTGATGCTTGCTGAGCCCCCACAGAACT 73
|||||.||||||||.||.|||||||||||||||||||||||.||..|||||||||||||.|||||||||||..
Sbjct 445 CATGGGCTTCAATCGACCCTCCAAGATACAAGAGAACGCATTACCCATGATGCTTGCTGAACCCCCACAGAATC 518
Query 74 TAATTGCCCAATCTCAGTCTGGTACTGGTAAAACAGCTGCCTTCGTGCTGGCCATGCTTAGCCAAGTAGAACCT 147
|.||||||||.|||||||||||.||||||||||||||||||||.||..|.||||||||.||||.|||.||.||.
Sbjct 519 TGATTGCCCAGTCTCAGTCTGGCACTGGTAAAACAGCTGCCTTTGTCTTAGCCATGCTCAGCCGAGTGGAGCCA 592
Query 148 GCAAACAAATACCCCCAGTGTCTATGTCTCTCCCCAACGTATGAGCTCGCCCTCCAAACAGGAAAAGTGATTGA 221
.||.|||.|||||||||||||||.||.|||||||||||.||||||||.||.||.||||||||||||||||||||
Sbjct 593 TCAGACAGATACCCCCAGTGTCTGTGCCTCTCCCCAACATATGAGCTGGCGCTTCAAACAGGAAAAGTGATTGA 666
Query 222 ACAAATGGGCAAATTTTACCCTGAACTGAAGCTAGCTTATGCTGTTCGAGGCAATAAATTGGAAAGAGGCCAGA 295
.||.|||||||||||||||||.|||||||||||.||.|||||.|||||||||||||||||||||||||||||||
Sbjct 667 GCAGATGGGCAAATTTTACCCAGAACTGAAGCTTGCCTATGCCGTTCGAGGCAATAAATTGGAAAGAGGCCAGA 740
Query 296 AGATCAGTGAGCAGATTGTCATTGGCACCCCTGGGACTGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGAT 369
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATCAGTGAGCAGATTGTCATTGGCACCCCTGGGACCGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGAT 814
Query 370 CCCAAGAAAATCAAGGTGTTTGTTCTGGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAG 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCAAGAAAATCAAGGTGTTTGTTCTGGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAG 888
Query 444 CATCCGCATCCAGAGGATGCTGCCCAGGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGT 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CATCCGCATCCAGAGGATGCTGCCCAGGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGT 962
Query 518 GGAAGTTTGCCCAGAAAGTGGTCCCAGACCCAAACGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGACACC 591
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||
Sbjct 963 GGAAGTTTGCCCAGAAAGTGGTCCCAGACCCAAATGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGATACC 1036
Query 592 ATCAAGCAGTACTATGTCCTGTGCAGCAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCAT 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCAAGCAGTACTATGTCCTGTGCAGCAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCAT 1110
Query 666 CACCATTGCTCAAGCCATGATCTTCTGCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAG 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CACCATTGCTCAAGCCATGATCTTCTGCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAG 1184
Query 740 AAGGCCACCAGGTGGCTCTGCTGAGTGGGGAGATGATGGTGGAACAGAGGGCTGCAGTGATTGAGCGCTTCCGA 813
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||
Sbjct 1185 AAGGCCACCAGGTGGCTCTGCTGAGTGGGGAGATGATGGTGGAGCAGAGGGCTGCGGTGATTGAGCGCTTCCGA 1258
Query 814 GAGGGCAAAGAGAAGGTTTTGGTGACCACCAACGTGTGTGCCCGC----------------------------- 858
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGGGCAAAGAGAAGGTTTTGGTGACCACCAACGTGTGTGCCCGCGGTGAGCAGAGGACGTGTCCCACCTGGTC 1332
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1333 TGCCAGGCTCGGGGTCCCAGGCCCAATTAGAGCCAGAAATCCTTGTATACAGGGAAGTCGGATGGTCTCAGGGA 1406
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1407 GATGGGTGGGGTTGGTGACACTATTCCTTTCTAGGAGAGACTGTTTGGATTTCCCTGAGGTGGTAAGAACTCAC 1480
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1481 ACATGCCAGGTGCGGTGGCTCATGCCTGCAATCCCAAGGCAGGAAAATTGCTTGAACCCTGGAGACAGAGGTTG 1554
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1555 CAGTGAGCCGAGAATGTGCTATAGCACTCCATCCTGGGTGACAGAGTGAGACTCTGTCTCCAAAAAAAAAAAGG 1628
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1629 AAGAGGGCAGGCCCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGAATCACCTGAGG 1702
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1703 TCAGGAATTCGAGACCAGCCTGACCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCG 1776
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1777 TGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGTGGAG 1850
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1851 GTTACGGTGAGTGAGATCGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAATAAAA 1924
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1925 AAAGAAAGAAAGAAAAGGAACTCCCGCAGAAACCAGTAGTCCTGACTTGGTGGAAGGAAATGTACAGGCATCTG 1998
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1999 ACTGGTAGAGAACGGAGCCTACTCTTCCAGGGGCGCCCATCTCCAGAACATTGTGTCTCCCAGAGGATTACCGA 2072
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2073 CTGATCTCATGATTTTGTTGGCACTTGCCAAAGTTCTCTTCTTTTCCTCTGGGTTCTGTTGCCTGCCTATATGT 2146
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2147 GTGCCCTCTCTTGTACCCAGAGTTGGCCTGTCCCAAATTCTTTCCCTCTATCCCAAAGTTGGTACGCATTGACC 2220
Query 859 ---------------------------------------------------------------------GGCAT 863
|||||
Sbjct 2221 TACCTATGGATGACAGTGATTTCTGTCTCCTGTCCTTAGTCCTCTCAGCCTCCAACTCTCCTTCCTGCAGGCAT 2294
Query 864 TGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACAAGGACGGGAATCCTGACAATGAGA 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACAAGGACGGGAATCCTGACAATGAGA 2368
Query 938 CCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTGGCAGTGAACATGGTGGACAGCAAG 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTGGCAGTGAACATGGTGGACAGCAAG 2442
Query 1012 CACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGATAGAAAGATTGGACACAGATGATTT 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGATAGAAAGATTGGACACAGATGATTT 2516
Query 1086 GGACGAGATTGAGAAAATAGCCAAC------------------------------------------------- 1110
|||||||||||||||||||||||||
Sbjct 2517 GGACGAGATTGAGAAAATAGCCAACTGAGAAGCTCCACCAGCCACTGATGCCAGCCCTGGCACTGCCCCTGCAC 2590
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2591 AGGAGACAAGTGCATTTAGGGCACAGGCCCCGACATCACCCCAAGGACAACGGCAGAAGTAGAGAGAAACTACC 2664
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2665 TACCTCACTTCAAATTATGTTTGGACTTGACAAAAATAGGTGCAAATGATGGGGGGCAATAGAAGAAAAAATTT 2738
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2739 GCATTTTGGAAAATTGGGTCCTTTCCCCACTTTTTTAAAGCCACATTCCCCCATCTTTATAATAATCTGGTCAC 2812
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2813 AGTGGTAGTCGCTGGCCCCAGGACCCCCTCCTGATTTTGGCTAGGCATCGTGGAACCAGCTCCAGCCCCTGAAG 2886
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2887 AAACGATAGATGTGCAGGTTGTGCGGAAGAGGCTGAGTGGAAAATGGTGTGAGCCCCACCGCTGTGCATCGAAT 2960
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 2961 GAGGGAAGTGGCAGCAGAGAGGCCAGAGCTGCCCCCTCTCTGTCTCTTCAATGGACCCTTCACAAGTGTTTCTC 3034
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3035 CTGCCCTTGGGGCTGTCTTCCTTCTCCTGAAATCCAGAGACTTTCTTGCTCATCCCTTCTCCCTTTCACTTCTG 3108
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3109 TTCTCTGCTGCAGAAAGCAGACTTGCATATCCCTGATGAGCAGCTCGGCTACTTTTGTAAACTTCAGATTTGGA 3182
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3183 GAGAAACACGAAAGTCTGAATCCTGACCCCTTGAGAGAGAGTGATCTGGCGAGGGCCGATGAAGGGGCTGGGCC 3256
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3257 TGGTCTTGCCTTCTCTTCTCTCGGTTGCTCCCTCTGCCTAGGCCCCTGGTACTCAGTCACGGCAGCCAGGAGAC 3330
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3331 CCCAGGTGAGTTTCTGAGCGCATACGTAGTTGGTTCTTACCCCCAGGTGTCACACGGGGCCGAGAGCTGAGCAA 3404
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3405 GAATTTGGAATGGAAGTTATGACCAAGGGAATTATGCTGTTCATTTATAATAGTGGACATTATGGAGAGCTCTG 3478
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3479 ATTCCTACATAATATGAATAAGGATGGATAGGCCGGGCGTGGTGGCTCATGCCTATAATCCCAGCACGTTGGGA 3552
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3553 GGCTGAGGCGGGCGGATCGGTTGAGCTCAGGCGTTCGGGACCAGCCTGGCCAACATGATGAAACCCCGTCTCTA 3626
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3627 CCAAAAATAGAAAAAAATATAGCCGGGCCTGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTA 3700
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3701 GGAGGATCGCTTGAGCCTGGGTAGAGGCTGCTGTGAGCTGAAATGGCGCCACTGCACTCCAGCCTGGGTAACAG 3774
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3775 AGCGAGACCCCGACTCAATAAATAAATAAGGATGGATAAATTGTAGCGTATGCACCATTCATTATGCTAAGACA 3848
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 3849 TTTTAAAGTAATTATGAGAAACGCTCTACTAATGATTTGTTTTTATTTGTATTTTTCTGCTTATTAGACAAATA 3922
Query 1111 ----------------- 1110
Sbjct 3923 TATACTCATTTTAAAAA 3939
