Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00688
• Subject: NM_002086.5
• Aligned Length: 786
• Identities: 465
• Gaps: 245

Alignment

Query   1  ATGGAAGCCATCGCCAAATATGACTTCAAAGCTACTGCAGACGACGAGCTGAGCTTCAAAAGGGGGGACATCCT  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGAAGCCATCGCCAAATATGACTTCAAAGCTACTGCAGACGACGAGCTGAGCTTCAAAAGGGGGGACATCCT  74

Query  75  CAAGGTTTTGAACGAAGAATGTGATCAGAACTGGTACAAGGCAGAGCTTAATGGAAAAGACGGCTTCATTCCCA  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  CAAGGTTTTGAACGAAGAATGTGATCAGAACTGGTACAAGGCAGAGCTTAATGGAAAAGACGGCTTCATTCCCA  148

Query 149  AGAACTACATAGAAATGAAACCACATCCGTGGTTTTTTGGCAAAATCCCCAGAGCCAAGGCAGAAGAAATGCTT  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  AGAACTACATAGAAATGAAACCACATCCGTGGTTTTTTGGCAAAATCCCCAGAGCCAAGGCAGAAGAAATGCTT  222

Query 223  AGCATACGGCGCCCTCGGGCGGGCCGTGCTACGCAGCCCAGGCATGACTGTGGCCGAGAAGCTGCGTGTGGCAG  296
           ||||.||.||| .|.||...|||||.|.||                    |..||||||      |.|||..||
Sbjct 223  AGCAAACAGCG-GCACGATGGGGCCTTTCT--------------------TATCCGAGA------GAGTGAGAG  269

Query 297  CGTTGGTGGCCAGTGGTGTGGCCCTCTACGCCA------GCTCCTATGTGCCCTACCACATCATGCGGGTGCTC  364
           ||.|..|||..|.|    |..||||||..|.||      |...|.||||||   |.|||.|||   .|||||||
Sbjct 270  CGCTCCTGGGGACT----TCTCCCTCTCTGTCAAGTTTGGAAACGATGTGC---AGCACTTCA---AGGTGCTC  333

Query 365  AACG---TGGA-------------TGCTCGGCG-----------------------GCGCTGG------AGCAC  393
             ||   ||||             |.|||.|.|                       |.|||||      |.|||
Sbjct 334  --CGAGATGGAGCCGGGAAGTACTTCCTCTGGGTGGTGAAGTTCAATTCTTTGAATGAGCTGGTGGATTATCAC  405

Query 394  -------CCGCTGCC--------CGAGC-----TT--TGC-AGACATAGCCCAG--GCCACAGCAGCCCTGGAG  442
                  |..|||.|        |.|||     ||  ||| .|||||||..|||  ||||||||||||      
Sbjct 406  AGATCTACATCTGTCTCCAGAAACCAGCAGATATTCCTGCGGGACATAGAACAGGTGCCACAGCAGCC------  473

Query 443  CTGGGGCCCTACGTGGGCTACCAGGTGATGCGGGGCCTCATGCCCCTGGCCTTCTGTGTCCACCCTCTACTCTA  516
                |.|.|||||                              ||.||||.|||.||          ||| |.
Sbjct 474  -----GACATACGT------------------------------CCAGGCCCTCTTTG----------ACT-TT  501

Query 517  CATGGCCGCAG-----TGCCCAGCCTGGGCTGCTGCTGCCGACACTGCCCCGGCTA-------CAGGGACAGCT  578
           .||  ||.|||     ||...|| |||||||.|.||.|..||.|.|       .||       ||.|||.|.||
Sbjct 502  GAT--CCCCAGGAGGATGGAGAG-CTGGGCTTCCGCCGGGGAGATT-------TTATCCATGTCATGGATAACT  565

Query 579  -GGAACCCA----GAGGACGCCAA-GAGCACTGGCCA-----AGCCC-------TGCCCCTCA---ATGCCACA  631
            .||.||||    |.|||    || |||  ||.||||     ||.||       |.||||.||   |||.||| 
Sbjct 566  CAGACCCCAACTGGTGGA----AAGGAG--CTTGCCACGGGCAGACCGGCATGTTTCCCCGCAATTATGTCAC-  632

Query 632  GCCGCCCC-TAAACCGTCAGAGCCCCAGTCCCGTGAGCTGAGCCAA  676
               |||| |.|||||   ||.|    |||                
Sbjct 633  ----CCCCGTGAACCG---GAAC----GTC----------------  651