Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00688
• Subject: NM_002566.5
• Aligned Length: 1126
• Identities: 615
• Gaps: 454

Alignment

Query    1  ATGGAAGCCATC---------GCCAAAT-ATG--------ACTTCAAAGCTACTGCAGACGACGAGCTGA---G  53
            ||||.|||||.|         |||||.| .||        |||||...||..||||.||||||.|.||.|   |
Sbjct    1  ATGGCAGCCAACGTCTCGGGTGCCAAGTCCTGCCCTGCCAACTTCTTGGCAGCTGCCGACGACAAACTCAGTGG  74

Query   54  CTTCAAAAGGGGGGACATCCT------------------------------------------CAA------GG  79
            .|||.|   |||||||.||||                                          |||      ||
Sbjct   75  GTTCCA---GGGGGACTTCCTGTGGCCCATACTGGTGGTTGAGTTCCTGGTGGCCGTGGCCAGCAATGGCCTGG  145

Query   80  TTTTGAAC--------------GAAGAA------------------TGTGATC---------------------  100
            ...||.||              ||||.|                  .|||.||                     
Sbjct  146  CCCTGTACCGCTTCAGCATCCGGAAGCAGCGCCCATGGCACCCCGCCGTGGTCTTCTCTGTCCAGCTGGCAGTC  219

Query  101  ----------------------------------------------------------AGAACTGGTAC-----  111
                                                                      ||.|||||..|     
Sbjct  220  AGCGACCTGCTCTGCGCCCTGACGCTGCCCCCGCTGGCCGCCTACCTCTATCCCCCCAAGCACTGGCGCTATGG  293

Query  112  -AAGGC--------------AGAGCTTAAT-------------------GGAAAAGACGGCTTCAT--------  143
             .||||              ||.||||..|                   ||.|..|.|..||||||        
Sbjct  294  GGAGGCCGCGTGCCGCCTGGAGCGCTTCCTCTTCACCTGCAACCTGCTGGGCAGCGTCATCTTCATCACCTGCA  367

Query  144  ----TCCCAAGAACTACATAGAAAT--------------------GAAACCACAT-------------------  174
                .|.|||...||||.|.|..||                    |||.||||.|                   
Sbjct  368  TCAGCCTCAACCGCTACCTGGGCATCGTGCACCCCTTCTTCGCCCGAAGCCACCTGCGACCCAAGCACGCCTGG  441

Query  175  -CCGTG-------------------------------------------------GTTTTT-------------  185
             |||||                                                 |.||.|             
Sbjct  442  GCCGTGAGCGCTGCCGGCTGGGTCCTGGCCGCCCTGCTGGCCATGCCCACACTCAGCTTCTCCCACCTGAAGAG  515

Query  186  ---------------TGGCAA-------------AATCCCCAGAGC------CAAG------------GCAGA-  212
                           .|||||             |..|||.|| ||      ||||            ||||| 
Sbjct  516  GCCGCAGCAGGGGGCGGGCAACTGCAGCGTGGCCAGGCCCGAG-GCCTGCATCAAGTGTCTGGGGACAGCAGAC  588

Query  213  ------------------AGA-----------AATGCT------------------------------------  221
                              |||           ..||||                                    
Sbjct  589  CACGGGCTGGCGGCCTACAGAGCGTATAGCCTGGTGCTGGCGGGGTTGGGCTGCGGCCTGCCGCTGCTGCTCAC  662

Query  222  -----TAGCATACGGCGCCCTCGGGCGGGCCGTGCTACGCAGCCCAGGCATGACTGTGGCCGAGAAGCTGCGTG  290
                 .|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  663  GCTGGCAGCCTACGGCGCCCTCGGGCGGGCCGTGCTACGCAGCCCAGGCATGACTGTGGCCGAGAAGCTGCGTG  736

Query  291  TGGCAGCGTTGGTGGCCAGTGGTGTGGCCCTCTACGCCAGCTCCTATGTGCCCTACCACATCATGCGGGTGCTC  364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  TGGCAGCGTTGGTGGCCAGTGGTGTGGCCCTCTACGCCAGCTCCTATGTGCCCTACCACATCATGCGGGTGCTC  810

Query  365  AACGTGGATGCTCGGCGGCGCTGGAGCACCCGCTGCCCGAGCTTTGCAGACATAGCCCAGGCCACAGCAGCCCT  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  AACGTGGATGCTCGGCGGCGCTGGAGCACCCGCTGCCCGAGCTTTGCAGACATAGCCCAGGCCACAGCAGCCCT  884

Query  439  GGAGCTGGGGCCCTACGTGGGCTACCAGGTGATGCGGGGCCTCATGCCCCTGGCCTTCTGTGTCCACCCTCTAC  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  GGAGCTGGGGCCCTACGTGGGCTACCAGGTGATGCGGGGCCTCATGCCCCTGGCCTTCTGTGTCCACCCTCTAC  958

Query  513  TCTACATGGCCGCAGTGCCCAGCCTGGGCTGCTGCTGCCGACACTGCCCCGGCTACAGGGACAGCTGGAACCCA  586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  TCTACATGGCCGCAGTGCCCAGCCTGGGCTGCTGCTGCCGACACTGCCCCGGCTACAGGGACAGCTGGAACCCA  1032

Query  587  GAGGACGCCAAGAGCACTGGCCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCGTCAGAGCCCCAGTC  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  GAGGACGCCAAGAGCACTGGCCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCGTCAGAGCCCCAGTC  1106

Query  661  CCGTGAGCTGAGCCAA  676
            ||||||||||||||||
Sbjct 1107  CCGTGAGCTGAGCCAA  1122