Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02397
- Subject:
- NM_201428.3
- Aligned Length:
- 3059
- Identities:
- 654
- Gaps:
- 2371
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGAGGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGCTCTCTTTGCTCTGATGAGCCATCTTCAGAAATTATGACTTCTTCCTTTCTTTCATCTTCTGAAATACAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACACTGGCCTTACAATACTACATGGAGAAAAAAGCCATGTGTTAGGGAGCCAGCCTATTTTAGCCAAAGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAAGACCACTTGGATCTTCTAGATATGAAAAAGATGGAAAAGCCTCAGGGGACCAGCAACAACGTATCAGACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTCAGTTTCTCTTGCAGCAGGAGTTCATTGTGACCGTCCTTCTATTCCAGCCAGTTTCCCAGAGCATCCTGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTCTCTCAAAGAAAATTGGTCAAGTGGAAGAGCAAATAGATAAAGAGACCAAGAACCCAAATGGGGTATCAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGGGAGGCTAAAACTGCATTGGATGCTGATGACAGATTCACTTTGCTGACAGCCCAGAAACCACCTACTGAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTCTAAGGTAGAAGGCATTTATACATATTCTTTGTCTCCATCCAAAGTTTCAGGAGATGATGTTATTGAAAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATTCCCCTGAATCACCATTTGAAGTAATTATTGACAAAGCAGCATTTGACAAAGAATTTAAAGACTCATATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGAGCACAGATGATTTTGGTAGCTGGTCTGTGCACACTGATAAAGAATCATCCGAAGACATTTCAGAGACTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGACAAGCTTTTTCCACTGAGAAATAAAGAGGCAGGACGTTACCCAATGTCTGCATTGCTCAGTAGGCAGTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCACACACAAATGCAGCACTGGAAGAGGTGTCCAGATGCGTGAATGATATGCATAACTTTACTAACGAAATACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCATCACAAAAACTACAGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGACATGAGTGAATATAATTCAGAAATTCCAGTTGTAAATCTTAAAACTAGCACTCATCAGAAAACTCCTGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTTCTATTGATGGGAGCACTCCCATCACTAAATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCTATTACTGGAAAACCTGTACCTGACTCTTTGAATTCCACAAAAGAATTCAGTATCAAAGGTGTGCAAGGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATATGCAGAAACAGGATGACACACTTGCAGAATTACCTGGATCTCCACCTGAGAAATGTGACTCTTTGGGTTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAGTGGCCACAGTGAAAGTGGTTTTACCTGATGACCACCTGAAAGATGAAATGGACTGGCAGAGCTCTGCATT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGAGAAATCACAGAAGCTGATAGTTCTGGTGAGTCTGATGACACAGTAATAGAGGACATCACAGCAGATACAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATTTGAAAATAACAAAATTCAGGCTGAAAAACCTGTTTCCATTCCAAGTGCTGTTGTAAAAACAGGTGAAAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAATCAAAGAGATTCCCAGTTGTGAGAGAGAAGAAAAAACATCTAAAAACTTTGAAGAATTGGTCAGTGACTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGCTGCATCAAGATCAGCCTGATATTCTTGGAAGGAGTCCAGCTAGTGAGGCAGCATGTTCAAAAGTACCCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATACGAATGTCTCCTTAGAAGATGTGAGTGAAGTTGCTCCTGAAAAGCCTATTACTACTGAGAACCCCAAACTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTTCAACAGTGTCTCCAAATGTTTTTAATGAGACAGAATTCTCATTAAATGTGACAACATCTGCCTATTTGGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTCATTACATGGGAAAAATGTTAAACATATAGATGATTCCTCCCCAGAGGACCTGATAGCAGCCTTTACAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCAGAGATAAAGGAATAGTAGATAGTGAAAGAAATGCTTTTAAAGCAATATCAGAGAAGATGACAGACTTTAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACAACTCCTCCTGTAGAAGTCTTACATGAAAATGAGTCCGGTGGTTCTGAAATTAAAGACATTGGAAGCAAATA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGTGAACAAAGCAAAGAAACAAATGGAAGTGAGCCTCTAGGTGTTTTCCCTACCCAAGGTACTCCAGTAGCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCTTGACTTAGAACAAGAACAGCTCACAATTAAGGCTCTTAAAGAATTAGGTGAAAGACAGGTTGAGAAGTCA 2220
Query 1 -----------------------ATGGC----------------GGAGC---------CGTCGGC--------- 17
||.|| |.||| |.|..||
Sbjct 2221 ACTTCTGCACAGCGTGACGCAGAATTGCCTTCTGAAGAAGTACTGAAGCAAACTTTCACATTTGCTCCAGAATC 2294
Query 18 --GGCCACTCAG-TCCCATTCCATCTCCTCG-TCGTCCT-TC------GGAGCCGAGCCGTCCGCGCCCGGCGG 80
||||||..|| ||..||..|| ||||.| .|||..| || |||.|.||.|
Sbjct 2295 TTGGCCACAGAGATCATATGACA--TCCTAGAACGTAATGTCAAGAATGGATCTGATC---------------- 2350
Query 81 CGGCGGGA--GCCCAGGAGCC------------------------------TGC-----CCCGCCCTGG--GGA 115
..|||| .|||||.|||| ||| ||.|||.|.| .||
Sbjct 2351 --TTGGGATTTCCCAGAAGCCCATCACTATCAGAGAAACTACTAGGGTAGATGCTGTTTCCAGCCTTAGCAAGA 2422
Query 116 C-GAAGAGCT------GCAGCTCCT-------CCTGTG----------CGGTGCACGATCTGATTTTCTGGAGA 165
| |||..|.| |||..|||| |.|.|| |.||||||||||||||||||||||||
Sbjct 2423 CTGAATTGGTAAAAAAGCATGTCCTAGCAAGACTTCTGACAGACTTCTCAGTGCACGATCTGATTTTCTGGAGA 2496
Query 166 GATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTGGCAGCTTTCAGTGTCAT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2497 GATGTGAAGAAGACTGGGTTTGTCTTTGGCACCACGCTGATCATGCTGCTTTCCCTGGCAGCTTTCAGTGTCAT 2570
Query 240 CAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCGTCATCC 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2571 CAGTGTGGTTTCTTACCTCATCCTGGCTCTTCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCGTCATCC 2644
Query 314 AAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACCTGGACGTAGACATTACTCTGTCCTCAGAA 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2645 AAGCTGTACAGAAGTCAGAAGAAGGCCATCCATTCAAAGCCTACCTGGACGTAGACATTACTCTGTCCTCAGAA 2718
Query 388 GCTTTCCATAATTACATGAATGCTGCCATGGTGCACATCAACAGGGCCCTGAAACTCATTATTCGTCTCTTTCT 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2719 GCTTTCCATAATTACATGAATGCTGCCATGGTGCACATCAACAGGGCCCTGAAACTCATTATTCGTCTCTTTCT 2792
Query 462 GGTAGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCTGTTTTTA 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2793 GGTAGAAGATCTGGTTGACTCCTTGAAGCTGGCTGTCTTCATGTGGCTGATGACCTATGTTGGTGCTGTTTTTA 2866
Query 536 ACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCTATGAGAAGTACAAGACC 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2867 ACGGAATCACCCTTCTAATTCTTGCTGAACTGCTCATTTTCAGTGTCCCGATTGTCTATGAGAAGTACAAGACC 2940
Query 610 CAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAAACTCCC 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2941 CAGATTGATCACTATGTTGGCATCGCCCGAGATCAGACCAAGTCAATTGTTGAAAAGATCCAAGCAAAACTCCC 3014
Query 684 TGGAATCGCCAAAAAAAAGGCAGAA 708
|||||||||||||||||||||||||
Sbjct 3015 TGGAATCGCCAAAAAAAAGGCAGAA 3039
