Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03640
- Subject:
- NR_164122.1
- Aligned Length:
- 4475
- Identities:
- 1941
- Gaps:
- 2534
Alignment
Query 1 ----------------------ATGGCGCGGGCTGGCCCTCGGCTGGTGCTGAGCGAGGAGGCGGTTCGGGCGA 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTCCGAGGGCTCCGTTTGAAACATGGCGCGGGCTGGCCCTCGGCTGGTGCTGAGCGAGGAGGCGGTTCGGGCGA 74
Query 53 AGAGCGGCTTAGGGCCTCACCGCGACCTG--------------------------------------------- 81
|||||||||||||||||||||||||||||
Sbjct 75 AGAGCGGCTTAGGGCCTCACCGCGACCTGGGTGCGCCGGAGGGCGGGCGGGGGTGCAAGCGTGAGGTGGCGGGG 148
Query 82 -------------------------------------------------------------------------- 81
Sbjct 149 GGGTGGGTGCCGAGCTTCCCGGGGCGGCGGCGGACCGTGGGCAGGCGGGACCCGTCTACGCAGGCGCCGCGGGC 222
Query 82 ---------------------------------------GCTGAGCTTCAGTCATTGTCTATTCCTGGAACTTA 116
|||||||||||||||||||||||||||||||||||
Sbjct 223 GTCCGGAACGGTCGCGGGCGAGCGGGGCGCGCGTGTCCAGCTGAGCTTCAGTCATTGTCTATTCCTGGAACTTA 296
Query 117 CCAAGAGAAGATCACCCACCTGGGACATTCTCTGATGAGTTTAACAGGTCTGAAATCTTTGGATCTCTCGCGCA 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAAGAGAAGATCACCCACCTGGGACATTCTCTGATGAGTTTAACAGGTCTGAAATCTTTGGATCTCTCGCGCA 370
Query 191 ACTCCTTGGTTAGTCTGGAGGGCATTCAGTACCTGACTGCATTGGAGAGTCTCAATCTCTACTACAACTGCATC 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACTCCTTGGTTAGTCTGGAGGGCATTCAGTACCTGACTGCATTGGAGAGTCTCAATCTCTACTACAACTGCATC 444
Query 265 TCCTCGTTGGCAGAAGTGTTTCGGCTCCACGCCTTAACCGAGCTCGTGGATGTGGACTTCCGGCTGAACCCCGT 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCCTCGTTGGCAGAAGTGTTTCGGCTCCACGCCTTAACCGAGCTCGTGGATGTGGACTTCCGGCTGAACCCCGT 518
Query 339 GGTGAAGGTTGAGCCTGACTACCGCCTTTTTGTTGTGCACCTGCTCCCCAAGCTCCAGCAGCTGGACGATCGCC 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGTGAAGGTTGAGCCTGACTACCGCCTTTTTGTTGTGCACCTGCTCCCCAAGCTCCAGCAGCTGGACGATCGCC 592
Query 413 CCGTGAGAGCAAGCGAGCGGAAGGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAGC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGTGAGAGCAAGCGAGCGGAAGGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAGC 666
Query 487 GTCCCAGCTTCTTTGAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAG 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTCCCAGCTTCTTTGAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAG 740
Query 561 CCTGGTCATGGATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCTC 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTGGTCATGGATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCTC 814
Query 635 CCGGGAGCACGAGCTTCAGCCAGAAGGGGCGTGAGGCCGACTCTCGTGGTTCCCAAGAATCCAGACATCTGTTG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCGGGAGCACGAGCTTCAGCCAGAAGGGGCGTGAGGCCGACTCTCGTGGTTCCCAAGAATCCAGACATCTGTTG 888
Query 709 AGCCCGCAGTTGGTACAGTACCAGTGTGGGGACTCTGGGAAGCAGGGCCGTGAGACGAGGAGGAGCAGCTGCAG 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCCCGCAGTTGGTACAGTACCAGTGTGGGGACTCTGGGAAGCAGGGCCGTGAGACGAGGAGGAGCAGCTGCAG 962
Query 783 AGGGTGCTGTCTGGAGAAGATGCCTTGGAGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAG 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGGTGCTGTCTGGAGAAGATGCCTTGGAGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAG 1036
Query 857 AGGCCTCCCGTGCCCCCAGGCCACACACGTACTTCACCCCACACCCAGACTCCATGGATACCGAGGACTCGGCC 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGCCTCCCGTGCCCCCAGGCCACACACGTACTTCACCCCACACCCAGACTCCATGGATACCGAGGACTCGGCC 1110
Query 931 TCTTCTCAGAAGTTGGATTTGTCAGGAGAAATGGTGCCTGGTCCCCTGCCAGCCCCCGGAAAGTGCAGGAAGCG 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTTCTCAGAAGTTGGATTTGTCAGGAGAAATGGTGCCTGGTCCCCTGCCAGCCCCCGGAAAGTGCAGGAAGCG 1184
Query 1005 AAGAATGCCTGTTGGAAGATTCCAGACGTTTTCGGACCAGGAGGGTTTGGGCTGCCCGGAGAGAACTCATGGGT 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGAATGCCTGTTGGAAGATTCCAGACGTTTTCGGACCAGGAGGGTTTGGGCTGCCCGGAGAGAACTCATGGGT 1258
Query 1079 CCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCT 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCT 1332
Query 1153 GAGGCCTCGGAGACTGAGGAGCAGAGGTCTCGGGGTGTGACCGACACCAGAGAGCCGTCTCCCGGGTCACACTC 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGGCCTCGGAGACTGAGGAGCAGAGGTCTCGGGGTGTGACCGACACCAGAGAGCCGTCTCCCGGGTCACACTC 1406
Query 1227 GGCTCTACCCGGGAAGAAGACGGCCCTGCAGGCGGCGCTCCTGGAGACGCTCTTGGACCTGGTGGACAGGAGCT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCTCTACCCGGGAAGAAGACGGCCCTGCAGGCGGCGCTCCTGGAGACGCTCTTGGACCTGGTGGACAGGAGCT 1480
Query 1301 GGGGCGGCTGCAGGTCCCTGCACAGCAACGAGGCATTCCTTGCTCAGGCAAGACACATCTTGTCATCTGTTGAA 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGGGCGGCTGCAGGTCCCTGCACAGCAACGAGGCATTCCTTGCTCAGGCAAGACACATCTTGTCATCTGTTGAA 1554
Query 1375 GAATTCACAGCAGCTCAGGACAGCTCTGCGATGGTGGGTGAAGATGTCGGCTCCCTGGCTCTGGAGAGTAAGTC 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAATTCACAGCAGCTCAGGACAGCTCTGCGATGGTGGGTGAAGATGTCGGCTCCCTGGCTCTGGAGAGTAAGTC 1628
Query 1449 CCTGCAAAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGAGCTGCACC 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCTGCAAAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGAGCTGCACC 1702
Query 1523 ACACACACAAGGAGCTGGATGATTTGAGACAACATTTAGATAAATCTTTGGAAGAGAACAGTAGGTTAAAATCG 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ACACACACAAGGAGCTGGATGATTTGAGACAACATTTAGATAAATCTTTGGAAGAGAACAGTAGGTTAAAATCG 1776
Query 1597 CTTTTGTTGAGTATGAAAAAGGAAGTGAAGAGTGCAGACACTGCAGCCACGTTAAATTTGCAGATCGCTGGACT 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTTTTGTTGAGTATGAAAAAGGAAGTGAAGAGTGCAGACACTGCAGCCACGTTAAATTTGCAGATCGCTGGACT 1850
Query 1671 TCAAACAAGTGTGAAGAGGCTGTGTGGCGAGATTGTGGAACTGAAGCAGCACCTGGAGCACTACGACAAGATCC 1744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCAAACAAGTGTGAAGAGGCTGTGTGGCGAGATTGTGGAACTGAAGCAGCACCTGGAGCACTACGACAAGATCC 1924
Query 1745 AGGAGCTCACGCAGATGCTGCAGGAGAGCCACAGCTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTG 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGGAGCTCACGCAGATGCTGCAGGAGAGCCACAGCTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTG 1998
Query 1819 AGCCAGGTGCGGGCGCAGCACAGAGCCGAGGTGGAGCAGATGCACTGGAGCTACCAGGAGCTCAAGAAGACCAT 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGCCAGGTGCGGGCGCAGCACAGAGCCGAGGTGGAGCAGATGCACTGGAGCTACCAGGAGCTCAAGAAGACCAT 2072
Query 1893 GGCCCTGTTTCCACACAGCAGCGCCAGCCATGGAGGCTGCCAGGCCTGC------------------------- 1941
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGCCCTGTTTCCACACAGCAGCGCCAGCCATGGAGGCTGCCAGGCCTGCTGACTCCTGCCGAGAAGCTGGGCCA 2146
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2147 CCCCTTAAGCTTCCTGGTTTACTAGAAATTCCCAACTGTTCCAAAGTGGTGGTACCCGCAGGCCCGACTGCTAG 2220
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2221 TTGTGTATGACCACGTCTGCCGGTCCATGTTTTCAGCACCCATTGCCTGAAGTGTTAGCACCTTCACTCCGGCA 2294
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2295 CTGAACTTCCCAGCCCTGCCGTGGAAGCTGCCTGCCAGGTCCTCCCCATCCTCAGGTGGAGGCTTCTCTGTTGA 2368
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2369 GGGGCCTCGGAGACCGCCCCCCAGCCCTCAGCGGACCATGCTGGCTGGGAGCTCCGCCCTGGGGCTTCTGCTCT 2442
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2443 GCTCAGATCCACGCGGCCAGCCTTGCCCTTGCCCTTGCCAGAGGGGTCGAAGCGCTCCTTGTGGGAGCCCGTGA 2516
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2517 ACTTGGTGGTGTCCGTGAGCCTCGACACTGTGGGCGACGAGATGGCTTTCTGCAAGAGGAGCAGGAGGAAGGGG 2590
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2591 GCAGATCTACCACAACTAACCCAAAGTGGGGTTTTTCAGTGTTTAAAACAAGAGATCCTGTGGATGAGGCTCAG 2664
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2665 CTCTGCAAAAGGCACCTGCATTTCACCAGGGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAA 2738
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2739 GCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGAGTCAGGGGACAAATGACCCATAAAACCCC 2812
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2813 AGCAAGCCTTTCCAGAAGTCAGTGAGCAGAGGGCCTAGAATAGCCAAAACGATTTCAAGAAATGAGAACAGAGT 2886
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2887 CAGAAGACTGACTACCCAACTCCAAAGCTCATCGAGGCTTGACTGCAAAGTGGCAGCGACGTGGGCACGGGCAC 2960
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2961 GCGGCCAGCCCCGCAGCCCAGGGGGAGTCTGGCTCAGCCACATGCATGCTGCCCCCCCGATGTCTACAGGTGCA 3034
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3035 GAGGCAAGCCAGAGAGAAAGGACTGTTTCTTCCACAAGTGGAGCTGGAGCAACTGGTGATCCCTGTGCAAATTA 3108
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3109 AAATGCACTTTGGTCTATACTGCACACTATATACAAAACTAACTCAAAATAGATGACGGTCCTAATTATGAAAC 3182
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3183 TAAAACTTCTAGAAGAACACCAAAGAGAAGATCTCTGTGACCTGGGGTTAGGCGAAGATTTCTTAGAAATGGCA 3256
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3257 ACAAAACATGGCCTATAGTGGAAAAAATGGATGAACTAGACTTCATCAAAACGTTCGAAACTCTGCTCTCAGAA 3330
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3331 GACACCGTTAAGGGAATGAGAAGACAAGCCACAGACTAGGAGACATGCCTGAGAAAGGACTTGTCTCTGAGATA 3404
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3405 CACAAAGGAACCTTAAAACTCAGCAGTAAGAAAAAAAATCCATGTGAAAAGACGGGCAGAATATTTGAAGCAGA 3478
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3479 CACCACCAGAGAAGACACGTGCATGCAGACAAGCACACGGAGAGGGGTCCGCGTGGGCCCCATCAGGGAAGTAC 3552
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3553 AGACAAGCACACGGAGAGGGGTCCGCGTGGGCGCCGTCAGGGAAGTACCGACAAGCACACAGAGAGGGGGCCGT 3626
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3627 GTGGGCGCCGTCAGGGAAGTACCGACAAGCACACAGAGAGGGGGCCGTGTGGGCGCCGTCAGGGAAGTGCGGAC 3700
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3701 AAGCACACAGAGAGGGGGCCGTGTGGGCGCCGTCAGGGAAGTACCGACAAGCACACAGAGAGGGGGCCGTGTGG 3774
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3775 GCGCCGTCAGGGAAGTACCGACAAGCACACTGGAGAGGGGTCCGCGTGGGCCCCATCAGGGAAGTACCGACAAG 3848
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3849 CACACGGAGAGGGGTCCGCGTGGGCCCCGTCAGGGAAGTACCGACAAGCACACGGAGAGGGGTCCGCGTGGGCG 3922
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3923 CCGTCAGGGAAGTACCGACAAGCACACAGAGAGGGGGCCGTGTGGGCGCCGTCAGGGAAGTGCGGACAAGCACA 3996
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3997 CGGAGAGGGGTCCGCGTGGGCGCCGTCAGGGAAGTACCGACAAGCACACAGAGAGGGGGCCGTGTGGGCGCCGT 4070
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 4071 CAGGGAAGTGCGGACAAGCACACTGGAGAGGGGTCCGCGTGGGCCTCGTCAGGGAAGTACCGACAAGCACACAG 4144
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 4145 AGAGGGGGCCGCGTGGGCGCCGTCAGGGAAGTGCGGACAAGCACACGGAGAGGGGGCCGCGTGGGCGCCGTCAG 4218
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 4219 GGAAGTGCAGATGGAAACCACAGCGAGGCCCCTGCACACTCTCCAGGGGGCTCAGACAATCAAATAAACTGCCG 4292
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 4293 GCACCTCGAGCTGAGCAGGCCGCGGGGTGGGGGCCTCGTCCACACCCGGCCGAGCAACGCGGCAGAGCCACTGT 4366
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 4367 GGACAGCTTCTCATCACAGCCAAAGGTGGCCCAGCAGTCCCGTTCCTGGGTCCTTGCTCAAGAGAAATGAAAAC 4440
Query 1942 ----------------------------------- 1941
Sbjct 4441 AGAGGCTCACACATAAACGCAAATGTTTACCACTG 4475
