Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02663
- Subject:
- NR_135296.1
- Aligned Length:
- 3020
- Identities:
- 1179
- Gaps:
- 1807
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAATGATGATGTCGCACGCTGGGTGGGAACTGACGTCACCTGTGCTCACCGCCGCTTCCGGTCCGCGTGAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCATTCTCGCGCCGGTGGCGAGGTTAGGGCCCGCGTTGCGACGTGGTGCAGCGCATATTTTCACAAGTGGGTCT 148
Query 1 ---------------ATGGCCACTGACTCATGGGCCCTGGCGGTGGACGAGCAGGAAGCTGCGGCTG---AGTC 56
||||||||.|||||.||||||||||||||||||||||||||| ||||||| ||||
Sbjct 149 CCCTTGTCCGGGACTATGGCCACCGACTCGTGGGCCCTGGCGGTGGACGAGCAGGAA---GCGGCTGTCAAGTC 219
Query 57 GTTGAGCAACTTGCATCTTAAGGAAGAGAAAATCAAACCAGATACCAATGGTGCTGTTGTCAAGACCAATGCCA 130
|.|||.|||.|||||..|.||||||||||||.|||||.||||||||||||| |.||.||||.||||.|.|||
Sbjct 220 GATGACCAATTTGCAGATCAAGGAAGAGAAAGTCAAAGCAGATACCAATGG---TATTATCAAAACCAGTACCA 290
Query 131 ATGCAGAGAAGACAGATGAAGAAGAGAAAGAGGACAGAGCTGCCCAGTCCTTACTCAACAAGCTGATCAGAAGC 204
.|||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 CTGCCGAGAAAACAGATGAAGAGGAGAAAGAGGACAGAGCTGCCCAGTCCTTACTCAACAAGCTGATCAGAAGC 364
Query 205 AACCTTGTTGATAACACAAACCAAGTGGAAGTCCTGCAGCGGGATCCAAACTCCCCTCTGTACTCGGTGAAGTC 278
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 365 AACCTTGTTGATAACACAAACCAAGTGGAAGTCCTGCAACGGGATCCAAACTCCCCTCTGTACTCGGTGAAGTC 438
Query 279 TTTTGAAGAGCTTCGGCTGAAACCACAGCTTCTCCAAGGAGTCTATGCCATGGGTTTCAATCGTCCATCCAAGA 352
.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||.|||||||
Sbjct 439 GTTTGAAGAGCTTCGGCTGAAACCACAGCTTCTCCAGGGAGTCTATGCCATGGGCTTCAATCGACCCTCCAAGA 512
Query 353 TACAAGAGAACGCATTGCCACTGATGCTTGCTGAGCCCCCACAGAACTTAATTGCCCAATCTCAGTCTGGTACT 426
||||||||||||||||.||..|||||||||||||.||
Sbjct 513 TACAAGAGAACGCATTACCCATGATGCTTGCTGAACC------------------------------------- 549
Query 427 GGTAAAACAGCTGCCTTCGTGCTGGCCATGCTTAGCCAAGTAGAACCTGCAAACAAATACCCCCAGTGTCTATG 500
Sbjct 550 -------------------------------------------------------------------------- 549
Query 501 TCTCTCCCCAACGTATGAGCTCGCCCTCCAAACAGGAAAAGTGATTGAACAAATGGGCAAATTTTACCCTGAAC 574
Sbjct 550 -------------------------------------------------------------------------- 549
Query 575 TGAAGCTAGCTTATGCTGTTCGAGGCAATAAATTGGAAAGAGGCCAGAAGATCAGTGAGCAGATTGTCATTGGC 648
|||||||||||||||||||||||||||||||||||||||||
Sbjct 550 ---------------------------------TGGAAAGAGGCCAGAAGATCAGTGAGCAGATTGTCATTGGC 590
Query 649 ACCCCTGGGACTGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGATCCCAAGAAAATCAAGGTGTTTGTTCT 722
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 ACCCCTGGGACCGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGATCCCAAGAAAATCAAGGTGTTTGTTCT 664
Query 723 GGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAGCATCCGCATCCAGAGGATGCTGCCCA 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 GGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAGCATCCGCATCCAGAGGATGCTGCCCA 738
Query 797 GGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGTGGAAGTTTGCCCAGAAAGTGGTCCCA 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 GGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGTGGAAGTTTGCCCAGAAAGTGGTCCCA 812
Query 871 GACCCAAACGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGACACCATCAAGCAGTACTATGTCCTGTGCAG 944
||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 813 GACCCAAATGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGATACCATCAAGCAGTACTATGTCCTGTGCAG 886
Query 945 CAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCATCACCATTGCTCAAGCCATGATCTTCT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 CAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCATCACCATTGCTCAAGCCATGATCTTCT 960
Query 1019 GCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAGAAGGCCACCAGGTGGCTCTGCTGAGT 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAGAAGGCCACCAGGTGGCTCTGCTGAGT 1034
Query 1093 GGGGAGATGATGGTGGAACAGAGGGCTGCAGTGATTGAGCGCTTCCGAGAGGGCAAAGAGAAGGTTTTGGTGAC 1166
|||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GGGGAGATGATGGTGGAGCAGAGGGCTGCGGTGATTGAGCGCTTCCGAGAGGGCAAAGAGAAGGTTTTGGTGAC 1108
Query 1167 CACCAACGTGTGTGCCCGCGGCATTGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACA 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 CACCAACGTGTGTGCCCGCGGCATTGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACA 1182
Query 1241 AGGACGGGAATCCTGACAATGAGACCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTG 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 AGGACGGGAATCCTGACAATGAGACCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTG 1256
Query 1315 GCAGTGAACATGGTGGACAGCAAGCACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGAT 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 GCAGTGAACATGGTGGACAGCAAGCACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGAT 1330
Query 1389 AGAAAGATTGGACACAGATGATTTGGACGAGATTGAGAAAATAGCCAAC------------------------- 1437
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 AGAAAGATTGGACACAGATGATTTGGACGAGATTGAGAAAATAGCCAACTGAGAAGCTCCACCAGCCACTGATG 1404
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1405 CCAGCCCTGGCACTGCCCCTGCACAGGAGACAAGTGCATTTAGGGCACAGGCCCCGACATCACCCCAAGGACAA 1478
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1479 CGGCAGAAGTAGAGAGAAACTACCTACCTCACTTCAAATTATGTTTGGACTTGACAAAAATAGGTGCAAATGAT 1552
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1553 GGGGGGCAATAGAAGAAAAAATTTGCATTTTGGAAAATTGGGTCCTTTCCCCACTTTTTTAAAGCCACATTCCC 1626
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1627 CCATCTTTATAATAATCTGGTCACAGTGGTAGTCGCTGGCCCCAGGACCCCCTCCTGATTTTGGCTAGGCATCG 1700
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1701 TGGAACCAGCTCCAGCCCCTGAAGAAACGATAGATGTGCAGGTTGTGCGGAAGAGGCTGAGTGGAAAATGGTGT 1774
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1775 GAGCCCCACCGCTGTGCATCGAATGAGGGAAGTGGCAGCAGAGAGGCCAGAGCTGCCCCCTCTCTGTCTCTTCA 1848
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1849 ATGGACCCTTCACAAGTGTTTCTCCTGCCCTTGGGGCTGTCTTCCTTCTCCTGAAATCCAGAGACTTTCTTGCT 1922
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1923 CATCCCTTCTCCCTTTCACTTCTGTTCTCTGCTGCAGAAAGCAGACTTGCATATCCCTGATGAGCAGCTCGGCT 1996
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 1997 ACTTTTGTAAACTTCAGATTTGGAGAGAAACACGAAAGTCTGAATCCTGACCCCTTGAGAGAGAGTGATCTGGC 2070
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2071 GAGGGCCGATGAAGGGGCTGGGCCTGGTCTTGCCTTCTCTTCTCTCGGTTGCTCCCTCTGCCTAGGCCCCTGGT 2144
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2145 ACTCAGTCACGGCAGCCAGGAGACCCCAGGTGAGTTTCTGAGCGCATACGTAGTTGGTTCTTACCCCCAGGTGT 2218
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2219 CACACGGGGCCGAGAGCTGAGCAAGAATTTGGAATGGAAGTTATGACCAAGGGAATTATGCTGTTCATTTATAA 2292
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2293 TAGTGGACATTATGGAGAGCTCTGATTCCTACATAATATGAATAAGGATGGATAGGCCGGGCGTGGTGGCTCAT 2366
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2367 GCCTATAATCCCAGCACGTTGGGAGGCTGAGGCGGGCGGATCGGTTGAGCTCAGGCGTTCGGGACCAGCCTGGC 2440
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2441 CAACATGATGAAACCCCGTCTCTACCAAAAATAGAAAAAAATATAGCCGGGCCTGGTGGCGCACGCCTGTAGTC 2514
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2515 CCAGCTACTCGGGAGGCTGAGGTAGGAGGATCGCTTGAGCCTGGGTAGAGGCTGCTGTGAGCTGAAATGGCGCC 2588
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2589 ACTGCACTCCAGCCTGGGTAACAGAGCGAGACCCCGACTCAATAAATAAATAAGGATGGATAAATTGTAGCGTA 2662
Query 1438 -------------------------------------------------------------------------- 1437
Sbjct 2663 TGCACCATTCATTATGCTAAGACATTTTAAAGTAATTATGAGAAACGCTCTACTAATGATTTGTTTTTATTTGT 2736
Query 1438 ------------------------------------------------------------ 1437
Sbjct 2737 ATTTTTCTGCTTATTAGACAAATATATACTCATTTTAAAAAGGAAAAAAAAAAAAAAAAA 2796
