Nucleotide Global Alignment
Description
- Query:
- TRCN0000492327
- Subject:
- XM_006521795.3
- Aligned Length:
- 4392
- Identities:
- 1930
- Gaps:
- 2220
Alignment
Query 1 ATGGGCAGAGTGGGCTATTGGACCCTGCTGGTGCTGCCGGCCCTTCTGGTCTGGCGCGGTCCGGCGCCGAGCGC 74
|||||||||.|||||||.||||||.|||||||..|||||||||||||||||||||.|||||||||||.||.|||
Sbjct 1 ATGGGCAGACTGGGCTACTGGACCTTGCTGGTATTGCCGGCCCTTCTGGTCTGGCACGGTCCGGCGCAGAACGC 74
Query 75 GGCGGCGGAGAAGGGTCCCCCCGCGCTAAATATTGCGGTGATGCTGGGTCACAGCCACGACGTGACAGAGCGCG 148
||||||||||||||||.|.||.|||||.||.|||||||||.||||||||||||||||||||||||||||.||||
Sbjct 75 GGCGGCGGAGAAGGGTACTCCAGCGCTGAACATTGCGGTGCTGCTGGGTCACAGCCACGACGTGACAGAACGCG 148
Query 149 AACTTCGAACACTGTGGGGCCCCGAGCAGGCGGCGGGGCTGCCCCTGGACGTGAACGTGGTAGCTCTGCTGATG 222
|||||||||..|||||||||||.||||||||..|.||..||||||||||.|||||||||||.||..|..|||||
Sbjct 149 AACTTCGAAATCTGTGGGGCCCGGAGCAGGCAACCGGCTTGCCCCTGGATGTGAACGTGGTGGCGTTATTGATG 222
Query 223 AACCGCACCGACCCCAAGAGCCTCATCACGCACGTGTGCGACCTCATGTCCGGGGCACGCATCCACGGCCTCGT 296
||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||.||||||||.|||.|.||
Sbjct 223 AACCGCACTGACCCTAAGAGCCTCATCACGCATGTGTGCGACCTCATGTCCGGGGCGCGCATCCATGGCTTGGT 296
Query 297 GTTTGGGGACGACACGGACCAGGAGGCCGTAGCCCAGATGCTGGATTTTATCTCCTCCCACACCTTCGTCCCCA 370
||||||.||.||.||||||||.|||||.||.||.|||||||||||||||||||||||.||.||.|||.||||||
Sbjct 297 GTTTGGAGATGATACGGACCAAGAGGCTGTGGCTCAGATGCTGGATTTTATCTCCTCACAGACTTTCATCCCCA 370
Query 371 TCTTGGGCATTCATGGGGGCGCATCTATGATCATGGCTGACAAGGATCCGACGTCTACCTTCTTCCAGTTTGGA 444
|||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||||||
Sbjct 371 TCTTGGGCATTCATGGGGGTGCATCTATGATCATGGCTGACAAGGATCCGACATCCACGTTCTTCCAGTTTGGA 444
Query 445 GCGTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGATCATGCAGGATTATGACTGGCATGTCTTCTCCCTGGT 518
||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||.||||
Sbjct 445 GCTTCCATCCAGCAGCAAGCCACGGTCATGCTGAAGATCATGCAGGACTATGACTGGCATGTCTTCTCCTTGGT 518
Query 519 GACCACTATCTTCCCTGGCTACAGGGAATTCATCAGCTTCGTCAAGACCACAGTGGACAACAGCTTTGTGGGCT 592
.|||||.|||||||||||||||||.||.||||||||||||.|||||||.|||||||||||||||||||||||||
Sbjct 519 CACCACCATCTTCCCTGGCTACAGAGACTTCATCAGCTTCATCAAGACAACAGTGGACAACAGCTTTGTGGGCT 592
Query 593 GGGACATGCAGAATGTGATCACACTGGACACTTCCTTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAGATC 666
||||.||||||||.|||||||||||||||||.||.||||||||.||.||||||||.||||||||||||||||||
Sbjct 593 GGGATATGCAGAACGTGATCACACTGGACACCTCTTTTGAGGACGCCAAGACACAGGTCCAGCTGAAGAAGATC 666
Query 667 CACTCTTCTGTCATCTTGCTCTACTGTTCCAAAGACGAGGCTGTTCTCATTCTGAGTGAGGCCCGCTCCCTTGG 740
|||||.|||||||||.||||||||||.|||||.||.||||||||.|||||.|||||.|||||.|||||.|||||
Sbjct 667 CACTCCTCTGTCATCCTGCTCTACTGCTCCAAGGATGAGGCTGTCCTCATCCTGAGCGAGGCTCGCTCTCTTGG 740
Query 741 CCTCACCGGGTATGATTTCTTCTGGATTGTCCCCAGCTTGGTCTCTGGGAACACGGAGCTCATCCCAAAAGAGT 814
|||||||||.||.|||||||||||||||||||||||.||||||||.||||||||.|||||||||||.|||||||
Sbjct 741 CCTCACCGGCTACGATTTCTTCTGGATTGTCCCCAGTTTGGTCTCCGGGAACACAGAGCTCATCCCCAAAGAGT 814
Query 815 TTCCATCGGGACTCATTTCTGTCTCCTACGATGACTGGGACTACAGCCTGGAGGCGAGAGTGAGGGACGGCATT 888
||||||||||.||||||||.|||||.|||||.||||||||||||||.||||||||.||||||||.|||||..||
Sbjct 815 TTCCATCGGGTCTCATTTCAGTCTCTTACGACGACTGGGACTACAGTCTGGAGGCAAGAGTGAGAGACGGTCTT 888
Query 889 GGCATCCTAACCACCGCTGCATCTTCTATGCTGGAGAAGTTCTCCTACATCCCCGAGGCCAAGGCCAGCTGCTA 962
||.|||.|||||||.||.||||||||.|||.|||||||.|||||||||||.|||||||||||||||||||||||
Sbjct 889 GGGATCTTAACCACTGCCGCATCTTCCATGTTGGAGAAATTCTCCTACATTCCCGAGGCCAAGGCCAGCTGCTA 962
Query 963 CGGGCAGATGGAGAGGCCAGAGGTCCCGATGCACACCTTGCACCCATTTATGGTCAATGTTACATGGGATGGCA 1036
||||||||..||||.|||.|||..||||.|.|||||..||||||.|||||||||||||||.||.||||||||||
Sbjct 963 CGGGCAGACAGAGAAGCCGGAGACCCCGCTACACACTCTGCACCAATTTATGGTCAATGTGACTTGGGATGGCA 1036
Query 1037 AAGACTTATCCTTCACTGAGGAAGGCTACCAGGTGCACCCCAGGCTGGTGGTGATTGTGCTGAACAAAGACCGG 1110
|.|||||.||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||.||.||||||
Sbjct 1037 AGGACTTGTCCTTCACTGAGGAAGGCTATCAGGTGCACCCCAGGCTTGTGGTGATCGTGCTGAATAAGGACCGG 1110
Query 1111 GAATGGGAAAAGGTGGGCAAGTGGGAGAACCATACGCTGAGCCTGAGGCACGCCGTGTGGCCCAGGTACAAGTC 1184
|||||||||||||||||||||||||||||.||.||.|||||||||.||||.||.||||||||.|||||.|||||
Sbjct 1111 GAATGGGAAAAGGTGGGCAAGTGGGAGAATCAGACTCTGAGCCTGCGGCATGCTGTGTGGCCAAGGTATAAGTC 1184
Query 1185 CTTCTCCGACTGTGAGCCGGATGACAACCATCTCAGCATCGTCACCCTGGAGGAGGCCCCATTCGTCATCGTGG 1258
|||.||.|||||||||||.|||||||||||.||||||||.||||||.|||||||.|||||.|||||||||||.|
Sbjct 1185 CTTTTCTGACTGTGAGCCAGATGACAACCACCTCAGCATTGTCACCTTGGAGGAAGCCCCCTTCGTCATCGTAG 1258
Query 1259 AAGACATAGACCCCCTGACCGAGACGTGTGTGAGGAACACCGTGCCATGTCGGAAGTTCGTCAAAATCAACAAT 1332
|||||||||||||.|||||.|||||.||.||.||||||||.||.||.|||||||||||.|||||.|||||||||
Sbjct 1259 AAGACATAGACCCACTGACTGAGACCTGCGTCAGGAACACGGTACCCTGTCGGAAGTTTGTCAAGATCAACAAT 1332
Query 1333 TCAACCAATGAGGGGATGAATGTGAAGAAATGCTGCAAGGGGTTCTGCATTGATATTCTGAAGAAGCTTTCCAG 1406
||||||||.||.|||||||||||||||||.||||||||||||||||||||.||.||.||.|||||.||.|||||
Sbjct 1333 TCAACCAACGAAGGGATGAATGTGAAGAAGTGCTGCAAGGGGTTCTGCATCGACATCCTTAAGAAACTGTCCAG 1406
Query 1407 AACTGTGAAGTTTACTTACGACCTCTATCTGGTGACCAATGGGAAGCATGGCAAGAAAGTTAACAATGTGTGGA 1480
||||||.|||||.||.||.||||||||.|||||||||||||||||||||||.||.||.||||||||||||||||
Sbjct 1407 AACTGTAAAGTTCACCTATGACCTCTACCTGGTGACCAATGGGAAGCATGGGAAAAAGGTTAACAATGTGTGGA 1480
Query 1481 ATGGAATGATCGGTGAAGTGGTCTATCAACGGGCAGTCATGGCAGTTGGCTCGCTCACCATCAATGAGGAACGT 1554
||||||||||.||.|||||||||||||||||.|||||.|||||.||.|||||.|||||||||||||||||.|||
Sbjct 1481 ATGGAATGATAGGCGAAGTGGTCTATCAACGAGCAGTTATGGCCGTGGGCTCCCTCACCATCAATGAGGAGCGT 1554
Query 1555 TCTGAAGTGGTGGACTTCTCTGTGCCCTTTGTGGAAACGGGAATCAGTGTCATGGTTTCAAGAAGTAATGGCAC 1628
||.|||||||||||||||||.||||||||||||||.||.|||||||||||||||||.||.||.|||||||||||
Sbjct 1555 TCAGAAGTGGTGGACTTCTCCGTGCCCTTTGTGGAGACAGGAATCAGTGTCATGGTCTCCAGGAGTAATGGCAC 1628
Query 1629 CGTCTCACCTTCTGCTTTTCTAGAACCATTCAGCGCCTCTGTCTGGGTGATGATGTTTGTGATGCTGCTCATTG 1702
.||.||.|||||||||||.||.|||||.|||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1629 TGTTTCCCCTTCTGCTTTCCTTGAACCCTTCAGCGCCTCTGTCTGGGTGATGATGTTCGTGATGCTGCTCATTG 1702
Query 1703 TTTCTGCCATAGCTGTTTTTGTCTTTGAATACTTCAGCCCTGTTGGATACAACAGAAACTTAGCCAAAGGGAAA 1776
|.||||||||.|||||.||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCTCTGCCATTGCTGTCTTCGTTTTTGAATACTTCAGTCCTGTTGGATACAACAGAAACTTAGCCAAAGGGAAA 1776
Query 1777 GCACCCCATGGGCCTTCTTTTACAATTGGAAAAGCTATATGGCTTCTTTGGGGCCTGGTGTTCAATAACTCCGT 1850
||.||||||||||||||||||||.||||||||||||||||||||.||.|||||||||||.|||||.||.||.||
Sbjct 1777 GCTCCCCATGGGCCTTCTTTTACCATTGGAAAAGCTATATGGCTCCTCTGGGGCCTGGTCTTCAACAATTCTGT 1850
Query 1851 GCCTGTCCAGAATCCTAAAGGGACCACCAGCAAGATCATGGTATCTGTATGGGCCTTCTTCGCTGTCATATTCC 1924
|||.|||||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||.||.|||||.||||
Sbjct 1851 GCCCGTCCAGAATCCTAAAGGCACAACCAGCAAGATAATGGTATCAGTGTGGGCCTTCTTTGCCGTCATCTTCC 1924
Query 1925 TGGCTAGCTACACAGCCAATCTGGCTGCCTTCATGATCCAAGAGGAATTTGTGGACCAAGTGACCGGCCTCAGT 1998
|.||.||.|||||||||||.||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||
Sbjct 1925 TTGCAAGTTACACAGCCAACCTGGCTGCCTTCATGATCCAGGAGGAGTTTGTGGACCAAGTGACTGGCCTCAGT 1998
Query 1999 GACAAAAAGTTTCAGAGACCTCATGACTATTCCCCACCTTTTCGATTTGGGACAGTGCCTAATGGAAGCACGGA 2072
|||||.|||||.||||||||||||||||||||.||.|||||.||||||||||||||.||.||||||||.||.||
Sbjct 1999 GACAAGAAGTTCCAGAGACCTCATGACTATTCTCCGCCTTTCCGATTTGGGACAGTACCCAATGGAAGTACAGA 2072
Query 2073 GAGAAACATTCGGAATAACTATCCCTACATGCATCAGTACATGACCAAATTTAATCAGAAAGGAGTAGAGGACG 2146
.||.||.|||||.||.|||||.|||||.|||||.|||||||||||||||||.||.||||..||.||||||||.|
Sbjct 2073 AAGGAATATTCGTAACAACTACCCCTATATGCACCAGTACATGACCAAATTCAACCAGAGGGGCGTAGAGGATG 2146
Query 2147 CCTTGGTCAGCCTGAAAACGGGGAAGCTGGACGCTTTCATCTACGATGCCGCAGTCTTGAATTACAAGGCTGGG 2220
|||||||||||.|||||||.| ||||.
Sbjct 2147 CCTTGGTCAGCTTGAAAACTG----GCTGC-------------------------------------------- 2172
Query 2221 AGGGATGAAGGCTGCAAGCTGGTGACCATCGGGAGTGGGTACATCTTTGCCACCACCGGTTATGGAATTGCCCT 2294
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2295 TCAGAAAGGCTCTCCTTGGAAGAGGCAGATCGACCTGGCCTTGCTTCAGTTTGTGGGTGATGGTGAGATGGAGG 2368
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2369 AGCTGGAGACCCTGTGGCTCACTGGGATCTGCCACAACGAGAAGAACGAGGTGATGAGCAGCCAGCTGGACATT 2442
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2443 GACAACATGGCGGGCGTATTCTACATGCTGGCTGCCGCCATGGCCCTTAGCCTCATCACCTTCATCTGGGAGCA 2516
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2517 CCTCTTCTACTGGAAGCTGCGCTTCTGTTTCACGGGCGTGTGCTCCGACCGGCCTGGGTTGCTCTTCTCCATCA 2590
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2591 GCAGGGGCATCTACAGCTGCATTCATGGAGTGCACATTGAAGAAAAGAAGAAGTCTCCAGACTTCAATCTGACG 2664
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2665 GGATCCCAGAGCAACATGTTAAAACTCCTCCGGTCAGCCAAAAACATTTCCAGCATGTCCAACATGAACTCCTC 2738
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2739 AAGAATGGACTCACCCAAAAGAGCTGCTGACTTCATCCAAAGAGGTTCCCTCATCATGGACATGGTTTCAGATA 2812
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2813 AGGGGAATTTGATGTACTCAGACAACAGGTCCTTTCAGGGGAAAGAGAGCATTTTTGGAGACAACATGAACGAA 2886
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2887 CTCCAAACATTTGTGGCCAACCGGCAGAAGGATAACCTCAATAACTATGTATTCCAGGGACAACATCCTCTTAC 2960
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 2961 TCTCAATGAGTCCAACCCTAACACGGTGGAGGTGGCCGTGAGCACAGAATCCAAAGCGAACTCTAGACCCCGGC 3034
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3035 AGCTGTGGAAGAAATCCGTGGATTCCATACGCCAGGATTCACTATCCCAGAATCCAGTCTCCCAGAGGGATGAG 3108
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3109 GCAACAGCAGAGAATAGGACCCACTCCCTAAAGAGCCCTAGGTATCTTCCAGAAGAGATGGCCCACTCTGACAT 3182
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3183 TTCAGAAACGTCAAATCGGGCCACGTGCCACAGGGAACCTGACAACAGTAAGAACCACAAAACCAAGGACAACT 3256
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3257 TTAAAAGGTCAGTGGCCTCCAAATACCCCAAGGACTGTAGTGAGGTCGAGCGCACCTACCTGAAAACCAAATCA 3330
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3331 AGCTCCCCTAGAGACAAGATCTACACTATAGATGGTGAGAAGGAGCCTGGTTTCCACTTAGATCCACCCCAGTT 3404
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3405 TGTTGAAAATGTGACCCTGCCCGAGAACGTGGACTTCCCGGACCCCTACCAGGATCCCAGTGAAAACTTCCGCA 3478
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3479 AGGGGGACTCCACGCTGCCAATGAACCGGAACCCCTTGCATAATGAAGAGGGGCTTTCCAACAACGACCAGTAT 3552
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3553 AAACTCTACTCCAAGCACTTCACCTTGAAAGACAAGGGTTCCCCGCACAGTGAGACCAGCGAGCGATACCGGCA 3626
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3627 GAACTCCACGCACTGCAGAAGCTGCCTTTCCAACATGCCCACCTATTCAGGCCACTTCACCATGAGGTCCCCCT 3700
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3701 TCAAGTGCGATGCCTGCCTGCGGATGGGGAACCTCTATGACATCGATGAAGACCAGATGCTTCAGGAGACAGGT 3774
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3775 AACCCAGCCACCGGGGAGCAGGTCTACCAGCAGGACTGGGCACAGAACAATGCCCTTCAATTACAAAAGAACAA 3848
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3849 GCTAAGGATTAGCCGTCAGCATTCCTACGATAACATTGTCGACAAACCTAGGGAGCTAGACCTTAGCAGGCCCT 3922
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3923 CCCGGAGCATAAGCCTCAAGGACAGGGAACGGCTTCTGGAGGGAAATTTTTACGGCAGCCTGTTTAGTGTCCCC 3996
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 3997 TCAAGCAAACTCTCGGGGAAAAAAAGCTCCCTTTTCCCCCAAGGTCTGGAGGACAGCAAGAGGAGCAAGTCTCT 4070
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 4071 CTTGCCAGACCACACCTCCGATAACCCTTTCCTCCACTCCCACAGGGATGACCAACGCTTGGTTATTGGGAGAT 4144
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 4145 GCCCCTCGGACCCTTACAAACACTCGTTGCCATCCCAGGCGGTGAATGACAGCTATCTTCGGTCGTCCTTGAGG 4218
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 4219 TCAACGGCATCGTACTGTTCCAGGGACAGTCGGGGCCACAATGATGTGTATATTTCGGAGCATGTTATGCCTTA 4292
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 4293 TGCTGCAAATAAGAATAATATGTACTCTACCCCCAGGGTTTTAAATTCCTGCAGCAATAGACGCGTGTACAAGA 4366
Sbjct 2173 -------------------------------------------------------------------------- 2172
Query 4367 AAATGCCTAGTATCGAATCTGATGTT 4392
Sbjct 2173 -------------------------- 2172
