Construct: ORF ccsbBroad304_03640

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013642.1_s304c1, BRDN0000402487
Derived from:
ccsbBroadEn_03640
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CEP72 (55722)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03640
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55722 CEP72 centrosomal protein 72 NM_018140.4 100% 100%
2 human 55722 CEP72 centrosomal protein 72 XM_011514063.1 100% 100%
3 human 55722 CEP72 centrosomal protein 72 XM_005248322.3 92.2% 92.2% 0_1ins150
4 human 55722 CEP72 centrosomal protein 72 XM_011514064.2 92.2% 92.2% 0_1ins150
5 human 55722 CEP72 centrosomal protein 72 XR_925628.1 87.6% 1_18del;1960_2214del
6 human 55722 CEP72 centrosomal protein 72 XR_001742148.1 85.3% (many diffs)
7 human 55722 CEP72 centrosomal protein 72 XR_001742146.1 85% (many diffs)
8 human 55722 CEP72 centrosomal protein 72 XM_017009626.1 70.7% 70.7% 0_1ins567
9 human 55722 CEP72 centrosomal protein 72 XM_017009627.1 70.7% 70.7% 0_1ins567
10 human 55722 CEP72 centrosomal protein 72 XR_925630.2 50.6% 1_18del;1960_3831del
11 human 55722 CEP72 centrosomal protein 72 NR_164122.1 43.3% 1_22del;104_261del;2122_4475del
12 human 55722 CEP72 centrosomal protein 72 XR_925631.2 29.4% 1_18del;1557_4621del;5025_6588del
13 human 55722 CEP72 centrosomal protein 72 XR_001742149.1 27% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2007
ORF length:
1941
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc gcgggctggc cctcggctgg tgctgagcga ggaggcggtt cgggcgaaga
121gcggcttagg gcctcaccgc gacctggctg agcttcagtc attgtctatt cctggaactt
181accaagagaa gatcacccac ctgggacatt ctctgatgag tttaacaggt ctgaaatctt
241tggatctctc gcgcaactcc ttggttagtc tggagggcat tcagtacctg actgcattgg
301agagtctcaa tctctactac aactgcatct cctcgttggc agaagtgttt cggctccacg
361ccttaaccga gctcgtggat gtggacttcc ggctgaaccc cgtggtgaag gttgagcctg
421actaccgcct ttttgttgtg cacctgctcc ccaagctcca gcagctggac gatcgccccg
481tgagagcaag cgagcggaag gcttcccgac tgcattttgc atcagaggac tcactcgact
541ccaaagagag cgtcccagct tctttgaaag agggcagacc acaccacccc agagccaagt
601gcaccgaggc cttggccaag cagagcctgg tcatggatgc ggatgacgag gcagtcctga
661acctcattgc agagtgcgag tgggacctcg gcaggcctcc cgggagcacg agcttcagcc
721agaaggggcg tgaggccgac tctcgtggtt cccaagaatc cagacatctg ttgagcccgc
781agttggtaca gtaccagtgt ggggactctg ggaagcaggg ccgtgagacg aggaggagca
841gctgcagagg gtgctgtctg gagaagatgc cttggagcca gctctgtgga gagcttccgc
901cactgtacgg agcggagcca gaggcctccc gtgcccccag gccacacacg tacttcaccc
961cacacccaga ctccatggat accgaggact cggcctcttc tcagaagttg gatttgtcag
1021gagaaatggt gcctggtccc ctgccagccc ccggaaagtg caggaagcga agaatgcctg
1081ttggaagatt ccagacgttt tcggaccagg agggtttggg ctgcccggag agaactcatg
1141ggtcctccgt gcccaaggag agcctgagca gacaggacag ctcagaaagc aggaacggga
1201ggaccttgtc tcagcctgag gcctcggaga ctgaggagca gaggtctcgg ggtgtgaccg
1261acaccagaga gccgtctccc gggtcacact cggctctacc cgggaagaag acggccctgc
1321aggcggcgct cctggagacg ctcttggacc tggtggacag gagctggggc ggctgcaggt
1381ccctgcacag caacgaggca ttccttgctc aggcaagaca catcttgtca tctgttgaag
1441aattcacagc agctcaggac agctctgcga tggtgggtga agatgtcggc tccctggctc
1501tggagagtaa gtccctgcaa agccgccttg ctgagcagca gcagcagcac gcccgggaga
1561tgagcgaggt gacggcggag ctgcaccaca cacacaagga gctggatgat ttgagacaac
1621atttagataa atctttggaa gagaacagta ggttaaaatc gcttttgttg agtatgaaaa
1681aggaagtgaa gagtgcagac actgcagcca cgttaaattt gcagatcgct ggacttcaaa
1741caagtgtgaa gaggctgtgt ggcgagattg tggaactgaa gcagcacctg gagcactacg
1801acaagatcca ggagctcacg cagatgctgc aggagagcca cagctccctg gtcagcacca
1861atgaacacct gctgcaggag ctgagccagg tgcgggcgca gcacagagcc gaggtggagc
1921agatgcactg gagctaccag gagctcaaga agaccatggc cctgtttcca cacagcagcg
1981ccagccatgg aggctgccag gcctgctgcc caactttctt gtacaaagtg gttggtaagc
2041ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
2101ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)

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